RNA–Protein interactions for RNA: ENST00000579200.1

ZNF407-204, Transcript of zinc finger protein 407, humanhuman

Gene ZNF407, Length 4,390 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407-204ENST00000579200 NISCHQ9Y2I1 1504 aa23.36■■□□□ 1.33
ZNF407-204ENST00000579200 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
ZNF407-204ENST00000579200 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
ZNF407-204ENST00000579200 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
ZNF407-204ENST00000579200 ABCC9O60706 1549 aa20.44■□□□□ 0.86
ZNF407-204ENST00000579200 EHMT2Q96KQ7 1210 aa19.97■□□□□ 0.79
ZNF407-204ENST00000579200 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
ZNF407-204ENST00000579200 PELP1Q8IZL8 1130 aaKnown RBP19.87■□□□□ 0.77
ZNF407-204ENST00000579200 PCGF6Q9BYE7 350 aa19.85■□□□□ 0.77
ZNF407-204ENST00000579200 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
ZNF407-204ENST00000579200 HRCP23327 699 aa19.52■□□□□ 0.72
ZNF407-204ENST00000579200 CCDC180Q9P1Z9 1646 aa19.52■□□□□ 0.72
ZNF407-204ENST00000579200 MYT1Q01538 1121 aa19.41■□□□□ 0.7
ZNF407-204ENST00000579200 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
ZNF407-204ENST00000579200 PPARGC1BQ86YN6 1023 aaKnown RBP19.34■□□□□ 0.69
ZNF407-204ENST00000579200 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
ZNF407-204ENST00000579200 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
ZNF407-204ENST00000579200 SCRIBQ14160 1630 aa19.26■□□□□ 0.67
ZNF407-204ENST00000579200 CENPBP07199 599 aaPredicted RBP19.18■□□□□ 0.66
ZNF407-204ENST00000579200 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
ZNF407-204ENST00000579200 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
ZNF407-204ENST00000579200 TTBK1Q5TCY1 1321 aaPredicted RBP19.06■□□□□ 0.64
ZNF407-204ENST00000579200 RB1CC1Q8TDY2 1594 aa18.99■□□□□ 0.63
ZNF407-204ENST00000579200 LOC105371045A0A1W2PR82 267 aa18.94■□□□□ 0.62
ZNF407-204ENST00000579200 UBTFP17480 764 aaKnown RBP18.94■□□□□ 0.62
ZNF407-204ENST00000579200 ATP1B4Q9UN42 357 aaPredicted RBP18.88■□□□□ 0.61
ZNF407-204ENST00000579200 APLP2Q06481 763 aa18.86■□□□□ 0.61
ZNF407-204ENST00000579200 NACADO15069 1562 aa18.85■□□□□ 0.61
ZNF407-204ENST00000579200 YTHDC1Q96MU7 727 aaKnown RBP18.84■□□□□ 0.61
ZNF407-204ENST00000579200 CCER1Q8TC90 406 aaPredicted RBP18.83■□□□□ 0.61
ZNF407-204ENST00000579200 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.6
ZNF407-204ENST00000579200 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
ZNF407-204ENST00000579200 ERICH6Q7L0X2 663 aa18.56■□□□□ 0.56
ZNF407-204ENST00000579200 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
ZNF407-204ENST00000579200 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
ZNF407-204ENST00000579200 GTF3C3Q9Y5Q9 886 aa18.5■□□□□ 0.55
ZNF407-204ENST00000579200 FBLN2P98095 1184 aa18.5■□□□□ 0.55
ZNF407-204ENST00000579200 RSF1Q96T23 1441 aaPredicted RBP18.46■□□□□ 0.55
ZNF407-204ENST00000579200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.42■□□□□ 0.54
ZNF407-204ENST00000579200 HNRNPUL2Q1KMD3 747 aaKnown RBP18.42■□□□□ 0.54
ZNF407-204ENST00000579200 DIEXFQ68CQ4 756 aaKnown RBP18.34■□□□□ 0.53
ZNF407-204ENST00000579200 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
ZNF407-204ENST00000579200 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
ZNF407-204ENST00000579200 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
ZNF407-204ENST00000579200 NEFLP07196 543 aa18.22■□□□□ 0.51
ZNF407-204ENST00000579200 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
ZNF407-204ENST00000579200 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
ZNF407-204ENST00000579200 ITGAEP38570 1179 aa18.19■□□□□ 0.5
ZNF407-204ENST00000579200 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
ZNF407-204ENST00000579200 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
ZNF407-204ENST00000579200 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
ZNF407-204ENST00000579200 MYT1LQ9UL68 1186 aa18.09■□□□□ 0.49
ZNF407-204ENST00000579200 NEUROD1Q13562 356 aa18.08■□□□□ 0.48
ZNF407-204ENST00000579200 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
ZNF407-204ENST00000579200 WIZO95785 1651 aa17.92■□□□□ 0.46
ZNF407-204ENST00000579200 CHMP7Q8WUX9 453 aaPredicted RBP17.89■□□□□ 0.45
ZNF407-204ENST00000579200 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
ZNF407-204ENST00000579200 BCANQ96GW7 911 aa17.89■□□□□ 0.45
ZNF407-204ENST00000579200 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
ZNF407-204ENST00000579200 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
ZNF407-204ENST00000579200 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
ZNF407-204ENST00000579200 FAM50AQ14320 339 aaKnown RBP17.82■□□□□ 0.44
ZNF407-204ENST00000579200 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
ZNF407-204ENST00000579200 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
ZNF407-204ENST00000579200 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.43
ZNF407-204ENST00000579200 EIF4G1Q04637 1599 aaKnown RBP17.71■□□□□ 0.42
ZNF407-204ENST00000579200 CADPSQ9ULU8 1353 aa17.69■□□□□ 0.42
ZNF407-204ENST00000579200 ABCC8Q09428 1581 aa17.68■□□□□ 0.42
ZNF407-204ENST00000579200 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
ZNF407-204ENST00000579200 PDS5BQ9NTI5 1447 aa17.66■□□□□ 0.42
ZNF407-204ENST00000579200 ZNF777Q9ULD5 760 aaPredicted RBP17.66■□□□□ 0.42
ZNF407-204ENST00000579200 TDRD9Q8NDG6 1382 aaKnown RBP17.63■□□□□ 0.41
ZNF407-204ENST00000579200 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
ZNF407-204ENST00000579200 SOGA1O94964 1423 aa17.6■□□□□ 0.41
ZNF407-204ENST00000579200 KIF27Q86VH2 1401 aa17.6■□□□□ 0.41
ZNF407-204ENST00000579200 CUX2O14529 1486 aa17.59■□□□□ 0.41
ZNF407-204ENST00000579200 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
ZNF407-204ENST00000579200 NPM1P06748 294 aaKnown RBP eCLIP17.56■□□□□ 0.4
ZNF407-204ENST00000579200 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
ZNF407-204ENST00000579200 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
ZNF407-204ENST00000579200 MIER1Q8N108 512 aa17.52■□□□□ 0.4
ZNF407-204ENST00000579200 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
ZNF407-204ENST00000579200 CDK11AQ9UQ88 783 aaPredicted RBP17.5■□□□□ 0.39
ZNF407-204ENST00000579200 KCNH8Q96L42 1107 aa17.47■□□□□ 0.39
ZNF407-204ENST00000579200 FANCD2Q9BXW9 1451 aa17.47■□□□□ 0.39
ZNF407-204ENST00000579200 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
ZNF407-204ENST00000579200 ANP32EQ9BTT0 268 aa17.47■□□□□ 0.39
ZNF407-204ENST00000579200 CLIP1P30622 1438 aa17.47■□□□□ 0.39
ZNF407-204ENST00000579200 NESP48681 1621 aa17.45■□□□□ 0.38
ZNF407-204ENST00000579200 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
ZNF407-204ENST00000579200 CARMIL1Q5VZK9 1371 aa17.45■□□□□ 0.38
ZNF407-204ENST00000579200 FKBP8Q14318 412 aa17.42■□□□□ 0.38
ZNF407-204ENST00000579200 POLR3GLQ9BT43 218 aa17.41■□□□□ 0.38
ZNF407-204ENST00000579200 EEA1Q15075 1411 aa17.41■□□□□ 0.38
ZNF407-204ENST00000579200 DAXXQ9UER7 740 aaPredicted RBP17.41■□□□□ 0.38
ZNF407-204ENST00000579200 GOLGA3Q08378 1498 aa17.4■□□□□ 0.38
ZNF407-204ENST00000579200 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
ZNF407-204ENST00000579200 CLSPNQ9HAW4 1339 aa17.37■□□□□ 0.37
ZNF407-204ENST00000579200 CHIC2Q9UKJ5 165 aa17.37■□□□□ 0.37
ZNF407-204ENST00000579200 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms