RNA–Protein interactions for RNA: ENST00000578390.5

PLXDC1-212, Transcript of plexin domain containing 1, humanhuman

TSL 1 (best)

Gene PLXDC1, Length 2,859 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXDC1-212ENST00000578390 NISCHQ9Y2I1 1504 aa29.46■■■□□ 2.31
PLXDC1-212ENST00000578390 SHROOM4Q9ULL8 1493 aa26.2■■□□□ 1.78
PLXDC1-212ENST00000578390 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
PLXDC1-212ENST00000578390 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
PLXDC1-212ENST00000578390 MYO15BQ96JP2 1530 aa24.97■■□□□ 1.59
PLXDC1-212ENST00000578390 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
PLXDC1-212ENST00000578390 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
PLXDC1-212ENST00000578390 PCGF6Q9BYE7 350 aa24.74■■□□□ 1.55
PLXDC1-212ENST00000578390 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
PLXDC1-212ENST00000578390 HRCP23327 699 aa24.63■■□□□ 1.53
PLXDC1-212ENST00000578390 PPARGC1BQ86YN6 1023 aaKnown RBP24.58■■□□□ 1.53
PLXDC1-212ENST00000578390 LOC105371045A0A1W2PR82 267 aa24.51■■□□□ 1.51
PLXDC1-212ENST00000578390 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
PLXDC1-212ENST00000578390 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
PLXDC1-212ENST00000578390 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
PLXDC1-212ENST00000578390 TRIM26Q12899 539 aaPredicted RBP23.8■■□□□ 1.4
PLXDC1-212ENST00000578390 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
PLXDC1-212ENST00000578390 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
PLXDC1-212ENST00000578390 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
PLXDC1-212ENST00000578390 ABCC9O60706 1549 aa23.56■■□□□ 1.36
PLXDC1-212ENST00000578390 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
PLXDC1-212ENST00000578390 TTBK1Q5TCY1 1321 aaPredicted RBP23.34■■□□□ 1.33
PLXDC1-212ENST00000578390 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
PLXDC1-212ENST00000578390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.19■■□□□ 1.3
PLXDC1-212ENST00000578390 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
PLXDC1-212ENST00000578390 MROH2BQ7Z745 1585 aa23.13■■□□□ 1.29
PLXDC1-212ENST00000578390 SCAF1Q9H7N4 1312 aaKnown RBP23.1■■□□□ 1.29
PLXDC1-212ENST00000578390 WIZO95785 1651 aa23.03■■□□□ 1.28
PLXDC1-212ENST00000578390 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
PLXDC1-212ENST00000578390 NACADO15069 1562 aa22.83■■□□□ 1.25
PLXDC1-212ENST00000578390 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
PLXDC1-212ENST00000578390 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
PLXDC1-212ENST00000578390 CCDC88BA6NC98 1476 aa22.72■■□□□ 1.23
PLXDC1-212ENST00000578390 SOGA1O94964 1423 aa22.66■■□□□ 1.22
PLXDC1-212ENST00000578390 UBTFP17480 764 aaKnown RBP22.66■■□□□ 1.22
PLXDC1-212ENST00000578390 DIEXFQ68CQ4 756 aaKnown RBP22.64■■□□□ 1.22
PLXDC1-212ENST00000578390 BAZ1AQ9NRL2 1556 aaPredicted RBP22.61■■□□□ 1.21
PLXDC1-212ENST00000578390 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
PLXDC1-212ENST00000578390 RANGAP1P46060 587 aaPredicted RBP22.59■■□□□ 1.21
PLXDC1-212ENST00000578390 RUSC2Q8N2Y8 1516 aa22.59■■□□□ 1.21
PLXDC1-212ENST00000578390 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
PLXDC1-212ENST00000578390 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.2
PLXDC1-212ENST00000578390 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
PLXDC1-212ENST00000578390 GTF3C3Q9Y5Q9 886 aa22.54■■□□□ 1.2
PLXDC1-212ENST00000578390 YTHDC1Q96MU7 727 aaKnown RBP22.53■■□□□ 1.2
PLXDC1-212ENST00000578390 HNRNPUL2Q1KMD3 747 aaKnown RBP22.49■■□□□ 1.19
PLXDC1-212ENST00000578390 CSRNP3Q8WYN3 585 aa22.45■■□□□ 1.18
PLXDC1-212ENST00000578390 PELP1Q8IZL8 1130 aaKnown RBP22.41■■□□□ 1.18
PLXDC1-212ENST00000578390 TOP2AP11388 1531 aaKnown RBP22.4■■□□□ 1.18
PLXDC1-212ENST00000578390 SMARCA2P51531 1590 aa22.39■■□□□ 1.18
PLXDC1-212ENST00000578390 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
PLXDC1-212ENST00000578390 SMARCA4P51532 1647 aa22.36■■□□□ 1.17
PLXDC1-212ENST00000578390 TNIKQ9UKE5 1360 aa22.33■■□□□ 1.17
PLXDC1-212ENST00000578390 CENPBP07199 599 aaPredicted RBP22.32■■□□□ 1.16
PLXDC1-212ENST00000578390 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
PLXDC1-212ENST00000578390 ZNF316A6NFI3 1004 aaPredicted RBP22.27■■□□□ 1.16
PLXDC1-212ENST00000578390 MIER1Q8N108 512 aa22.22■■□□□ 1.15
PLXDC1-212ENST00000578390 GOLGA3Q08378 1498 aa22.16■■□□□ 1.14
PLXDC1-212ENST00000578390 BICRAQ9NZM4 1560 aa22.08■■□□□ 1.12
PLXDC1-212ENST00000578390 CLIP1P30622 1438 aa22.07■■□□□ 1.12
PLXDC1-212ENST00000578390 APLP2Q06481 763 aa22.07■■□□□ 1.12
PLXDC1-212ENST00000578390 SYNJ1O43426 1573 aa22.06■■□□□ 1.12
PLXDC1-212ENST00000578390 EEA1Q15075 1411 aa22.04■■□□□ 1.12
PLXDC1-212ENST00000578390 RAPGEF2Q9Y4G8 1499 aa22■■□□□ 1.11
PLXDC1-212ENST00000578390 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
PLXDC1-212ENST00000578390 ITGAEP38570 1179 aa21.91■■□□□ 1.1
PLXDC1-212ENST00000578390 VPS8Q8N3P4 1428 aa21.9■■□□□ 1.1
PLXDC1-212ENST00000578390 KANK4Q5T7N3 995 aaPredicted RBP21.87■■□□□ 1.09
PLXDC1-212ENST00000578390 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
PLXDC1-212ENST00000578390 KIF21BO75037 1637 aa21.79■■□□□ 1.08
PLXDC1-212ENST00000578390 ATAD2BQ9ULI0 1458 aa21.79■■□□□ 1.08
PLXDC1-212ENST00000578390 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
PLXDC1-212ENST00000578390 DHX57Q6P158 1386 aaKnown RBP21.69■■□□□ 1.06
PLXDC1-212ENST00000578390 KCNH8Q96L42 1107 aa21.64■■□□□ 1.06
PLXDC1-212ENST00000578390 ARAP1Q96P48 1450 aa21.62■■□□□ 1.05
PLXDC1-212ENST00000578390 TOP2BQ02880 1626 aa21.54■■□□□ 1.04
PLXDC1-212ENST00000578390 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
PLXDC1-212ENST00000578390 P3H3Q8IVL6 736 aa21.51■■□□□ 1.03
PLXDC1-212ENST00000578390 SUPT16HQ9Y5B9 1047 aaKnown RBP21.51■■□□□ 1.03
PLXDC1-212ENST00000578390 HIRIP3Q9BW71 556 aaPredicted RBP21.51■■□□□ 1.03
PLXDC1-212ENST00000578390 PRXQ9BXM0 1461 aa21.49■■□□□ 1.03
PLXDC1-212ENST00000578390 BCANQ96GW7 911 aa21.48■■□□□ 1.03
PLXDC1-212ENST00000578390 CUX1P39880 1505 aa21.45■■□□□ 1.02
PLXDC1-212ENST00000578390 SIN3AQ96ST3 1273 aa21.44■■□□□ 1.02
PLXDC1-212ENST00000578390 CCNB3Q8WWL7 1395 aa21.42■■□□□ 1.02
PLXDC1-212ENST00000578390 FAM50AQ14320 339 aaKnown RBP21.42■■□□□ 1.02
PLXDC1-212ENST00000578390 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.01
PLXDC1-212ENST00000578390 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
PLXDC1-212ENST00000578390 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
PLXDC1-212ENST00000578390 RAB3GAP2Q9H2M9 1393 aa21.38■■□□□ 1.01
PLXDC1-212ENST00000578390 BIVM-ERCC5R4GMW8 1640 aa21.36■■□□□ 1.01
PLXDC1-212ENST00000578390 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
PLXDC1-212ENST00000578390 CLSPNQ9HAW4 1339 aa21.35■■□□□ 1.01
PLXDC1-212ENST00000578390 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
PLXDC1-212ENST00000578390 CUX2O14529 1486 aa21.28■■□□□ 1
PLXDC1-212ENST00000578390 TSHZ2Q9NRE2 1034 aa21.25■□□□□ 0.99
PLXDC1-212ENST00000578390 PHLDB1Q86UU1 1377 aa21.24■□□□□ 0.99
PLXDC1-212ENST00000578390 MAPKBP1O60336 1514 aa21.22■□□□□ 0.99
PLXDC1-212ENST00000578390 TRIM52Q96A61 297 aa21.22■□□□□ 0.99
PLXDC1-212ENST00000578390 IGF1RP08069 1367 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms