RNA–Protein interactions for RNA: ENST00000578244.1

SMIM9-203, Transcript of small integral membrane protein 9, humanhuman

TSL 5

Gene SMIM9, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9-203ENST00000578244 AEBP2Q6ZN18 517 aaPredicted RBP10.71□□□□□ -0.69
SMIM9-203ENST00000578244 CHIC1Q5VXU3 224 aa9.87□□□□□ -0.83
SMIM9-203ENST00000578244 SENP3Q9H4L4 574 aaPredicted RBP9.09□□□□□ -0.95
SMIM9-203ENST00000578244 PHF23Q9BUL5 403 aaPredicted RBP8.95□□□□□ -0.98
SMIM9-203ENST00000578244 POTEDQ86YR6 584 aa8.79□□□□□ -1
SMIM9-203ENST00000578244 FOXD1Q16676 465 aa8.6□□□□□ -1.03
SMIM9-203ENST00000578244 MSH5O43196 834 aa8.12□□□□□ -1.11
SMIM9-203ENST00000578244 PIAS4Q8N2W9 510 aaPredicted RBP7.94□□□□□ -1.14
SMIM9-203ENST00000578244 PPP6R1Q9UPN7 881 aa7.73□□□□□ -1.17
SMIM9-203ENST00000578244 ADRA2BP18089 450 aa7.7□□□□□ -1.18
SMIM9-203ENST00000578244 PLPPR3Q6T4P5 718 aa7.64□□□□□ -1.19
SMIM9-203ENST00000578244 CACNB1Q02641 598 aaPredicted RBP7.32□□□□□ -1.24
SMIM9-203ENST00000578244 MAPK8IP2Q13387 824 aaPredicted RBP7.22□□□□□ -1.25
SMIM9-203ENST00000578244 DMRT2Q9Y5R5 561 aa7.15□□□□□ -1.26
SMIM9-203ENST00000578244 DCAF8L1A6NGE4 600 aa6.99□□□□□ -1.29
SMIM9-203ENST00000578244 RNF39Q9H2S5 420 aa6.94□□□□□ -1.3
SMIM9-203ENST00000578244 SCAF1Q9H7N4 1312 aaKnown RBP6.86□□□□□ -1.31
SMIM9-203ENST00000578244 DNAJC5BQ9UF47 199 aa6.84□□□□□ -1.31
SMIM9-203ENST00000578244 POTEHQ6S545 545 aa6.78□□□□□ -1.32
SMIM9-203ENST00000578244 C1QBPQ07021 282 aaKnown RBP6.75□□□□□ -1.33
SMIM9-203ENST00000578244 PPP4R3CPQ6ZMV5 832 aa6.75□□□□□ -1.33
SMIM9-203ENST00000578244 DNAJC5Q9H3Z4 198 aa6.7□□□□□ -1.34
SMIM9-203ENST00000578244 HOXD11P31277 338 aaPredicted RBP6.69□□□□□ -1.34
SMIM9-203ENST00000578244 KCNA4P22459 653 aa6.6□□□□□ -1.35
SMIM9-203ENST00000578244 ABCC9O60706 1549 aa6.59□□□□□ -1.35
SMIM9-203ENST00000578244 CNKSR2Q8WXI2 1034 aa6.54□□□□□ -1.36
SMIM9-203ENST00000578244 NCBP3Q53F19 620 aaKnown RBP6.51□□□□□ -1.37
SMIM9-203ENST00000578244 RNF216Q9NWF9 866 aaPredicted RBP6.51□□□□□ -1.37
SMIM9-203ENST00000578244 NPM3O75607 178 aaKnown RBP6.48□□□□□ -1.37
SMIM9-203ENST00000578244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMIM9-203ENST00000578244 DSG3P32926 999 aa6.37□□□□□ -1.39
SMIM9-203ENST00000578244 SPINK5Q9NQ38 1064 aaPredicted RBP6.35□□□□□ -1.39
SMIM9-203ENST00000578244 CAPN15O75808 1086 aa6.33□□□□□ -1.4
SMIM9-203ENST00000578244 U3KPZ7 1027 aaPredicted RBP6.27□□□□□ -1.41
SMIM9-203ENST00000578244 SLC4A1APQ9BWU0 796 aaKnown RBP6.24□□□□□ -1.41
SMIM9-203ENST00000578244 NISCHQ9Y2I1 1504 aa6.23□□□□□ -1.41
SMIM9-203ENST00000578244 ABCB7O75027 752 aa6.21□□□□□ -1.42
SMIM9-203ENST00000578244 TRIM41Q8WV44 630 aa6.18□□□□□ -1.42
SMIM9-203ENST00000578244 SLC4A2P04920 1241 aa6.14□□□□□ -1.43
SMIM9-203ENST00000578244 TRHP20396 242 aaPredicted RBP6.14□□□□□ -1.43
SMIM9-203ENST00000578244 SP7Q8TDD2 431 aaPredicted RBP6.14□□□□□ -1.43
SMIM9-203ENST00000578244 CHRDL2Q6WN34 429 aa6.13□□□□□ -1.43
SMIM9-203ENST00000578244 ZBTB22O15209 634 aa6.1□□□□□ -1.43
SMIM9-203ENST00000578244 EHMT2Q96KQ7 1210 aa6.08□□□□□ -1.44
SMIM9-203ENST00000578244 PABPN1Q86U42 306 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMIM9-203ENST00000578244 FOXD4L1Q9NU39 408 aa6.03□□□□□ -1.44
SMIM9-203ENST00000578244 ZNF219Q9P2Y4 722 aaPredicted RBP6.01□□□□□ -1.45
SMIM9-203ENST00000578244 RBM42Q9BTD8 480 aaKnown RBP6□□□□□ -1.45
SMIM9-203ENST00000578244 CECR2Q9BXF3 1484 aa5.98□□□□□ -1.45
SMIM9-203ENST00000578244 CSRNP3Q8WYN3 585 aa5.98□□□□□ -1.45
SMIM9-203ENST00000578244 MYCNP04198 464 aaPredicted RBP5.96□□□□□ -1.46
SMIM9-203ENST00000578244 HAX1O00165 279 aa5.92□□□□□ -1.46
SMIM9-203ENST00000578244 ILDR1Q86SU0 546 aaPredicted RBP5.91□□□□□ -1.46
SMIM9-203ENST00000578244 PIP4P2Q8N4L2 257 aa5.91□□□□□ -1.46
SMIM9-203ENST00000578244 RB1CC1Q8TDY2 1594 aa5.9□□□□□ -1.46
SMIM9-203ENST00000578244 CC2D2AQ9P2K1 1620 aa5.9□□□□□ -1.46
SMIM9-203ENST00000578244 CUX2O14529 1486 aa5.89□□□□□ -1.47
SMIM9-203ENST00000578244 APLP2Q06481 763 aa5.88□□□□□ -1.47
SMIM9-203ENST00000578244 SAMD1Q6SPF0 538 aaPredicted RBP5.88□□□□□ -1.47
SMIM9-203ENST00000578244 ATF5Q9Y2D1 282 aaPredicted RBP5.88□□□□□ -1.47
SMIM9-203ENST00000578244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.87□□□□□ -1.47
SMIM9-203ENST00000578244 EVX2Q03828 476 aa5.87□□□□□ -1.47
SMIM9-203ENST00000578244 HNRNPUL2Q1KMD3 747 aaKnown RBP5.87□□□□□ -1.47
SMIM9-203ENST00000578244 PLSCR2Q9NRY7 297 aa5.85□□□□□ -1.47
SMIM9-203ENST00000578244 CCDC180Q9P1Z9 1646 aa5.85□□□□□ -1.47
SMIM9-203ENST00000578244 POLA2Q14181 598 aa5.83□□□□□ -1.48
SMIM9-203ENST00000578244 UNC13AQ9UPW8 1703 aa5.82□□□□□ -1.48
SMIM9-203ENST00000578244 BICRAQ9NZM4 1560 aa5.81□□□□□ -1.48
SMIM9-203ENST00000578244 REM2Q8IYK8 340 aaPredicted RBP5.8□□□□□ -1.48
SMIM9-203ENST00000578244 AKT1S1Q96B36 256 aa5.79□□□□□ -1.48
SMIM9-203ENST00000578244 PITPNM1O00562 1244 aa5.78□□□□□ -1.48
SMIM9-203ENST00000578244 ATXN8OSP0DMR3 200 aa5.76□□□□□ -1.49
SMIM9-203ENST00000578244 FXR2P51116 673 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMIM9-203ENST00000578244 LHX8Q68G74 356 aa5.75□□□□□ -1.49
SMIM9-203ENST00000578244 OSCARQ8IYS5 282 aa5.73□□□□□ -1.49
SMIM9-203ENST00000578244 EIF4G1Q04637 1599 aaKnown RBP5.71□□□□□ -1.5
SMIM9-203ENST00000578244 ERCC6Q03468 1493 aa5.71□□□□□ -1.5
SMIM9-203ENST00000578244 NACADO15069 1562 aa5.69□□□□□ -1.5
SMIM9-203ENST00000578244 GABBR2O75899 941 aa5.64□□□□□ -1.51
SMIM9-203ENST00000578244 DCAF8L2P0C7V8 631 aa5.62□□□□□ -1.51
SMIM9-203ENST00000578244 PRKAR2AP13861 404 aaKnown RBP5.61□□□□□ -1.51
SMIM9-203ENST00000578244 MKRN4PQ13434 485 aaPredicted RBP5.6□□□□□ -1.51
SMIM9-203ENST00000578244 C19orf67A6NJJ6 358 aa5.59□□□□□ -1.51
SMIM9-203ENST00000578244 POTEIP0CG38 1075 aa5.57□□□□□ -1.52
SMIM9-203ENST00000578244 ZBTB12Q9Y330 459 aaPredicted RBP5.57□□□□□ -1.52
SMIM9-203ENST00000578244 RIMBP3CA6NJZ7 1639 aa5.56□□□□□ -1.52
SMIM9-203ENST00000578244 RIMBP3BA6NNM3 1639 aa5.56□□□□□ -1.52
SMIM9-203ENST00000578244 RIMBP3Q9UFD9 1639 aa5.56□□□□□ -1.52
SMIM9-203ENST00000578244 FBLN2P98095 1184 aa5.55□□□□□ -1.52
SMIM9-203ENST00000578244 SHROOM4Q9ULL8 1493 aa5.55□□□□□ -1.52
SMIM9-203ENST00000578244 CLEC11AQ9Y240 323 aa5.53□□□□□ -1.52
SMIM9-203ENST00000578244 THOC2Q8NI27 1593 aaKnown RBP5.52□□□□□ -1.53
SMIM9-203ENST00000578244 CHADLQ6NUI6 762 aa5.52□□□□□ -1.53
SMIM9-203ENST00000578244 LMTK3Q96Q04 1460 aa5.51□□□□□ -1.53
SMIM9-203ENST00000578244 BAZ1AQ9NRL2 1556 aaPredicted RBP5.5□□□□□ -1.53
SMIM9-203ENST00000578244 SOCS7O14512 581 aa5.5□□□□□ -1.53
SMIM9-203ENST00000578244 CYB5RLQ6IPT4 315 aa5.49□□□□□ -1.53
SMIM9-203ENST00000578244 ILDR2Q71H61 639 aa5.49□□□□□ -1.53
SMIM9-203ENST00000578244 NESP48681 1621 aa5.48□□□□□ -1.53
SMIM9-203ENST00000578244 POTEMA6NI47 508 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms