RNA–Protein interactions for RNA: ENST00000573539.5

TRPV3-206, Transcript of transient receptor potential cation channel subfamily V member 3, humanhuman

TSL 1 (best)

Gene TRPV3, Length 2,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV3-206ENST00000573539 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
TRPV3-206ENST00000573539 SHROOM4Q9ULL8 1493 aa22.1■■□□□ 1.13
TRPV3-206ENST00000573539 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
TRPV3-206ENST00000573539 ZCCHC6Q5VYS8 1495 aaKnown RBP21.56■■□□□ 1.04
TRPV3-206ENST00000573539 CCDC180Q9P1Z9 1646 aa21.45■■□□□ 1.03
TRPV3-206ENST00000573539 DCAF8L2P0C7V8 631 aa21.38■■□□□ 1.01
TRPV3-206ENST00000573539 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
TRPV3-206ENST00000573539 MYO15BQ96JP2 1530 aa21.07■□□□□ 0.96
TRPV3-206ENST00000573539 DCAF1Q9Y4B6 1507 aa20.76■□□□□ 0.91
TRPV3-206ENST00000573539 PCGF6Q9BYE7 350 aa20.67■□□□□ 0.9
TRPV3-206ENST00000573539 HRCP23327 699 aa20.65■□□□□ 0.9
TRPV3-206ENST00000573539 LOC105371045A0A1W2PR82 267 aa20.59■□□□□ 0.89
TRPV3-206ENST00000573539 PPARGC1BQ86YN6 1023 aaKnown RBP20.38■□□□□ 0.85
TRPV3-206ENST00000573539 ABCC9O60706 1549 aa20.36■□□□□ 0.85
TRPV3-206ENST00000573539 SCRIBQ14160 1630 aa20.36■□□□□ 0.85
TRPV3-206ENST00000573539 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
TRPV3-206ENST00000573539 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
TRPV3-206ENST00000573539 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
TRPV3-206ENST00000573539 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
TRPV3-206ENST00000573539 TRIM26Q12899 539 aaPredicted RBP20.11■□□□□ 0.81
TRPV3-206ENST00000573539 EHMT2Q96KQ7 1210 aa20.05■□□□□ 0.8
TRPV3-206ENST00000573539 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
TRPV3-206ENST00000573539 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
TRPV3-206ENST00000573539 NACADO15069 1562 aa19.85■□□□□ 0.77
TRPV3-206ENST00000573539 WIZO95785 1651 aa19.79■□□□□ 0.76
TRPV3-206ENST00000573539 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
TRPV3-206ENST00000573539 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
TRPV3-206ENST00000573539 EIF4G1Q04637 1599 aaKnown RBP19.48■□□□□ 0.71
TRPV3-206ENST00000573539 ABCC8Q09428 1581 aa19.45■□□□□ 0.7
TRPV3-206ENST00000573539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.42■□□□□ 0.7
TRPV3-206ENST00000573539 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
TRPV3-206ENST00000573539 CCDC88BA6NC98 1476 aa19.41■□□□□ 0.7
TRPV3-206ENST00000573539 TOP2AP11388 1531 aaKnown RBP19.38■□□□□ 0.69
TRPV3-206ENST00000573539 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
TRPV3-206ENST00000573539 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
TRPV3-206ENST00000573539 CCER1Q8TC90 406 aaPredicted RBP19.31■□□□□ 0.68
TRPV3-206ENST00000573539 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
TRPV3-206ENST00000573539 SOGA1O94964 1423 aa19.31■□□□□ 0.68
TRPV3-206ENST00000573539 PABPN1Q86U42 306 aaKnown RBP eCLIP19.28■□□□□ 0.68
TRPV3-206ENST00000573539 CEP162Q5TB80 1403 aa19.23■□□□□ 0.67
TRPV3-206ENST00000573539 RUSC2Q8N2Y8 1516 aa19.23■□□□□ 0.67
TRPV3-206ENST00000573539 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
TRPV3-206ENST00000573539 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
TRPV3-206ENST00000573539 CSRNP3Q8WYN3 585 aa19.17■□□□□ 0.66
TRPV3-206ENST00000573539 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
TRPV3-206ENST00000573539 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
TRPV3-206ENST00000573539 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
TRPV3-206ENST00000573539 EEA1Q15075 1411 aa19.03■□□□□ 0.64
TRPV3-206ENST00000573539 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
TRPV3-206ENST00000573539 DIEXFQ68CQ4 756 aaKnown RBP18.99■□□□□ 0.63
TRPV3-206ENST00000573539 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
TRPV3-206ENST00000573539 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
TRPV3-206ENST00000573539 RANGAP1P46060 587 aaPredicted RBP18.92■□□□□ 0.62
TRPV3-206ENST00000573539 PEG3Q9GZU2 1588 aa18.9■□□□□ 0.62
TRPV3-206ENST00000573539 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.62
TRPV3-206ENST00000573539 ACIN1Q9UKV3 1341 aaKnown RBP18.89■□□□□ 0.61
TRPV3-206ENST00000573539 ATAD2BQ9ULI0 1458 aa18.87■□□□□ 0.61
TRPV3-206ENST00000573539 CEP164Q9UPV0 1460 aa18.86■□□□□ 0.61
TRPV3-206ENST00000573539 CLIP1P30622 1438 aa18.84■□□□□ 0.61
TRPV3-206ENST00000573539 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.61
TRPV3-206ENST00000573539 RAPGEF2Q9Y4G8 1499 aa18.8■□□□□ 0.6
TRPV3-206ENST00000573539 KIF21BO75037 1637 aa18.79■□□□□ 0.6
TRPV3-206ENST00000573539 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.59
TRPV3-206ENST00000573539 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
TRPV3-206ENST00000573539 VPS8Q8N3P4 1428 aa18.73■□□□□ 0.59
TRPV3-206ENST00000573539 APLP2Q06481 763 aa18.72■□□□□ 0.59
TRPV3-206ENST00000573539 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
TRPV3-206ENST00000573539 PELP1Q8IZL8 1130 aaKnown RBP18.7■□□□□ 0.58
TRPV3-206ENST00000573539 YTHDC1Q96MU7 727 aaKnown RBP18.66■□□□□ 0.58
TRPV3-206ENST00000573539 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
TRPV3-206ENST00000573539 MIER1Q8N108 512 aa18.61■□□□□ 0.57
TRPV3-206ENST00000573539 KANK4Q5T7N3 995 aaPredicted RBP18.54■□□□□ 0.56
TRPV3-206ENST00000573539 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.55
TRPV3-206ENST00000573539 PRXQ9BXM0 1461 aa18.52■□□□□ 0.55
TRPV3-206ENST00000573539 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
TRPV3-206ENST00000573539 CUX1P39880 1505 aa18.48■□□□□ 0.55
TRPV3-206ENST00000573539 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
TRPV3-206ENST00000573539 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
TRPV3-206ENST00000573539 DHX57Q6P158 1386 aaKnown RBP18.42■□□□□ 0.54
TRPV3-206ENST00000573539 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
TRPV3-206ENST00000573539 HMGXB3Q12766 1538 aa18.38■□□□□ 0.53
TRPV3-206ENST00000573539 ITGAEP38570 1179 aa18.38■□□□□ 0.53
TRPV3-206ENST00000573539 CFTRP13569 1480 aa18.34■□□□□ 0.53
TRPV3-206ENST00000573539 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.52
TRPV3-206ENST00000573539 RRBP1Q9P2E9 1410 aaKnown RBP18.3■□□□□ 0.52
TRPV3-206ENST00000573539 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
TRPV3-206ENST00000573539 CCNB3Q8WWL7 1395 aa18.27■□□□□ 0.52
TRPV3-206ENST00000573539 CUX2O14529 1486 aa18.26■□□□□ 0.51
TRPV3-206ENST00000573539 IGF1RP08069 1367 aa18.24■□□□□ 0.51
TRPV3-206ENST00000573539 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
TRPV3-206ENST00000573539 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
TRPV3-206ENST00000573539 RAB3GAP2Q9H2M9 1393 aa18.16■□□□□ 0.5
TRPV3-206ENST00000573539 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
TRPV3-206ENST00000573539 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
TRPV3-206ENST00000573539 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
TRPV3-206ENST00000573539 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
TRPV3-206ENST00000573539 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
TRPV3-206ENST00000573539 PHLDB1Q86UU1 1377 aa18.1■□□□□ 0.49
TRPV3-206ENST00000573539 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
TRPV3-206ENST00000573539 MAPKBP1O60336 1514 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms