RNA–Protein interactions for RNA: ENST00000573536.1

ZZEF1-208, Transcript of zinc finger ZZ-type and EF-hand domain containing 1, humanhuman

TSL 2

Gene ZZEF1, Length 3,190 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZZEF1-208ENST00000573536 NISCHQ9Y2I1 1504 aa24.97■■□□□ 1.59
ZZEF1-208ENST00000573536 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
ZZEF1-208ENST00000573536 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
ZZEF1-208ENST00000573536 DCAF8L2P0C7V8 631 aa21.46■■□□□ 1.03
ZZEF1-208ENST00000573536 ZCCHC6Q5VYS8 1495 aaKnown RBP21.07■□□□□ 0.96
ZZEF1-208ENST00000573536 CCDC180Q9P1Z9 1646 aa20.99■□□□□ 0.95
ZZEF1-208ENST00000573536 CHIC1Q5VXU3 224 aa20.69■□□□□ 0.9
ZZEF1-208ENST00000573536 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
ZZEF1-208ENST00000573536 PCGF6Q9BYE7 350 aa20.38■□□□□ 0.85
ZZEF1-208ENST00000573536 LOC105371045A0A1W2PR82 267 aa20.29■□□□□ 0.84
ZZEF1-208ENST00000573536 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
ZZEF1-208ENST00000573536 HRCP23327 699 aa20.18■□□□□ 0.82
ZZEF1-208ENST00000573536 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
ZZEF1-208ENST00000573536 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
ZZEF1-208ENST00000573536 FAM9AQ8IZU1 332 aaPredicted RBP20.02■□□□□ 0.8
ZZEF1-208ENST00000573536 PPARGC1BQ86YN6 1023 aaKnown RBP19.99■□□□□ 0.79
ZZEF1-208ENST00000573536 TRIM41Q8WV44 630 aa19.94■□□□□ 0.78
ZZEF1-208ENST00000573536 ABCC9O60706 1549 aa19.92■□□□□ 0.78
ZZEF1-208ENST00000573536 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
ZZEF1-208ENST00000573536 TRIM26Q12899 539 aaPredicted RBP19.75■□□□□ 0.75
ZZEF1-208ENST00000573536 RB1CC1Q8TDY2 1594 aa19.71■□□□□ 0.75
ZZEF1-208ENST00000573536 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.73
ZZEF1-208ENST00000573536 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
ZZEF1-208ENST00000573536 NACADO15069 1562 aa19.51■□□□□ 0.71
ZZEF1-208ENST00000573536 WIZO95785 1651 aa19.43■□□□□ 0.7
ZZEF1-208ENST00000573536 TTBK1Q5TCY1 1321 aaPredicted RBP19.39■□□□□ 0.7
ZZEF1-208ENST00000573536 ZEB1P37275 1124 aaPredicted RBP19.29■□□□□ 0.68
ZZEF1-208ENST00000573536 PABPN1Q86U42 306 aaKnown RBP eCLIP19.23■□□□□ 0.67
ZZEF1-208ENST00000573536 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
ZZEF1-208ENST00000573536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.16■□□□□ 0.66
ZZEF1-208ENST00000573536 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
ZZEF1-208ENST00000573536 ABCC8Q09428 1581 aa19.13■□□□□ 0.65
ZZEF1-208ENST00000573536 UBTFP17480 764 aaKnown RBP19.09■□□□□ 0.65
ZZEF1-208ENST00000573536 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
ZZEF1-208ENST00000573536 SMARCA4P51532 1647 aa19■□□□□ 0.63
ZZEF1-208ENST00000573536 TOP2AP11388 1531 aaKnown RBP19■□□□□ 0.63
ZZEF1-208ENST00000573536 SOGA1O94964 1423 aa18.97■□□□□ 0.63
ZZEF1-208ENST00000573536 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
ZZEF1-208ENST00000573536 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
ZZEF1-208ENST00000573536 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
ZZEF1-208ENST00000573536 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
ZZEF1-208ENST00000573536 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.61
ZZEF1-208ENST00000573536 CEP162Q5TB80 1403 aa18.89■□□□□ 0.61
ZZEF1-208ENST00000573536 RUSC2Q8N2Y8 1516 aa18.87■□□□□ 0.61
ZZEF1-208ENST00000573536 TNIKQ9UKE5 1360 aa18.75■□□□□ 0.59
ZZEF1-208ENST00000573536 HNRNPUL2Q1KMD3 747 aaKnown RBP18.75■□□□□ 0.59
ZZEF1-208ENST00000573536 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
ZZEF1-208ENST00000573536 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
ZZEF1-208ENST00000573536 APLP2Q06481 763 aa18.69■□□□□ 0.58
ZZEF1-208ENST00000573536 DIEXFQ68CQ4 756 aaKnown RBP18.69■□□□□ 0.58
ZZEF1-208ENST00000573536 GOLGA3Q08378 1498 aa18.68■□□□□ 0.58
ZZEF1-208ENST00000573536 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
ZZEF1-208ENST00000573536 EEA1Q15075 1411 aa18.67■□□□□ 0.58
ZZEF1-208ENST00000573536 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
ZZEF1-208ENST00000573536 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
ZZEF1-208ENST00000573536 CLIP1P30622 1438 aa18.56■□□□□ 0.56
ZZEF1-208ENST00000573536 ATAD2BQ9ULI0 1458 aa18.55■□□□□ 0.56
ZZEF1-208ENST00000573536 CEP164Q9UPV0 1460 aa18.54■□□□□ 0.56
ZZEF1-208ENST00000573536 YTHDC1Q96MU7 727 aaKnown RBP18.52■□□□□ 0.56
ZZEF1-208ENST00000573536 NEUROD1Q13562 356 aa18.52■□□□□ 0.56
ZZEF1-208ENST00000573536 ACIN1Q9UKV3 1341 aaKnown RBP18.48■□□□□ 0.55
ZZEF1-208ENST00000573536 CENPBP07199 599 aaPredicted RBP18.47■□□□□ 0.55
ZZEF1-208ENST00000573536 RAPGEF2Q9Y4G8 1499 aa18.47■□□□□ 0.55
ZZEF1-208ENST00000573536 ZNF316A6NFI3 1004 aaPredicted RBP18.45■□□□□ 0.54
ZZEF1-208ENST00000573536 PEG3Q9GZU2 1588 aa18.43■□□□□ 0.54
ZZEF1-208ENST00000573536 GTF3C3Q9Y5Q9 886 aa18.4■□□□□ 0.54
ZZEF1-208ENST00000573536 VPS8Q8N3P4 1428 aa18.39■□□□□ 0.53
ZZEF1-208ENST00000573536 KIF21BO75037 1637 aa18.36■□□□□ 0.53
ZZEF1-208ENST00000573536 ITGAEP38570 1179 aa18.34■□□□□ 0.53
ZZEF1-208ENST00000573536 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
ZZEF1-208ENST00000573536 MIER1Q8N108 512 aa18.26■□□□□ 0.51
ZZEF1-208ENST00000573536 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
ZZEF1-208ENST00000573536 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
ZZEF1-208ENST00000573536 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
ZZEF1-208ENST00000573536 KIF27Q86VH2 1401 aa18.17■□□□□ 0.5
ZZEF1-208ENST00000573536 CUX1P39880 1505 aa18.13■□□□□ 0.49
ZZEF1-208ENST00000573536 P3H3Q8IVL6 736 aa18.12■□□□□ 0.49
ZZEF1-208ENST00000573536 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
ZZEF1-208ENST00000573536 PRXQ9BXM0 1461 aa18.11■□□□□ 0.49
ZZEF1-208ENST00000573536 NCAPD3P42695 1498 aa18.09■□□□□ 0.49
ZZEF1-208ENST00000573536 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
ZZEF1-208ENST00000573536 ERICH3Q5RHP9 1530 aa18.05■□□□□ 0.48
ZZEF1-208ENST00000573536 CUX2O14529 1486 aa18.05■□□□□ 0.48
ZZEF1-208ENST00000573536 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
ZZEF1-208ENST00000573536 HMGXB3Q12766 1538 aa18.03■□□□□ 0.48
ZZEF1-208ENST00000573536 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
ZZEF1-208ENST00000573536 CFTRP13569 1480 aa18.01■□□□□ 0.47
ZZEF1-208ENST00000573536 CCNB3Q8WWL7 1395 aa17.98■□□□□ 0.47
ZZEF1-208ENST00000573536 ARHGAP35Q9NRY4 1499 aa17.97■□□□□ 0.47
ZZEF1-208ENST00000573536 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
ZZEF1-208ENST00000573536 IGF1RP08069 1367 aa17.93■□□□□ 0.46
ZZEF1-208ENST00000573536 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
ZZEF1-208ENST00000573536 CLSPNQ9HAW4 1339 aa17.9■□□□□ 0.46
ZZEF1-208ENST00000573536 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
ZZEF1-208ENST00000573536 RRBP1Q9P2E9 1410 aaKnown RBP17.87■□□□□ 0.45
ZZEF1-208ENST00000573536 RAB3GAP2Q9H2M9 1393 aa17.86■□□□□ 0.45
ZZEF1-208ENST00000573536 SIN3AQ96ST3 1273 aa17.83■□□□□ 0.44
ZZEF1-208ENST00000573536 HIRIP3Q9BW71 556 aaPredicted RBP17.79■□□□□ 0.44
ZZEF1-208ENST00000573536 RAD54L2Q9Y4B4 1467 aa17.78■□□□□ 0.44
ZZEF1-208ENST00000573536 FHOD3Q2V2M9 1422 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms