RNA–Protein interactions for RNA: ENST00000573251.5

RSL1D1-208, Transcript of ribosomal L1 domain containing 1, humanhuman

TSL 3

Gene RSL1D1, Length 894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSL1D1-208ENST00000573251 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
RSL1D1-208ENST00000573251 CHIC1Q5VXU3 224 aa26.51■■□□□ 1.83
RSL1D1-208ENST00000573251 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
RSL1D1-208ENST00000573251 SENP3Q9H4L4 574 aaPredicted RBP22.85■■□□□ 1.25
RSL1D1-208ENST00000573251 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
RSL1D1-208ENST00000573251 FOXD1Q16676 465 aa21.18■□□□□ 0.98
RSL1D1-208ENST00000573251 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
RSL1D1-208ENST00000573251 ADRA2BP18089 450 aa20.54■□□□□ 0.88
RSL1D1-208ENST00000573251 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
RSL1D1-208ENST00000573251 PIAS4Q8N2W9 510 aaPredicted RBP20.05■□□□□ 0.8
RSL1D1-208ENST00000573251 MSH5O43196 834 aa19.47■□□□□ 0.71
RSL1D1-208ENST00000573251 PPP4R3CPQ6ZMV5 832 aa19.08■□□□□ 0.64
RSL1D1-208ENST00000573251 KCNA4P22459 653 aa18.86■□□□□ 0.61
RSL1D1-208ENST00000573251 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
RSL1D1-208ENST00000573251 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
RSL1D1-208ENST00000573251 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
RSL1D1-208ENST00000573251 MAPK8IP2Q13387 824 aaPredicted RBP18.57■□□□□ 0.56
RSL1D1-208ENST00000573251 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
RSL1D1-208ENST00000573251 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
RSL1D1-208ENST00000573251 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
RSL1D1-208ENST00000573251 ABCC9O60706 1549 aa18.18■□□□□ 0.5
RSL1D1-208ENST00000573251 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
RSL1D1-208ENST00000573251 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
RSL1D1-208ENST00000573251 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
RSL1D1-208ENST00000573251 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
RSL1D1-208ENST00000573251 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
RSL1D1-208ENST00000573251 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
RSL1D1-208ENST00000573251 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.4
RSL1D1-208ENST00000573251 NACADO15069 1562 aa17.49■□□□□ 0.39
RSL1D1-208ENST00000573251 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
RSL1D1-208ENST00000573251 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
RSL1D1-208ENST00000573251 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
RSL1D1-208ENST00000573251 ZBTB22O15209 634 aa17.35■□□□□ 0.37
RSL1D1-208ENST00000573251 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
RSL1D1-208ENST00000573251 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
RSL1D1-208ENST00000573251 SLC4A2P04920 1241 aa17.27■□□□□ 0.36
RSL1D1-208ENST00000573251 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
RSL1D1-208ENST00000573251 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
RSL1D1-208ENST00000573251 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.34
RSL1D1-208ENST00000573251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.342e-7■■□□□ 12.3
RSL1D1-208ENST00000573251 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.31
RSL1D1-208ENST00000573251 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
RSL1D1-208ENST00000573251 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
RSL1D1-208ENST00000573251 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
RSL1D1-208ENST00000573251 SCRIBQ14160 1630 aa16.86■□□□□ 0.29
RSL1D1-208ENST00000573251 SHROOM4Q9ULL8 1493 aa16.85■□□□□ 0.29
RSL1D1-208ENST00000573251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
RSL1D1-208ENST00000573251 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
RSL1D1-208ENST00000573251 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
RSL1D1-208ENST00000573251 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
RSL1D1-208ENST00000573251 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
RSL1D1-208ENST00000573251 EIF4G1Q04637 1599 aaKnown RBP16.56■□□□□ 0.24
RSL1D1-208ENST00000573251 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
RSL1D1-208ENST00000573251 APLP2Q06481 763 aa16.53■□□□□ 0.24
RSL1D1-208ENST00000573251 C1QBPQ07021 282 aaKnown RBP16.5■□□□□ 0.23
RSL1D1-208ENST00000573251 ATF5Q9Y2D1 282 aaPredicted RBP16.5■□□□□ 0.23
RSL1D1-208ENST00000573251 CECR2Q9BXF3 1484 aa16.39■□□□□ 0.21
RSL1D1-208ENST00000573251 SPINK5Q9NQ38 1064 aaPredicted RBP16.35■□□□□ 0.21
RSL1D1-208ENST00000573251 CAPN15O75808 1086 aa16.3■□□□□ 0.2
RSL1D1-208ENST00000573251 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
RSL1D1-208ENST00000573251 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
RSL1D1-208ENST00000573251 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
RSL1D1-208ENST00000573251 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
RSL1D1-208ENST00000573251 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
RSL1D1-208ENST00000573251 NCAPD3P42695 1498 aa16.09■□□□□ 0.17
RSL1D1-208ENST00000573251 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
RSL1D1-208ENST00000573251 ATAD2BQ9ULI0 1458 aa16.05■□□□□ 0.16
RSL1D1-208ENST00000573251 POLA2Q14181 598 aa16.04■□□□□ 0.16
RSL1D1-208ENST00000573251 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
RSL1D1-208ENST00000573251 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
RSL1D1-208ENST00000573251 ABCB7O75027 752 aa16■□□□□ 0.15
RSL1D1-208ENST00000573251 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
RSL1D1-208ENST00000573251 DSG3P32926 999 aa15.95■□□□□ 0.14
RSL1D1-208ENST00000573251 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
RSL1D1-208ENST00000573251 WIZO95785 1651 aa15.85■□□□□ 0.13
RSL1D1-208ENST00000573251 FBLN2P98095 1184 aa15.82■□□□□ 0.12
RSL1D1-208ENST00000573251 ZBTB12Q9Y330 459 aaPredicted RBP15.79■□□□□ 0.12
RSL1D1-208ENST00000573251 MKRN4PQ13434 485 aaPredicted RBP15.78■□□□□ 0.12
RSL1D1-208ENST00000573251 FKBP8Q14318 412 aa15.76■□□□□ 0.11
RSL1D1-208ENST00000573251 LAMC3Q9Y6N6 1575 aa15.75■□□□□ 0.11
RSL1D1-208ENST00000573251 NESP48681 1621 aa15.71■□□□□ 0.11
RSL1D1-208ENST00000573251 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
RSL1D1-208ENST00000573251 KIF21AQ7Z4S6 1674 aa15.68■□□□□ 0.1
RSL1D1-208ENST00000573251 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
RSL1D1-208ENST00000573251 CUX2O14529 1486 aa15.65■□□□□ 0.1
RSL1D1-208ENST00000573251 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
RSL1D1-208ENST00000573251 PRDM2Q13029 1718 aa15.61■□□□□ 0.09
RSL1D1-208ENST00000573251 THOC2Q8NI27 1593 aaKnown RBP15.61■□□□□ 0.09
RSL1D1-208ENST00000573251 CADPSQ9ULU8 1353 aa15.57■□□□□ 0.08
RSL1D1-208ENST00000573251 PDS5BQ9NTI5 1447 aa15.57■□□□□ 0.08
RSL1D1-208ENST00000573251 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
RSL1D1-208ENST00000573251 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
RSL1D1-208ENST00000573251 CFTRP13569 1480 aa15.47■□□□□ 0.07
RSL1D1-208ENST00000573251 WDR62O43379 1518 aa15.43■□□□□ 0.06
RSL1D1-208ENST00000573251 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
RSL1D1-208ENST00000573251 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
RSL1D1-208ENST00000573251 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
RSL1D1-208ENST00000573251 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
RSL1D1-208ENST00000573251 SPDYE2BA6NHP3 402 aa15.37■□□□□ 0.05
RSL1D1-208ENST00000573251 SPDYE6P0CI01 402 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms