RNA–Protein interactions for RNA: ENST00000571139.5

TRPV3-204, Transcript of transient receptor potential cation channel subfamily V member 3, humanhuman

TSL 1 (best)

Gene TRPV3, Length 2,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV3-204ENST00000571139 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
TRPV3-204ENST00000571139 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
TRPV3-204ENST00000571139 SUPT5HO00267 1087 aaKnown RBP19.75■□□□□ 0.75
TRPV3-204ENST00000571139 HRCP23327 699 aa19.69■□□□□ 0.74
TRPV3-204ENST00000571139 PELP1Q8IZL8 1130 aaKnown RBP19.58■□□□□ 0.73
TRPV3-204ENST00000571139 PPARGC1BQ86YN6 1023 aaKnown RBP19.5■□□□□ 0.71
TRPV3-204ENST00000571139 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
TRPV3-204ENST00000571139 PCGF6Q9BYE7 350 aa19.46■□□□□ 0.71
TRPV3-204ENST00000571139 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
TRPV3-204ENST00000571139 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
TRPV3-204ENST00000571139 MYT1Q01538 1121 aa19■□□□□ 0.63
TRPV3-204ENST00000571139 LOC105371045A0A1W2PR82 267 aa18.96■□□□□ 0.63
TRPV3-204ENST00000571139 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
TRPV3-204ENST00000571139 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
TRPV3-204ENST00000571139 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
TRPV3-204ENST00000571139 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
TRPV3-204ENST00000571139 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
TRPV3-204ENST00000571139 ABCC9O60706 1549 aa18.55■□□□□ 0.56
TRPV3-204ENST00000571139 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
TRPV3-204ENST00000571139 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
TRPV3-204ENST00000571139 FAM9AQ8IZU1 332 aaPredicted RBP18.31■□□□□ 0.52
TRPV3-204ENST00000571139 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
TRPV3-204ENST00000571139 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
TRPV3-204ENST00000571139 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.5
TRPV3-204ENST00000571139 NACADO15069 1562 aa18.13■□□□□ 0.49
TRPV3-204ENST00000571139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
TRPV3-204ENST00000571139 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
TRPV3-204ENST00000571139 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
TRPV3-204ENST00000571139 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
TRPV3-204ENST00000571139 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
TRPV3-204ENST00000571139 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
TRPV3-204ENST00000571139 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
TRPV3-204ENST00000571139 DIEXFQ68CQ4 756 aaKnown RBP17.92■□□□□ 0.46
TRPV3-204ENST00000571139 CENPBP07199 599 aaPredicted RBP17.85■□□□□ 0.45
TRPV3-204ENST00000571139 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.43
TRPV3-204ENST00000571139 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
TRPV3-204ENST00000571139 UNC13AQ9UPW8 1703 aa17.62■□□□□ 0.41
TRPV3-204ENST00000571139 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRPV3-204ENST00000571139 ZNF316A6NFI3 1004 aaPredicted RBP17.56■□□□□ 0.4
TRPV3-204ENST00000571139 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
TRPV3-204ENST00000571139 MIER1Q8N108 512 aa17.54■□□□□ 0.4
TRPV3-204ENST00000571139 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
TRPV3-204ENST00000571139 BICRAQ9NZM4 1560 aa17.45■□□□□ 0.38
TRPV3-204ENST00000571139 WIZO95785 1651 aa17.43■□□□□ 0.38
TRPV3-204ENST00000571139 CEP162Q5TB80 1403 aa17.39■□□□□ 0.38
TRPV3-204ENST00000571139 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
TRPV3-204ENST00000571139 HNRNPUL2Q1KMD3 747 aaKnown RBP17.35■□□□□ 0.37
TRPV3-204ENST00000571139 PRKCSHP14314 528 aaPredicted RBP17.34■□□□□ 0.37
TRPV3-204ENST00000571139 ABCC8Q09428 1581 aa17.34■□□□□ 0.37
TRPV3-204ENST00000571139 CCDC88BA6NC98 1476 aa17.33■□□□□ 0.36
TRPV3-204ENST00000571139 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.36
TRPV3-204ENST00000571139 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
TRPV3-204ENST00000571139 SOGA1O94964 1423 aa17.29■□□□□ 0.36
TRPV3-204ENST00000571139 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
TRPV3-204ENST00000571139 UBTFP17480 764 aaKnown RBP17.27■□□□□ 0.36
TRPV3-204ENST00000571139 SMARCA4P51532 1647 aa17.23■□□□□ 0.35
TRPV3-204ENST00000571139 RUSC2Q8N2Y8 1516 aa17.22■□□□□ 0.35
TRPV3-204ENST00000571139 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
TRPV3-204ENST00000571139 SUPT16HQ9Y5B9 1047 aaKnown RBP17.18■□□□□ 0.34
TRPV3-204ENST00000571139 CSRNP3Q8WYN3 585 aa17.14■□□□□ 0.33
TRPV3-204ENST00000571139 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
TRPV3-204ENST00000571139 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
TRPV3-204ENST00000571139 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
TRPV3-204ENST00000571139 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
TRPV3-204ENST00000571139 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
TRPV3-204ENST00000571139 ERICH6Q7L0X2 663 aa16.98■□□□□ 0.31
TRPV3-204ENST00000571139 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
TRPV3-204ENST00000571139 BCANQ96GW7 911 aa16.98■□□□□ 0.31
TRPV3-204ENST00000571139 KCNH8Q96L42 1107 aa16.97■□□□□ 0.31
TRPV3-204ENST00000571139 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
TRPV3-204ENST00000571139 CLIP1P30622 1438 aa16.93■□□□□ 0.3
TRPV3-204ENST00000571139 EEA1Q15075 1411 aa16.93■□□□□ 0.3
TRPV3-204ENST00000571139 CLSPNQ9HAW4 1339 aa16.93■□□□□ 0.3
TRPV3-204ENST00000571139 APLP2Q06481 763 aa16.9■□□□□ 0.3
TRPV3-204ENST00000571139 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
TRPV3-204ENST00000571139 DHX57Q6P158 1386 aaKnown RBP16.88■□□□□ 0.29
TRPV3-204ENST00000571139 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
TRPV3-204ENST00000571139 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.28
TRPV3-204ENST00000571139 RAPGEF2Q9Y4G8 1499 aa16.79■□□□□ 0.28
TRPV3-204ENST00000571139 FKBP8Q14318 412 aa16.79■□□□□ 0.28
TRPV3-204ENST00000571139 NCAPD3P42695 1498 aa16.77■□□□□ 0.27
TRPV3-204ENST00000571139 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
TRPV3-204ENST00000571139 KIF21BO75037 1637 aa16.75■□□□□ 0.27
TRPV3-204ENST00000571139 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
TRPV3-204ENST00000571139 ITGAEP38570 1179 aa16.73■□□□□ 0.27
TRPV3-204ENST00000571139 HMGXB3Q12766 1538 aa16.71■□□□□ 0.27
TRPV3-204ENST00000571139 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.27
TRPV3-204ENST00000571139 RBM19Q9Y4C8 960 aaKnown RBP16.69■□□□□ 0.26
TRPV3-204ENST00000571139 DDX10Q13206 875 aaKnown RBP16.65■□□□□ 0.26
TRPV3-204ENST00000571139 TRIM52Q96A61 297 aa16.62■□□□□ 0.25
TRPV3-204ENST00000571139 HIRIP3Q9BW71 556 aaPredicted RBP16.61■□□□□ 0.25
TRPV3-204ENST00000571139 MSH5O43196 834 aa16.59■□□□□ 0.25
TRPV3-204ENST00000571139 ARAP1Q96P48 1450 aa16.58■□□□□ 0.25
TRPV3-204ENST00000571139 NEFLP07196 543 aa16.54■□□□□ 0.24
TRPV3-204ENST00000571139 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
TRPV3-204ENST00000571139 RRBP1Q9P2E9 1410 aaKnown RBP16.52■□□□□ 0.24
TRPV3-204ENST00000571139 RAB3GAP2Q9H2M9 1393 aa16.51■□□□□ 0.23
TRPV3-204ENST00000571139 MAPKBP1O60336 1514 aa16.51■□□□□ 0.23
TRPV3-204ENST00000571139 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
TRPV3-204ENST00000571139 WDR97A6NE52 1622 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms