RNA–Protein interactions for RNA: ENST00000570587.5

KCNAB3-202, Transcript of potassium voltage-gated channel subfamily A regulatory beta subunit 3, humanhuman

TSL 1 (best)

Gene KCNAB3, Length 2,406 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3-202ENST00000570587 NISCHQ9Y2I1 1504 aa25.76■■□□□ 1.71
KCNAB3-202ENST00000570587 HRCP23327 699 aa22.83■■□□□ 1.25
KCNAB3-202ENST00000570587 PELP1Q8IZL8 1130 aaKnown RBP22.63■■□□□ 1.21
KCNAB3-202ENST00000570587 PPARGC1BQ86YN6 1023 aaKnown RBP22.14■■□□□ 1.13
KCNAB3-202ENST00000570587 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
KCNAB3-202ENST00000570587 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
KCNAB3-202ENST00000570587 MYT1Q01538 1121 aa21.91■■□□□ 1.1
KCNAB3-202ENST00000570587 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
KCNAB3-202ENST00000570587 MYO15BQ96JP2 1530 aa21.9■■□□□ 1.1
KCNAB3-202ENST00000570587 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.08
KCNAB3-202ENST00000570587 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
KCNAB3-202ENST00000570587 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
KCNAB3-202ENST00000570587 SCAF1Q9H7N4 1312 aaKnown RBP21.69■■□□□ 1.06
KCNAB3-202ENST00000570587 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
KCNAB3-202ENST00000570587 DCAF8L2P0C7V8 631 aa21.46■■□□□ 1.03
KCNAB3-202ENST00000570587 ZEB1P37275 1124 aaPredicted RBP21.46■■□□□ 1.03
KCNAB3-202ENST00000570587 TRIM26Q12899 539 aaPredicted RBP21.44■■□□□ 1.02
KCNAB3-202ENST00000570587 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
KCNAB3-202ENST00000570587 LOC105371045A0A1W2PR82 267 aa21.08■□□□□ 0.96
KCNAB3-202ENST00000570587 ABCC9O60706 1549 aa21.06■□□□□ 0.96
KCNAB3-202ENST00000570587 NEUROD1Q13562 356 aa20.98■□□□□ 0.95
KCNAB3-202ENST00000570587 GTF3C3Q9Y5Q9 886 aa20.89■□□□□ 0.94
KCNAB3-202ENST00000570587 CENPBP07199 599 aaPredicted RBP20.85■□□□□ 0.93
KCNAB3-202ENST00000570587 TTBK1Q5TCY1 1321 aaPredicted RBP20.69■□□□□ 0.9
KCNAB3-202ENST00000570587 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
KCNAB3-202ENST00000570587 DIEXFQ68CQ4 756 aaKnown RBP20.57■□□□□ 0.88
KCNAB3-202ENST00000570587 CCER1Q8TC90 406 aaPredicted RBP20.36■□□□□ 0.85
KCNAB3-202ENST00000570587 RSF1Q96T23 1441 aaPredicted RBP20.35■□□□□ 0.85
KCNAB3-202ENST00000570587 NACADO15069 1562 aa20.34■□□□□ 0.85
KCNAB3-202ENST00000570587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.84
KCNAB3-202ENST00000570587 BCL11AQ9H165 835 aa20.32■□□□□ 0.84
KCNAB3-202ENST00000570587 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
KCNAB3-202ENST00000570587 PRKCSHP14314 528 aaPredicted RBP20.25■□□□□ 0.83
KCNAB3-202ENST00000570587 RB1CC1Q8TDY2 1594 aa20.24■□□□□ 0.83
KCNAB3-202ENST00000570587 FAM9AQ8IZU1 332 aaPredicted RBP20.17■□□□□ 0.82
KCNAB3-202ENST00000570587 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
KCNAB3-202ENST00000570587 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.82
KCNAB3-202ENST00000570587 ANP32EQ9BTT0 268 aa20.11■□□□□ 0.81
KCNAB3-202ENST00000570587 YTHDC1Q96MU7 727 aaKnown RBP20.11■□□□□ 0.81
KCNAB3-202ENST00000570587 CLSPNQ9HAW4 1339 aa20.06■□□□□ 0.8
KCNAB3-202ENST00000570587 MROH2BQ7Z745 1585 aa20.05■□□□□ 0.8
KCNAB3-202ENST00000570587 MIER1Q8N108 512 aa19.97■□□□□ 0.79
KCNAB3-202ENST00000570587 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
KCNAB3-202ENST00000570587 WIZO95785 1651 aa19.91■□□□□ 0.78
KCNAB3-202ENST00000570587 SUPT16HQ9Y5B9 1047 aaKnown RBP19.87■□□□□ 0.77
KCNAB3-202ENST00000570587 TSHZ2Q9NRE2 1034 aa19.86■□□□□ 0.77
KCNAB3-202ENST00000570587 EHMT2Q96KQ7 1210 aa19.85■□□□□ 0.77
KCNAB3-202ENST00000570587 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
KCNAB3-202ENST00000570587 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
KCNAB3-202ENST00000570587 UNC13AQ9UPW8 1703 aa19.79■□□□□ 0.76
KCNAB3-202ENST00000570587 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
KCNAB3-202ENST00000570587 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
KCNAB3-202ENST00000570587 ERICH6Q7L0X2 663 aa19.65■□□□□ 0.74
KCNAB3-202ENST00000570587 SMARCA4P51532 1647 aa19.64■□□□□ 0.74
KCNAB3-202ENST00000570587 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
KCNAB3-202ENST00000570587 APLP2Q06481 763 aa19.57■□□□□ 0.72
KCNAB3-202ENST00000570587 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
KCNAB3-202ENST00000570587 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
KCNAB3-202ENST00000570587 CEP162Q5TB80 1403 aa19.51■□□□□ 0.71
KCNAB3-202ENST00000570587 SMARCA2P51531 1590 aa19.48■□□□□ 0.71
KCNAB3-202ENST00000570587 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
KCNAB3-202ENST00000570587 TNIKQ9UKE5 1360 aa19.41■□□□□ 0.7
KCNAB3-202ENST00000570587 RBM19Q9Y4C8 960 aaKnown RBP19.37■□□□□ 0.69
KCNAB3-202ENST00000570587 HNRNPUL2Q1KMD3 747 aaKnown RBP19.28■□□□□ 0.68
KCNAB3-202ENST00000570587 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
KCNAB3-202ENST00000570587 BCANQ96GW7 911 aa19.23■□□□□ 0.67
KCNAB3-202ENST00000570587 SOGA1O94964 1423 aa19.22■□□□□ 0.67
KCNAB3-202ENST00000570587 FKBP8Q14318 412 aa19.22■□□□□ 0.67
KCNAB3-202ENST00000570587 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
KCNAB3-202ENST00000570587 MSH5O43196 834 aa19.2■□□□□ 0.66
KCNAB3-202ENST00000570587 MYT1LQ9UL68 1186 aa19.2■□□□□ 0.66
KCNAB3-202ENST00000570587 EEA1Q15075 1411 aa19.2■□□□□ 0.66
KCNAB3-202ENST00000570587 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
KCNAB3-202ENST00000570587 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
KCNAB3-202ENST00000570587 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
KCNAB3-202ENST00000570587 DHX57Q6P158 1386 aaKnown RBP19.12■□□□□ 0.65
KCNAB3-202ENST00000570587 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
KCNAB3-202ENST00000570587 NEFLP07196 543 aa19.1■□□□□ 0.65
KCNAB3-202ENST00000570587 UBTFP17480 764 aaKnown RBP19.09■□□□□ 0.65
KCNAB3-202ENST00000570587 KCNH8Q96L42 1107 aa19.06■□□□□ 0.64
KCNAB3-202ENST00000570587 SYNJ1O43426 1573 aa19.02■□□□□ 0.63
KCNAB3-202ENST00000570587 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
KCNAB3-202ENST00000570587 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
KCNAB3-202ENST00000570587 ANO8Q9HCE9 1232 aaPredicted RBP18.98■□□□□ 0.63
KCNAB3-202ENST00000570587 DEKP35659 375 aaKnown RBP18.96■□□□□ 0.63
KCNAB3-202ENST00000570587 ITGAEP38570 1179 aa18.96■□□□□ 0.63
KCNAB3-202ENST00000570587 CLIP1P30622 1438 aa18.96■□□□□ 0.63
KCNAB3-202ENST00000570587 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
KCNAB3-202ENST00000570587 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
KCNAB3-202ENST00000570587 KIF21BO75037 1637 aa18.88■□□□□ 0.61
KCNAB3-202ENST00000570587 ERICH6BQ5W0A0 696 aa18.88■□□□□ 0.61
KCNAB3-202ENST00000570587 CDK11AQ9UQ88 783 aaPredicted RBP18.88■□□□□ 0.61
KCNAB3-202ENST00000570587 NCAPD3P42695 1498 aa18.86■□□□□ 0.61
KCNAB3-202ENST00000570587 CCER2I3L3R5 266 aa18.84■□□□□ 0.61
KCNAB3-202ENST00000570587 CUX2O14529 1486 aa18.84■□□□□ 0.61
KCNAB3-202ENST00000570587 HMGXB3Q12766 1538 aa18.81■□□□□ 0.6
KCNAB3-202ENST00000570587 TOP2BQ02880 1626 aa18.77■□□□□ 0.59
KCNAB3-202ENST00000570587 TRIM52Q96A61 297 aa18.76■□□□□ 0.59
KCNAB3-202ENST00000570587 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
KCNAB3-202ENST00000570587 PPP1R15AO75807 674 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms