RNA–Protein interactions for RNA: ENST00000569516.5

LMF1-214, Transcript of lipase maturation factor 1, humanhuman

TSL 2

Gene LMF1, Length 3,358 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-214ENST00000569516 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
LMF1-214ENST00000569516 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
LMF1-214ENST00000569516 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
LMF1-214ENST00000569516 DCAF8L2P0C7V8 631 aa22.43■■□□□ 1.18
LMF1-214ENST00000569516 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
LMF1-214ENST00000569516 CCDC180Q9P1Z9 1646 aa21.56■■□□□ 1.04
LMF1-214ENST00000569516 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
LMF1-214ENST00000569516 MYO15BQ96JP2 1530 aa21.41■■□□□ 1.02
LMF1-214ENST00000569516 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
LMF1-214ENST00000569516 LOC105371045A0A1W2PR82 267 aa21.27■□□□□ 0.99
LMF1-214ENST00000569516 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
LMF1-214ENST00000569516 PPARGC1BQ86YN6 1023 aaKnown RBP21.06■□□□□ 0.96
LMF1-214ENST00000569516 HRCP23327 699 aa21.02■□□□□ 0.96
LMF1-214ENST00000569516 FAM9AQ8IZU1 332 aaPredicted RBP20.99■□□□□ 0.95
LMF1-214ENST00000569516 TRIM41Q8WV44 630 aa20.71■□□□□ 0.91
LMF1-214ENST00000569516 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
LMF1-214ENST00000569516 ABCC9O60706 1549 aa20.58■□□□□ 0.89
LMF1-214ENST00000569516 DCAF1Q9Y4B6 1507 aa20.57■□□□□ 0.88
LMF1-214ENST00000569516 TRIM26Q12899 539 aaPredicted RBP20.51■□□□□ 0.87
LMF1-214ENST00000569516 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
LMF1-214ENST00000569516 TTBK1Q5TCY1 1321 aaPredicted RBP20.44■□□□□ 0.86
LMF1-214ENST00000569516 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
LMF1-214ENST00000569516 CECR2Q9BXF3 1484 aa20.32■□□□□ 0.84
LMF1-214ENST00000569516 NACADO15069 1562 aa20.15■□□□□ 0.82
LMF1-214ENST00000569516 MROH2BQ7Z745 1585 aa20.12■□□□□ 0.81
LMF1-214ENST00000569516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
LMF1-214ENST00000569516 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
LMF1-214ENST00000569516 WIZO95785 1651 aa20■□□□□ 0.79
LMF1-214ENST00000569516 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
LMF1-214ENST00000569516 ZEB1P37275 1124 aaPredicted RBP19.92■□□□□ 0.78
LMF1-214ENST00000569516 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
LMF1-214ENST00000569516 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
LMF1-214ENST00000569516 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
LMF1-214ENST00000569516 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
LMF1-214ENST00000569516 SOGA1O94964 1423 aa19.68■□□□□ 0.74
LMF1-214ENST00000569516 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
LMF1-214ENST00000569516 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
LMF1-214ENST00000569516 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
LMF1-214ENST00000569516 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
LMF1-214ENST00000569516 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
LMF1-214ENST00000569516 CEP162Q5TB80 1403 aa19.53■□□□□ 0.72
LMF1-214ENST00000569516 UNC13AQ9UPW8 1703 aa19.49■□□□□ 0.71
LMF1-214ENST00000569516 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
LMF1-214ENST00000569516 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
LMF1-214ENST00000569516 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
LMF1-214ENST00000569516 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
LMF1-214ENST00000569516 SMARCA2P51531 1590 aa19.42■□□□□ 0.7
LMF1-214ENST00000569516 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
LMF1-214ENST00000569516 APLP2Q06481 763 aa19.36■□□□□ 0.69
LMF1-214ENST00000569516 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
LMF1-214ENST00000569516 TNIKQ9UKE5 1360 aa19.33■□□□□ 0.68
LMF1-214ENST00000569516 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
LMF1-214ENST00000569516 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
LMF1-214ENST00000569516 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
LMF1-214ENST00000569516 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
LMF1-214ENST00000569516 GOLGA3Q08378 1498 aa19.21■□□□□ 0.67
LMF1-214ENST00000569516 ITGAEP38570 1179 aa19.21■□□□□ 0.67
LMF1-214ENST00000569516 ZNF316A6NFI3 1004 aaPredicted RBP19.18■□□□□ 0.66
LMF1-214ENST00000569516 CLIP1P30622 1438 aa19.18■□□□□ 0.66
LMF1-214ENST00000569516 CENPBP07199 599 aaPredicted RBP19.17■□□□□ 0.66
LMF1-214ENST00000569516 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
LMF1-214ENST00000569516 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
LMF1-214ENST00000569516 MIER1Q8N108 512 aa19.1■□□□□ 0.65
LMF1-214ENST00000569516 EEA1Q15075 1411 aa19.1■□□□□ 0.65
LMF1-214ENST00000569516 RAPGEF2Q9Y4G8 1499 aa19.1■□□□□ 0.65
LMF1-214ENST00000569516 ATAD2BQ9ULI0 1458 aa19.06■□□□□ 0.64
LMF1-214ENST00000569516 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
LMF1-214ENST00000569516 ATP1B4Q9UN42 357 aaPredicted RBP19.03■□□□□ 0.64
LMF1-214ENST00000569516 KANK4Q5T7N3 995 aaPredicted RBP19.01■□□□□ 0.63
LMF1-214ENST00000569516 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
LMF1-214ENST00000569516 P3H3Q8IVL6 736 aa18.94■□□□□ 0.62
LMF1-214ENST00000569516 PELP1Q8IZL8 1130 aaKnown RBP18.88■□□□□ 0.61
LMF1-214ENST00000569516 KIF21BO75037 1637 aa18.83■□□□□ 0.6
LMF1-214ENST00000569516 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
LMF1-214ENST00000569516 PEG3Q9GZU2 1588 aa18.75■□□□□ 0.59
LMF1-214ENST00000569516 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
LMF1-214ENST00000569516 HIRIP3Q9BW71 556 aaPredicted RBP18.71■□□□□ 0.59
LMF1-214ENST00000569516 DHX57Q6P158 1386 aaKnown RBP18.69■□□□□ 0.58
LMF1-214ENST00000569516 KIF27Q86VH2 1401 aa18.68■□□□□ 0.58
LMF1-214ENST00000569516 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
LMF1-214ENST00000569516 CUX1P39880 1505 aa18.65■□□□□ 0.58
LMF1-214ENST00000569516 KCNH8Q96L42 1107 aa18.64■□□□□ 0.57
LMF1-214ENST00000569516 SIN3AQ96ST3 1273 aa18.63■□□□□ 0.57
LMF1-214ENST00000569516 CUX2O14529 1486 aa18.62■□□□□ 0.57
LMF1-214ENST00000569516 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
LMF1-214ENST00000569516 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.57
LMF1-214ENST00000569516 CCNB3Q8WWL7 1395 aa18.58■□□□□ 0.57
LMF1-214ENST00000569516 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
LMF1-214ENST00000569516 ARHGAP35Q9NRY4 1499 aa18.54■□□□□ 0.56
LMF1-214ENST00000569516 BCANQ96GW7 911 aa18.54■□□□□ 0.56
LMF1-214ENST00000569516 DDX10Q13206 875 aaKnown RBP18.54■□□□□ 0.56
LMF1-214ENST00000569516 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
LMF1-214ENST00000569516 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
LMF1-214ENST00000569516 IGF1RP08069 1367 aa18.51■□□□□ 0.55
LMF1-214ENST00000569516 CARMIL1Q5VZK9 1371 aa18.51■□□□□ 0.55
LMF1-214ENST00000569516 RAB3GAP2Q9H2M9 1393 aa18.51■□□□□ 0.55
LMF1-214ENST00000569516 CFTRP13569 1480 aa18.46■□□□□ 0.55
LMF1-214ENST00000569516 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.55
LMF1-214ENST00000569516 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
LMF1-214ENST00000569516 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms