RNA–Protein interactions for RNA: ENST00000566849.5

ZSCAN29-206, Transcript of zinc finger and SCAN domain containing 29, humanhuman

TSL 1 (best)

Gene ZSCAN29, Length 2,834 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSCAN29-206ENST00000566849 NISCHQ9Y2I1 1504 aa22.93■■□□□ 1.26
ZSCAN29-206ENST00000566849 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
ZSCAN29-206ENST00000566849 SUPT5HO00267 1087 aaKnown RBP19.68■□□□□ 0.74
ZSCAN29-206ENST00000566849 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
ZSCAN29-206ENST00000566849 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
ZSCAN29-206ENST00000566849 CCDC180Q9P1Z9 1646 aa19.27■□□□□ 0.67
ZSCAN29-206ENST00000566849 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
ZSCAN29-206ENST00000566849 HRCP23327 699 aa19.24■□□□□ 0.67
ZSCAN29-206ENST00000566849 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
ZSCAN29-206ENST00000566849 DCAF8L2P0C7V8 631 aa19.02■□□□□ 0.64
ZSCAN29-206ENST00000566849 PPARGC1BQ86YN6 1023 aaKnown RBP18.9■□□□□ 0.62
ZSCAN29-206ENST00000566849 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
ZSCAN29-206ENST00000566849 LOC105371045A0A1W2PR82 267 aa18.78■□□□□ 0.6
ZSCAN29-206ENST00000566849 TRIM26Q12899 539 aaPredicted RBP18.52■□□□□ 0.55
ZSCAN29-206ENST00000566849 ABCC9O60706 1549 aa18.44■□□□□ 0.54
ZSCAN29-206ENST00000566849 RSF1Q96T23 1441 aaPredicted RBP18.31■□□□□ 0.52
ZSCAN29-206ENST00000566849 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
ZSCAN29-206ENST00000566849 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
ZSCAN29-206ENST00000566849 RB1CC1Q8TDY2 1594 aa18.22■□□□□ 0.51
ZSCAN29-206ENST00000566849 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
ZSCAN29-206ENST00000566849 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
ZSCAN29-206ENST00000566849 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
ZSCAN29-206ENST00000566849 SCAF1Q9H7N4 1312 aaKnown RBP17.99■□□□□ 0.47
ZSCAN29-206ENST00000566849 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
ZSCAN29-206ENST00000566849 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
ZSCAN29-206ENST00000566849 WIZO95785 1651 aa17.84■□□□□ 0.45
ZSCAN29-206ENST00000566849 PELP1Q8IZL8 1130 aaKnown RBP17.84■□□□□ 0.45
ZSCAN29-206ENST00000566849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
ZSCAN29-206ENST00000566849 NACADO15069 1562 aa17.74■□□□□ 0.43
ZSCAN29-206ENST00000566849 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
ZSCAN29-206ENST00000566849 CCER1Q8TC90 406 aaPredicted RBP17.72■□□□□ 0.43
ZSCAN29-206ENST00000566849 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
ZSCAN29-206ENST00000566849 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
ZSCAN29-206ENST00000566849 NEUROD1Q13562 356 aa17.64■□□□□ 0.41
ZSCAN29-206ENST00000566849 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
ZSCAN29-206ENST00000566849 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
ZSCAN29-206ENST00000566849 CCDC88BA6NC98 1476 aa17.56■□□□□ 0.4
ZSCAN29-206ENST00000566849 DIEXFQ68CQ4 756 aaKnown RBP17.56■□□□□ 0.4
ZSCAN29-206ENST00000566849 WRNQ14191 1432 aaPredicted RBP eCLIP17.54■□□□□ 0.4
ZSCAN29-206ENST00000566849 CEP162Q5TB80 1403 aa17.51■□□□□ 0.39
ZSCAN29-206ENST00000566849 TOP2AP11388 1531 aaKnown RBP17.48■□□□□ 0.39
ZSCAN29-206ENST00000566849 GTF3C3Q9Y5Q9 886 aa17.48■□□□□ 0.39
ZSCAN29-206ENST00000566849 SOGA1O94964 1423 aa17.48■□□□□ 0.39
ZSCAN29-206ENST00000566849 SMARCA2P51531 1590 aa17.44■□□□□ 0.38
ZSCAN29-206ENST00000566849 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
ZSCAN29-206ENST00000566849 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
ZSCAN29-206ENST00000566849 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
ZSCAN29-206ENST00000566849 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
ZSCAN29-206ENST00000566849 CSRNP3Q8WYN3 585 aa17.34■□□□□ 0.37
ZSCAN29-206ENST00000566849 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
ZSCAN29-206ENST00000566849 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
ZSCAN29-206ENST00000566849 EEA1Q15075 1411 aa17.3■□□□□ 0.36
ZSCAN29-206ENST00000566849 GOLGA3Q08378 1498 aa17.26■□□□□ 0.35
ZSCAN29-206ENST00000566849 UNC13AQ9UPW8 1703 aa17.25■□□□□ 0.35
ZSCAN29-206ENST00000566849 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
ZSCAN29-206ENST00000566849 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
ZSCAN29-206ENST00000566849 MIER1Q8N108 512 aa17.18■□□□□ 0.34
ZSCAN29-206ENST00000566849 SYNJ1O43426 1573 aa17.12■□□□□ 0.33
ZSCAN29-206ENST00000566849 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
ZSCAN29-206ENST00000566849 CLIP1P30622 1438 aa17.11■□□□□ 0.33
ZSCAN29-206ENST00000566849 KIF21BO75037 1637 aa17.1■□□□□ 0.33
ZSCAN29-206ENST00000566849 VPS8Q8N3P4 1428 aa17.06■□□□□ 0.32
ZSCAN29-206ENST00000566849 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
ZSCAN29-206ENST00000566849 RAPGEF2Q9Y4G8 1499 aa17.02■□□□□ 0.31
ZSCAN29-206ENST00000566849 RANGAP1P46060 587 aaPredicted RBP17.01■□□□□ 0.31
ZSCAN29-206ENST00000566849 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
ZSCAN29-206ENST00000566849 PEG3Q9GZU2 1588 aa17■□□□□ 0.31
ZSCAN29-206ENST00000566849 MYT1Q01538 1121 aa16.97■□□□□ 0.31
ZSCAN29-206ENST00000566849 BAZ1BQ9UIG0 1483 aaKnown RBP16.97■□□□□ 0.31
ZSCAN29-206ENST00000566849 APLP2Q06481 763 aa16.96■□□□□ 0.31
ZSCAN29-206ENST00000566849 DHX57Q6P158 1386 aaKnown RBP16.88■□□□□ 0.29
ZSCAN29-206ENST00000566849 ATAD2BQ9ULI0 1458 aa16.88■□□□□ 0.29
ZSCAN29-206ENST00000566849 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
ZSCAN29-206ENST00000566849 ARAP1Q96P48 1450 aa16.82■□□□□ 0.28
ZSCAN29-206ENST00000566849 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
ZSCAN29-206ENST00000566849 CLSPNQ9HAW4 1339 aa16.8■□□□□ 0.28
ZSCAN29-206ENST00000566849 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
ZSCAN29-206ENST00000566849 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
ZSCAN29-206ENST00000566849 BIVM-ERCC5R4GMW8 1640 aa16.75■□□□□ 0.27
ZSCAN29-206ENST00000566849 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
ZSCAN29-206ENST00000566849 RRBP1Q9P2E9 1410 aaKnown RBP16.71■□□□□ 0.26
ZSCAN29-206ENST00000566849 CUX2O14529 1486 aa16.65■□□□□ 0.26
ZSCAN29-206ENST00000566849 CUX1P39880 1505 aa16.63■□□□□ 0.25
ZSCAN29-206ENST00000566849 ITGAEP38570 1179 aa16.63■□□□□ 0.25
ZSCAN29-206ENST00000566849 CCNB3Q8WWL7 1395 aa16.63■□□□□ 0.25
ZSCAN29-206ENST00000566849 KCNH8Q96L42 1107 aa16.62■□□□□ 0.25
ZSCAN29-206ENST00000566849 ARHGAP35Q9NRY4 1499 aa16.61■□□□□ 0.25
ZSCAN29-206ENST00000566849 TSHZ2Q9NRE2 1034 aa16.58■□□□□ 0.24
ZSCAN29-206ENST00000566849 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
ZSCAN29-206ENST00000566849 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
ZSCAN29-206ENST00000566849 RAB3GAP2Q9H2M9 1393 aa16.55■□□□□ 0.24
ZSCAN29-206ENST00000566849 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
ZSCAN29-206ENST00000566849 WDR97A6NE52 1622 aa16.46■□□□□ 0.23
ZSCAN29-206ENST00000566849 HMGXB3Q12766 1538 aa16.46■□□□□ 0.22
ZSCAN29-206ENST00000566849 BCANQ96GW7 911 aa16.46■□□□□ 0.22
ZSCAN29-206ENST00000566849 SIN3AQ96ST3 1273 aa16.45■□□□□ 0.22
ZSCAN29-206ENST00000566849 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
ZSCAN29-206ENST00000566849 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
ZSCAN29-206ENST00000566849 SETD5Q9C0A6 1442 aa16.44■□□□□ 0.22
ZSCAN29-206ENST00000566849 CFTRP13569 1480 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 233.8 ms