RNA–Protein interactions for RNA: ENST00000563209.1

NDRG4-219, Transcript of NDRG family member 4, humanhuman

Gene NDRG4, Length 2,700 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG4-219ENST00000563209 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
NDRG4-219ENST00000563209 HRCP23327 699 aa26.25■■□□□ 1.79
NDRG4-219ENST00000563209 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
NDRG4-219ENST00000563209 SUPT5HO00267 1087 aaKnown RBP25.82■■□□□ 1.72
NDRG4-219ENST00000563209 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
NDRG4-219ENST00000563209 PPARGC1BQ86YN6 1023 aaKnown RBP25.67■■□□□ 1.7
NDRG4-219ENST00000563209 MYO15BQ96JP2 1530 aa25.61■■□□□ 1.69
NDRG4-219ENST00000563209 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
NDRG4-219ENST00000563209 PELP1Q8IZL8 1130 aaKnown RBP25.33■■□□□ 1.64
NDRG4-219ENST00000563209 DCAF1Q9Y4B6 1507 aa25.13■■□□□ 1.61
NDRG4-219ENST00000563209 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
NDRG4-219ENST00000563209 TRIM26Q12899 539 aaPredicted RBP24.9■■□□□ 1.58
NDRG4-219ENST00000563209 LOC105371045A0A1W2PR82 267 aa24.87■■□□□ 1.57
NDRG4-219ENST00000563209 CCDC180Q9P1Z9 1646 aa24.84■■□□□ 1.57
NDRG4-219ENST00000563209 SCAF1Q9H7N4 1312 aaKnown RBP24.83■■□□□ 1.56
NDRG4-219ENST00000563209 ZEB1P37275 1124 aaPredicted RBP24.7■■□□□ 1.55
NDRG4-219ENST00000563209 MYT1Q01538 1121 aa24.34■■□□□ 1.49
NDRG4-219ENST00000563209 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.48
NDRG4-219ENST00000563209 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
NDRG4-219ENST00000563209 NEUROD1Q13562 356 aa24.15■■□□□ 1.46
NDRG4-219ENST00000563209 GTF3C3Q9Y5Q9 886 aa24.01■■□□□ 1.43
NDRG4-219ENST00000563209 TRIM41Q8WV44 630 aa23.9■■□□□ 1.42
NDRG4-219ENST00000563209 CENPBP07199 599 aaPredicted RBP23.9■■□□□ 1.42
NDRG4-219ENST00000563209 FAM9AQ8IZU1 332 aaPredicted RBP23.86■■□□□ 1.41
NDRG4-219ENST00000563209 DIEXFQ68CQ4 756 aaKnown RBP23.81■■□□□ 1.4
NDRG4-219ENST00000563209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.8■■□□□ 1.4
NDRG4-219ENST00000563209 ABCC9O60706 1549 aa23.78■■□□□ 1.4
NDRG4-219ENST00000563209 CCER1Q8TC90 406 aaPredicted RBP23.75■■□□□ 1.39
NDRG4-219ENST00000563209 EHMT2Q96KQ7 1210 aa23.72■■□□□ 1.39
NDRG4-219ENST00000563209 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
NDRG4-219ENST00000563209 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
NDRG4-219ENST00000563209 ZNF316A6NFI3 1004 aaPredicted RBP23.37■■□□□ 1.33
NDRG4-219ENST00000563209 YTHDC1Q96MU7 727 aaKnown RBP23.36■■□□□ 1.33
NDRG4-219ENST00000563209 SCRIBQ14160 1630 aa23.23■■□□□ 1.31
NDRG4-219ENST00000563209 MIER1Q8N108 512 aa23.2■■□□□ 1.3
NDRG4-219ENST00000563209 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
NDRG4-219ENST00000563209 WRNQ14191 1432 aaPredicted RBP eCLIP23.15■■□□□ 1.3
NDRG4-219ENST00000563209 CEP162Q5TB80 1403 aa22.97■■□□□ 1.27
NDRG4-219ENST00000563209 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
NDRG4-219ENST00000563209 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
NDRG4-219ENST00000563209 EIF4G1Q04637 1599 aaKnown RBP22.9■■□□□ 1.26
NDRG4-219ENST00000563209 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
NDRG4-219ENST00000563209 WIZO95785 1651 aa22.87■■□□□ 1.25
NDRG4-219ENST00000563209 CLSPNQ9HAW4 1339 aa22.85■■□□□ 1.25
NDRG4-219ENST00000563209 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.25
NDRG4-219ENST00000563209 ANP32EQ9BTT0 268 aa22.83■■□□□ 1.24
NDRG4-219ENST00000563209 TSHZ2Q9NRE2 1034 aa22.78■■□□□ 1.24
NDRG4-219ENST00000563209 HNRNPUL2Q1KMD3 747 aaKnown RBP22.75■■□□□ 1.23
NDRG4-219ENST00000563209 BCL11AQ9H165 835 aa22.75■■□□□ 1.23
NDRG4-219ENST00000563209 CCDC88BA6NC98 1476 aa22.75■■□□□ 1.23
NDRG4-219ENST00000563209 BAZ1AQ9NRL2 1556 aaPredicted RBP22.74■■□□□ 1.23
NDRG4-219ENST00000563209 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
NDRG4-219ENST00000563209 UBTFP17480 764 aaKnown RBP22.67■■□□□ 1.22
NDRG4-219ENST00000563209 SOGA1O94964 1423 aa22.67■■□□□ 1.22
NDRG4-219ENST00000563209 CSRNP3Q8WYN3 585 aa22.62■■□□□ 1.21
NDRG4-219ENST00000563209 EEA1Q15075 1411 aa22.6■■□□□ 1.21
NDRG4-219ENST00000563209 GOLGA3Q08378 1498 aa22.54■■□□□ 1.2
NDRG4-219ENST00000563209 RUSC2Q8N2Y8 1516 aa22.53■■□□□ 1.2
NDRG4-219ENST00000563209 NACADO15069 1562 aa22.53■■□□□ 1.2
NDRG4-219ENST00000563209 TOP2AP11388 1531 aaKnown RBP22.44■■□□□ 1.18
NDRG4-219ENST00000563209 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
NDRG4-219ENST00000563209 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
NDRG4-219ENST00000563209 DHX57Q6P158 1386 aaKnown RBP22.34■■□□□ 1.17
NDRG4-219ENST00000563209 CLIP1P30622 1438 aa22.34■■□□□ 1.17
NDRG4-219ENST00000563209 BCANQ96GW7 911 aa22.33■■□□□ 1.17
NDRG4-219ENST00000563209 APLP2Q06481 763 aa22.32■■□□□ 1.16
NDRG4-219ENST00000563209 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
NDRG4-219ENST00000563209 KCNH8Q96L42 1107 aa22.29■■□□□ 1.16
NDRG4-219ENST00000563209 KIF21BO75037 1637 aa22.27■■□□□ 1.16
NDRG4-219ENST00000563209 FKBP8Q14318 412 aa22.26■■□□□ 1.15
NDRG4-219ENST00000563209 RBM19Q9Y4C8 960 aaKnown RBP22.25■■□□□ 1.15
NDRG4-219ENST00000563209 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
NDRG4-219ENST00000563209 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.13
NDRG4-219ENST00000563209 RANGAP1P46060 587 aaPredicted RBP22.08■■□□□ 1.13
NDRG4-219ENST00000563209 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
NDRG4-219ENST00000563209 MSH5O43196 834 aa22.05■■□□□ 1.12
NDRG4-219ENST00000563209 NEFLP07196 543 aa22.05■■□□□ 1.12
NDRG4-219ENST00000563209 SYNJ1O43426 1573 aa22.03■■□□□ 1.12
NDRG4-219ENST00000563209 ITGAEP38570 1179 aa22.02■■□□□ 1.12
NDRG4-219ENST00000563209 CUX2O14529 1486 aa21.98■■□□□ 1.11
NDRG4-219ENST00000563209 KANK4Q5T7N3 995 aaPredicted RBP21.97■■□□□ 1.11
NDRG4-219ENST00000563209 DDX10Q13206 875 aaKnown RBP21.96■■□□□ 1.11
NDRG4-219ENST00000563209 RRBP1Q9P2E9 1410 aaKnown RBP21.96■■□□□ 1.11
NDRG4-219ENST00000563209 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
NDRG4-219ENST00000563209 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
NDRG4-219ENST00000563209 FANCIQ9NVI1 1328 aa21.87■■□□□ 1.09
NDRG4-219ENST00000563209 PPP1R15AO75807 674 aaPredicted RBP21.86■■□□□ 1.09
NDRG4-219ENST00000563209 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
NDRG4-219ENST00000563209 CCNB3Q8WWL7 1395 aa21.83■■□□□ 1.08
NDRG4-219ENST00000563209 CCER2I3L3R5 266 aa21.82■■□□□ 1.08
NDRG4-219ENST00000563209 ERICH6Q7L0X2 663 aa21.8■■□□□ 1.08
NDRG4-219ENST00000563209 RAB3GAP2Q9H2M9 1393 aa21.78■■□□□ 1.08
NDRG4-219ENST00000563209 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
NDRG4-219ENST00000563209 ANP32CO43423 234 aa21.75■■□□□ 1.07
NDRG4-219ENST00000563209 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
NDRG4-219ENST00000563209 ERICH3Q5RHP9 1530 aa21.74■■□□□ 1.07
NDRG4-219ENST00000563209 PRKCSHP14314 528 aaPredicted RBP21.72■■□□□ 1.07
NDRG4-219ENST00000563209 SIN3AQ96ST3 1273 aa21.71■■□□□ 1.07
NDRG4-219ENST00000563209 HIRIP3Q9BW71 556 aaPredicted RBP21.7■■□□□ 1.06
NDRG4-219ENST00000563209 PRXQ9BXM0 1461 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms