RNA–Protein interactions for RNA: ENST00000562614.1

LINC02140-201, Transcript of long intergenic non-protein coding RNA 2140, humanhuman

TSL 5

Gene LINC02140, Length 427 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02140-201ENST00000562614 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
LINC02140-201ENST00000562614 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
LINC02140-201ENST00000562614 HRCP23327 699 aa14.64□□□□□ -0.07
LINC02140-201ENST00000562614 MYT1Q01538 1121 aa14.45□□□□□ -0.1
LINC02140-201ENST00000562614 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
LINC02140-201ENST00000562614 CCDC180Q9P1Z9 1646 aa14.3□□□□□ -0.12
LINC02140-201ENST00000562614 ZEB1P37275 1124 aaPredicted RBP14.29□□□□□ -0.12
LINC02140-201ENST00000562614 ZCCHC6Q5VYS8 1495 aaKnown RBP14.26□□□□□ -0.13
LINC02140-201ENST00000562614 SUPT5HO00267 1087 aaKnown RBP14.17□□□□□ -0.14
LINC02140-201ENST00000562614 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
LINC02140-201ENST00000562614 SHROOM4Q9ULL8 1493 aa14.11□□□□□ -0.15
LINC02140-201ENST00000562614 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
LINC02140-201ENST00000562614 TRIM26Q12899 539 aaPredicted RBP14.04□□□□□ -0.16
LINC02140-201ENST00000562614 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
LINC02140-201ENST00000562614 AEBP2Q6ZN18 517 aaPredicted RBP13.76□□□□□ -0.21
LINC02140-201ENST00000562614 PPARGC1BQ86YN6 1023 aaKnown RBP13.76□□□□□ -0.21
LINC02140-201ENST00000562614 CENPBP07199 599 aaPredicted RBP13.73□□□□□ -0.21
LINC02140-201ENST00000562614 TTBK1Q5TCY1 1321 aaPredicted RBP13.62□□□□□ -0.23
LINC02140-201ENST00000562614 ABCC9O60706 1549 aa13.6□□□□□ -0.23
LINC02140-201ENST00000562614 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
LINC02140-201ENST00000562614 ACIN1Q9UKV3 1341 aaKnown RBP13.54□□□□□ -0.24
LINC02140-201ENST00000562614 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
LINC02140-201ENST00000562614 LOC105371045A0A1W2PR82 267 aa13.45□□□□□ -0.26
LINC02140-201ENST00000562614 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
LINC02140-201ENST00000562614 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
LINC02140-201ENST00000562614 DCAF8L2P0C7V8 631 aa13.33□□□□□ -0.28
LINC02140-201ENST00000562614 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
LINC02140-201ENST00000562614 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
LINC02140-201ENST00000562614 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.29
LINC02140-201ENST00000562614 GTF3C3Q9Y5Q9 886 aa13.26□□□□□ -0.29
LINC02140-201ENST00000562614 WRNQ14191 1432 aaPredicted RBP eCLIP13.24□□□□□ -0.29
LINC02140-201ENST00000562614 NEUROD1Q13562 356 aa13.23□□□□□ -0.29
LINC02140-201ENST00000562614 EEA1Q15075 1411 aa13.18□□□□□ -0.3
LINC02140-201ENST00000562614 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
LINC02140-201ENST00000562614 SCRIBQ14160 1630 aa13.06□□□□□ -0.32
LINC02140-201ENST00000562614 NACADO15069 1562 aa13.04□□□□□ -0.32
LINC02140-201ENST00000562614 BAZ1AQ9NRL2 1556 aaPredicted RBP13.04□□□□□ -0.32
LINC02140-201ENST00000562614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
LINC02140-201ENST00000562614 TNIKQ9UKE5 1360 aa13□□□□□ -0.33
LINC02140-201ENST00000562614 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
LINC02140-201ENST00000562614 CEP162Q5TB80 1403 aa12.95□□□□□ -0.34
LINC02140-201ENST00000562614 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
LINC02140-201ENST00000562614 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
LINC02140-201ENST00000562614 TOP2AP11388 1531 aaKnown RBP12.86□□□□□ -0.35
LINC02140-201ENST00000562614 ANP32EQ9BTT0 268 aa12.84□□□□□ -0.35
LINC02140-201ENST00000562614 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
LINC02140-201ENST00000562614 MROH2BQ7Z745 1585 aa12.82□□□□□ -0.36
LINC02140-201ENST00000562614 KIF21BO75037 1637 aa12.81□□□□□ -0.36
LINC02140-201ENST00000562614 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
LINC02140-201ENST00000562614 APLP2Q06481 763 aa12.81□□□□□ -0.36
LINC02140-201ENST00000562614 WIZO95785 1651 aa12.8□□□□□ -0.36
LINC02140-201ENST00000562614 CEP164Q9UPV0 1460 aa12.8□□□□□ -0.36
LINC02140-201ENST00000562614 YTHDC1Q96MU7 727 aaKnown RBP12.78□□□□□ -0.36
LINC02140-201ENST00000562614 MIER1Q8N108 512 aa12.75□□□□□ -0.37
LINC02140-201ENST00000562614 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
LINC02140-201ENST00000562614 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
LINC02140-201ENST00000562614 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
LINC02140-201ENST00000562614 NEFLP07196 543 aa12.69□□□□□ -0.38
LINC02140-201ENST00000562614 CECR2Q9BXF3 1484 aa12.69□□□□□ -0.38
LINC02140-201ENST00000562614 UBTFP17480 764 aaKnown RBP12.68□□□□□ -0.38
LINC02140-201ENST00000562614 SMARCA2P51531 1590 aa12.67□□□□□ -0.38
LINC02140-201ENST00000562614 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
LINC02140-201ENST00000562614 CLIP1P30622 1438 aa12.65□□□□□ -0.38
LINC02140-201ENST00000562614 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
LINC02140-201ENST00000562614 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
LINC02140-201ENST00000562614 BCL11AQ9H165 835 aa12.62□□□□□ -0.39
LINC02140-201ENST00000562614 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
LINC02140-201ENST00000562614 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
LINC02140-201ENST00000562614 CUX2O14529 1486 aa12.58□□□□□ -0.4
LINC02140-201ENST00000562614 ERICH3Q5RHP9 1530 aa12.57□□□□□ -0.4
LINC02140-201ENST00000562614 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
LINC02140-201ENST00000562614 SOGA1O94964 1423 aa12.55□□□□□ -0.4
LINC02140-201ENST00000562614 ERICH6Q7L0X2 663 aa12.54□□□□□ -0.4
LINC02140-201ENST00000562614 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.41
LINC02140-201ENST00000562614 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.41
LINC02140-201ENST00000562614 DHX57Q6P158 1386 aaKnown RBP12.52□□□□□ -0.41
LINC02140-201ENST00000562614 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
LINC02140-201ENST00000562614 RRBP1Q9P2E9 1410 aaKnown RBP12.48□□□□□ -0.41
LINC02140-201ENST00000562614 CCER2I3L3R5 266 aa12.48□□□□□ -0.41
LINC02140-201ENST00000562614 FANCIQ9NVI1 1328 aa12.45□□□□□ -0.42
LINC02140-201ENST00000562614 MAP3K1Q13233 1512 aa12.44□□□□□ -0.42
LINC02140-201ENST00000562614 SYNJ1O43426 1573 aa12.41□□□□□ -0.42
LINC02140-201ENST00000562614 CDK11AQ9UQ88 783 aaPredicted RBP12.4□□□□□ -0.42
LINC02140-201ENST00000562614 TOP2BQ02880 1626 aa12.39□□□□□ -0.43
LINC02140-201ENST00000562614 CCNB3Q8WWL7 1395 aa12.38□□□□□ -0.43
LINC02140-201ENST00000562614 BIVM-ERCC5R4GMW8 1640 aa12.37□□□□□ -0.43
LINC02140-201ENST00000562614 ANP32CO43423 234 aa12.37□□□□□ -0.43
LINC02140-201ENST00000562614 FKBP8Q14318 412 aa12.36□□□□□ -0.43
LINC02140-201ENST00000562614 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
LINC02140-201ENST00000562614 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
LINC02140-201ENST00000562614 RAPGEF2Q9Y4G8 1499 aa12.32□□□□□ -0.44
LINC02140-201ENST00000562614 PRXQ9BXM0 1461 aa12.3□□□□□ -0.44
LINC02140-201ENST00000562614 SETD5Q9C0A6 1442 aa12.28□□□□□ -0.44
LINC02140-201ENST00000562614 UNC13AQ9UPW8 1703 aa12.28□□□□□ -0.44
LINC02140-201ENST00000562614 ARAP1Q96P48 1450 aa12.28□□□□□ -0.44
LINC02140-201ENST00000562614 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC02140-201ENST00000562614 FHAD1B1AJZ9 1412 aa12.25□□□□□ -0.45
LINC02140-201ENST00000562614 KIF27Q86VH2 1401 aa12.25□□□□□ -0.45
LINC02140-201ENST00000562614 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
LINC02140-201ENST00000562614 MAPKBP1O60336 1514 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms