RNA–Protein interactions for RNA: ENST00000561223.1

C15orf54-201, Transcript of chromosome 15 open reading frame 54 (putative), humanhuman

TSL 1 (best)

Gene C15orf54, Length 953 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf54-201ENST00000561223 AEBP2Q6ZN18 517 aaPredicted RBP16.43■□□□□ 0.22
C15orf54-201ENST00000561223 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
C15orf54-201ENST00000561223 SENP3Q9H4L4 574 aaPredicted RBP13.75□□□□□ -0.21
C15orf54-201ENST00000561223 PHF23Q9BUL5 403 aaPredicted RBP13.71□□□□□ -0.21
C15orf54-201ENST00000561223 FOXD1Q16676 465 aa12.97□□□□□ -0.33
C15orf54-201ENST00000561223 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
C15orf54-201ENST00000561223 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
C15orf54-201ENST00000561223 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
C15orf54-201ENST00000561223 ADRA2BP18089 450 aa12.16□□□□□ -0.46
C15orf54-201ENST00000561223 PIAS4Q8N2W9 510 aaPredicted RBP12.04□□□□□ -0.48
C15orf54-201ENST00000561223 MSH5O43196 834 aa11.92□□□□□ -0.5
C15orf54-201ENST00000561223 NISCHQ9Y2I1 1504 aa11.91□□□□□ -0.5
C15orf54-201ENST00000561223 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
C15orf54-201ENST00000561223 DMRT2Q9Y5R5 561 aa10.98□□□□□ -0.65
C15orf54-201ENST00000561223 PPP4R3CPQ6ZMV5 832 aa10.85□□□□□ -0.67
C15orf54-201ENST00000561223 SCAF1Q9H7N4 1312 aaKnown RBP10.82□□□□□ -0.68
C15orf54-201ENST00000561223 HOXD11P31277 338 aaPredicted RBP10.6□□□□□ -0.71
C15orf54-201ENST00000561223 CNKSR2Q8WXI2 1034 aa10.57□□□□□ -0.72
C15orf54-201ENST00000561223 ABCC9O60706 1549 aa10.55□□□□□ -0.72
C15orf54-201ENST00000561223 RNF216Q9NWF9 866 aaPredicted RBP10.48□□□□□ -0.73
C15orf54-201ENST00000561223 DCAF8L1A6NGE4 600 aa10.46□□□□□ -0.73
C15orf54-201ENST00000561223 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
C15orf54-201ENST00000561223 DNAJC5BQ9UF47 199 aa10.32□□□□□ -0.76
C15orf54-201ENST00000561223 NCBP3Q53F19 620 aaKnown RBP10.3□□□□□ -0.76
C15orf54-201ENST00000561223 RNF39Q9H2S5 420 aa10.3□□□□□ -0.76
C15orf54-201ENST00000561223 CACNB1Q02641 598 aaPredicted RBP10.24□□□□□ -0.77
C15orf54-201ENST00000561223 KCNA4P22459 653 aa10.23□□□□□ -0.77
C15orf54-201ENST00000561223 CCDC180Q9P1Z9 1646 aa10.22□□□□□ -0.77
C15orf54-201ENST00000561223 ZCCHC6Q5VYS8 1495 aaKnown RBP10.1□□□□□ -0.79
C15orf54-201ENST00000561223 SHROOM4Q9ULL8 1493 aa10.09□□□□□ -0.79
C15orf54-201ENST00000561223 C1QBPQ07021 282 aaKnown RBP10.04□□□□□ -0.8
C15orf54-201ENST00000561223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10□□□□□ -0.81
C15orf54-201ENST00000561223 U3KPZ7 1027 aaPredicted RBP9.95□□□□□ -0.82
C15orf54-201ENST00000561223 SLC4A2P04920 1241 aa9.94□□□□□ -0.82
C15orf54-201ENST00000561223 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
C15orf54-201ENST00000561223 DNAJC5Q9H3Z4 198 aa9.91□□□□□ -0.82
C15orf54-201ENST00000561223 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
C15orf54-201ENST00000561223 DCAF1Q9Y4B6 1507 aa9.83□□□□□ -0.84
C15orf54-201ENST00000561223 SPINK5Q9NQ38 1064 aaPredicted RBP9.83□□□□□ -0.84
C15orf54-201ENST00000561223 MYO15BQ96JP2 1530 aa9.79□□□□□ -0.84
C15orf54-201ENST00000561223 RB1CC1Q8TDY2 1594 aa9.77□□□□□ -0.85
C15orf54-201ENST00000561223 DCAF8L2P0C7V8 631 aa9.77□□□□□ -0.85
C15orf54-201ENST00000561223 HRCP23327 699 aa9.68□□□□□ -0.86
C15orf54-201ENST00000561223 DSG3P32926 999 aa9.68□□□□□ -0.86
C15orf54-201ENST00000561223 CAPN15O75808 1086 aa9.65□□□□□ -0.86
C15orf54-201ENST00000561223 SLC4A1APQ9BWU0 796 aaKnown RBP9.57□□□□□ -0.88
C15orf54-201ENST00000561223 NACADO15069 1562 aa9.55□□□□□ -0.88
C15orf54-201ENST00000561223 CECR2Q9BXF3 1484 aa9.55□□□□□ -0.88
C15orf54-201ENST00000561223 POTEHQ6S545 545 aa9.55□□□□□ -0.88
C15orf54-201ENST00000561223 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
C15orf54-201ENST00000561223 ABCB7O75027 752 aa9.53□□□□□ -0.88
C15orf54-201ENST00000561223 PCGF6Q9BYE7 350 aa9.53□□□□□ -0.88
C15orf54-201ENST00000561223 ZBTB22O15209 634 aa9.51□□□□□ -0.89
C15orf54-201ENST00000561223 SCRIBQ14160 1630 aa9.47□□□□□ -0.89
C15orf54-201ENST00000561223 ATF5Q9Y2D1 282 aaPredicted RBP9.46□□□□□ -0.9
C15orf54-201ENST00000561223 MYCNP04198 464 aaPredicted RBP9.45□□□□□ -0.9
C15orf54-201ENST00000561223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.43□□□□□ -0.9
C15orf54-201ENST00000561223 HNRNPUL2Q1KMD3 747 aaKnown RBP9.43□□□□□ -0.9
C15orf54-201ENST00000561223 SAMD1Q6SPF0 538 aaPredicted RBP9.43□□□□□ -0.9
C15orf54-201ENST00000561223 ZNF219Q9P2Y4 722 aaPredicted RBP9.43□□□□□ -0.9
C15orf54-201ENST00000561223 CC2D2AQ9P2K1 1620 aa9.42□□□□□ -0.9
C15orf54-201ENST00000561223 LOC105371045A0A1W2PR82 267 aa9.41□□□□□ -0.9
C15orf54-201ENST00000561223 TRIM41Q8WV44 630 aa9.41□□□□□ -0.9
C15orf54-201ENST00000561223 FOXD4L1Q9NU39 408 aa9.41□□□□□ -0.9
C15orf54-201ENST00000561223 RSF1Q96T23 1441 aaPredicted RBP9.4□□□□□ -0.9
C15orf54-201ENST00000561223 TRIM26Q12899 539 aaPredicted RBP9.39□□□□□ -0.91
C15orf54-201ENST00000561223 BICRAQ9NZM4 1560 aa9.37□□□□□ -0.91
C15orf54-201ENST00000561223 PPARGC1BQ86YN6 1023 aaKnown RBP9.37□□□□□ -0.91
C15orf54-201ENST00000561223 APLP2Q06481 763 aa9.36□□□□□ -0.91
C15orf54-201ENST00000561223 UNC13AQ9UPW8 1703 aa9.36□□□□□ -0.91
C15orf54-201ENST00000561223 EHMT2Q96KQ7 1210 aa9.35□□□□□ -0.91
C15orf54-201ENST00000561223 ZEB1P37275 1124 aaPredicted RBP9.3□□□□□ -0.92
C15orf54-201ENST00000561223 POLA2Q14181 598 aa9.3□□□□□ -0.92
C15orf54-201ENST00000561223 EIF4G1Q04637 1599 aaKnown RBP9.26□□□□□ -0.93
C15orf54-201ENST00000561223 CUX2O14529 1486 aa9.25□□□□□ -0.93
C15orf54-201ENST00000561223 WIZO95785 1651 aa9.25□□□□□ -0.93
C15orf54-201ENST00000561223 CSRNP3Q8WYN3 585 aa9.24□□□□□ -0.93
C15orf54-201ENST00000561223 MROH2BQ7Z745 1585 aa9.24□□□□□ -0.93
C15orf54-201ENST00000561223 BAZ1AQ9NRL2 1556 aaPredicted RBP9.24□□□□□ -0.93
C15orf54-201ENST00000561223 ERCC6Q03468 1493 aa9.22□□□□□ -0.93
C15orf54-201ENST00000561223 FAM9AQ8IZU1 332 aaPredicted RBP9.16□□□□□ -0.94
C15orf54-201ENST00000561223 ATXN8OSP0DMR3 200 aa9.15□□□□□ -0.94
C15orf54-201ENST00000561223 TOP2AP11388 1531 aaKnown RBP9.12□□□□□ -0.95
C15orf54-201ENST00000561223 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
C15orf54-201ENST00000561223 OSCARQ8IYS5 282 aa9.07□□□□□ -0.96
C15orf54-201ENST00000561223 SMARCA2P51531 1590 aa9.06□□□□□ -0.96
C15orf54-201ENST00000561223 PELP1Q8IZL8 1130 aaKnown RBP9.04□□□□□ -0.96
C15orf54-201ENST00000561223 RBM42Q9BTD8 480 aaKnown RBP9.04□□□□□ -0.96
C15orf54-201ENST00000561223 ABCC8Q09428 1581 aa9.03□□□□□ -0.96
C15orf54-201ENST00000561223 WRNQ14191 1432 aaPredicted RBP eCLIP9.02□□□□□ -0.97
C15orf54-201ENST00000561223 CCDC88BA6NC98 1476 aa9.01□□□□□ -0.97
C15orf54-201ENST00000561223 MKRN4PQ13434 485 aaPredicted RBP9□□□□□ -0.97
C15orf54-201ENST00000561223 EEA1Q15075 1411 aa8.99□□□□□ -0.97
C15orf54-201ENST00000561223 TNIKQ9UKE5 1360 aa8.96□□□□□ -0.98
C15orf54-201ENST00000561223 CEP162Q5TB80 1403 aa8.96□□□□□ -0.98
C15orf54-201ENST00000561223 CHRDL2Q6WN34 429 aa8.95□□□□□ -0.98
C15orf54-201ENST00000561223 CCER1Q8TC90 406 aaPredicted RBP8.95□□□□□ -0.98
C15orf54-201ENST00000561223 ZBTB12Q9Y330 459 aaPredicted RBP8.94□□□□□ -0.98
C15orf54-201ENST00000561223 PEG3Q9GZU2 1588 aa8.92□□□□□ -0.98
C15orf54-201ENST00000561223 GOLGA3Q08378 1498 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms