RNA–Protein interactions for RNA: ENST00000558362.5

GATM-207, Transcript of glycine amidinotransferase, humanhuman

TSL 1 (best)

Gene GATM, Length 3,911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATM-207ENST00000558362 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
GATM-207ENST00000558362 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
GATM-207ENST00000558362 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
GATM-207ENST00000558362 SUPT5HO00267 1087 aaKnown RBP24.54■■□□□ 1.52
GATM-207ENST00000558362 EHMT2Q96KQ7 1210 aa23.45■■□□□ 1.35
GATM-207ENST00000558362 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
GATM-207ENST00000558362 ABCC9O60706 1549 aa22.89■■□□□ 1.26
GATM-207ENST00000558362 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
GATM-207ENST00000558362 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
GATM-207ENST00000558362 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
GATM-207ENST00000558362 ZCCHC6Q5VYS8 1495 aaKnown RBP22.49■■□□□ 1.19
GATM-207ENST00000558362 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
GATM-207ENST00000558362 TTBK1Q5TCY1 1321 aaPredicted RBP22.48■■□□□ 1.19
GATM-207ENST00000558362 PCGF6Q9BYE7 350 aa22.47■■□□□ 1.19
GATM-207ENST00000558362 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
GATM-207ENST00000558362 PPARGC1BQ86YN6 1023 aaKnown RBP22.27■■□□□ 1.16
GATM-207ENST00000558362 CCDC180Q9P1Z9 1646 aa22.21■■□□□ 1.15
GATM-207ENST00000558362 SCRIBQ14160 1630 aa22.11■■□□□ 1.13
GATM-207ENST00000558362 UBTFP17480 764 aaKnown RBP21.92■■□□□ 1.1
GATM-207ENST00000558362 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
GATM-207ENST00000558362 APLP2Q06481 763 aa21.63■■□□□ 1.05
GATM-207ENST00000558362 RSF1Q96T23 1441 aaPredicted RBP21.58■■□□□ 1.04
GATM-207ENST00000558362 ATP1B4Q9UN42 357 aaPredicted RBP21.56■■□□□ 1.04
GATM-207ENST00000558362 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
GATM-207ENST00000558362 TRIM26Q12899 539 aaPredicted RBP21.48■■□□□ 1.03
GATM-207ENST00000558362 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
GATM-207ENST00000558362 HRCP23327 699 aa21.38■■□□□ 1.01
GATM-207ENST00000558362 DCAF1Q9Y4B6 1507 aa21.35■■□□□ 1.01
GATM-207ENST00000558362 RB1CC1Q8TDY2 1594 aa21.27■■□□□ 1
GATM-207ENST00000558362 NACADO15069 1562 aa21.27■□□□□ 0.99
GATM-207ENST00000558362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.25■□□□□ 0.99
GATM-207ENST00000558362 HNRNPUL2Q1KMD3 747 aaKnown RBP21.25■□□□□ 0.99
GATM-207ENST00000558362 ITGAEP38570 1179 aa21.23■□□□□ 0.99
GATM-207ENST00000558362 MROH2BQ7Z745 1585 aa21.17■□□□□ 0.98
GATM-207ENST00000558362 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
GATM-207ENST00000558362 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
GATM-207ENST00000558362 ZEB1P37275 1124 aaPredicted RBP20.93■□□□□ 0.94
GATM-207ENST00000558362 WIZO95785 1651 aa20.9■□□□□ 0.94
GATM-207ENST00000558362 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
GATM-207ENST00000558362 ARID3CA6NKF2 412 aa20.81■□□□□ 0.92
GATM-207ENST00000558362 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
GATM-207ENST00000558362 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
GATM-207ENST00000558362 YTHDC1Q96MU7 727 aaKnown RBP20.76■□□□□ 0.91
GATM-207ENST00000558362 SOGA1O94964 1423 aa20.76■□□□□ 0.91
GATM-207ENST00000558362 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
GATM-207ENST00000558362 FBLN2P98095 1184 aa20.69■□□□□ 0.9
GATM-207ENST00000558362 WRNQ14191 1432 aaPredicted RBP eCLIP20.67■□□□□ 0.9
GATM-207ENST00000558362 FAM50AQ14320 339 aaKnown RBP20.67■□□□□ 0.9
GATM-207ENST00000558362 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
GATM-207ENST00000558362 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
GATM-207ENST00000558362 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
GATM-207ENST00000558362 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
GATM-207ENST00000558362 CLIP1P30622 1438 aa20.44■□□□□ 0.86
GATM-207ENST00000558362 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
GATM-207ENST00000558362 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
GATM-207ENST00000558362 CNGB1Q14028 1251 aaPredicted RBP20.39■□□□□ 0.86
GATM-207ENST00000558362 DIEXFQ68CQ4 756 aaKnown RBP20.39■□□□□ 0.86
GATM-207ENST00000558362 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
GATM-207ENST00000558362 TNIKQ9UKE5 1360 aa20.31■□□□□ 0.84
GATM-207ENST00000558362 CENPBP07199 599 aaPredicted RBP20.25■□□□□ 0.83
GATM-207ENST00000558362 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
GATM-207ENST00000558362 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
GATM-207ENST00000558362 POLR3GLQ9BT43 218 aa20.22■□□□□ 0.83
GATM-207ENST00000558362 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
GATM-207ENST00000558362 EEA1Q15075 1411 aa20.2■□□□□ 0.82
GATM-207ENST00000558362 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
GATM-207ENST00000558362 MYT1LQ9UL68 1186 aa20.18■□□□□ 0.82
GATM-207ENST00000558362 KANK4Q5T7N3 995 aaPredicted RBP20.18■□□□□ 0.82
GATM-207ENST00000558362 CHIC2Q9UKJ5 165 aa20.18■□□□□ 0.82
GATM-207ENST00000558362 CUX2O14529 1486 aa20.17■□□□□ 0.82
GATM-207ENST00000558362 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
GATM-207ENST00000558362 ZNF777Q9ULD5 760 aaPredicted RBP20.16■□□□□ 0.82
GATM-207ENST00000558362 TDRD9Q8NDG6 1382 aaKnown RBP20.12■□□□□ 0.81
GATM-207ENST00000558362 RAPGEF2Q9Y4G8 1499 aa20.11■□□□□ 0.81
GATM-207ENST00000558362 BICRAQ9NZM4 1560 aa20.11■□□□□ 0.81
GATM-207ENST00000558362 ZNF316A6NFI3 1004 aaPredicted RBP20.09■□□□□ 0.81
GATM-207ENST00000558362 HIRIP3Q9BW71 556 aaPredicted RBP20.07■□□□□ 0.8
GATM-207ENST00000558362 CARMIL1Q5VZK9 1371 aa20.06■□□□□ 0.8
GATM-207ENST00000558362 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
GATM-207ENST00000558362 ZNF326Q5BKZ1 582 aaKnown RBP20.03■□□□□ 0.8
GATM-207ENST00000558362 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
GATM-207ENST00000558362 EIF4G1Q04637 1599 aaKnown RBP19.99■□□□□ 0.79
GATM-207ENST00000558362 RRP7BPQ9NSQ0 103 aa19.95■□□□□ 0.78
GATM-207ENST00000558362 MTUS2Q5JR59 1369 aa19.94■□□□□ 0.78
GATM-207ENST00000558362 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.77
GATM-207ENST00000558362 VPS8Q8N3P4 1428 aa19.89■□□□□ 0.77
GATM-207ENST00000558362 SYNJ1O43426 1573 aa19.88■□□□□ 0.77
GATM-207ENST00000558362 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
GATM-207ENST00000558362 NESP48681 1621 aa19.88■□□□□ 0.77
GATM-207ENST00000558362 SIN3AQ96ST3 1273 aa19.87■□□□□ 0.77
GATM-207ENST00000558362 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
GATM-207ENST00000558362 GTF3C3Q9Y5Q9 886 aa19.83■□□□□ 0.77
GATM-207ENST00000558362 MIER1Q8N108 512 aa19.82■□□□□ 0.76
GATM-207ENST00000558362 FANCD2Q9BXW9 1451 aa19.82■□□□□ 0.76
GATM-207ENST00000558362 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
GATM-207ENST00000558362 DDX10Q13206 875 aaKnown RBP19.8■□□□□ 0.76
GATM-207ENST00000558362 IGF1RP08069 1367 aa19.77■□□□□ 0.76
GATM-207ENST00000558362 FHOD3Q2V2M9 1422 aa19.76■□□□□ 0.75
GATM-207ENST00000558362 KCNH8Q96L42 1107 aa19.75■□□□□ 0.75
GATM-207ENST00000558362 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms