RNA–Protein interactions for RNA: ENST00000555387.1

NRXN3-210, Transcript of neurexin 3, humanhuman

TSL 2

Gene NRXN3, Length 3,211 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-210ENST00000555387 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
NRXN3-210ENST00000555387 HRCP23327 699 aa15.49■□□□□ 0.07
NRXN3-210ENST00000555387 SHROOM4Q9ULL8 1493 aa15.18■□□□□ 0.02
NRXN3-210ENST00000555387 PPARGC1BQ86YN6 1023 aaKnown RBP15.15■□□□□ 0.02
NRXN3-210ENST00000555387 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
NRXN3-210ENST00000555387 PCGF6Q9BYE7 350 aa15.12■□□□□ 0.01
NRXN3-210ENST00000555387 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
NRXN3-210ENST00000555387 PELP1Q8IZL8 1130 aaKnown RBP14.98□□□□□ -0.01
NRXN3-210ENST00000555387 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.01
NRXN3-210ENST00000555387 DCAF1Q9Y4B6 1507 aa14.79□□□□□ -0.04
NRXN3-210ENST00000555387 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
NRXN3-210ENST00000555387 TRIM26Q12899 539 aaPredicted RBP14.64□□□□□ -0.07
NRXN3-210ENST00000555387 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
NRXN3-210ENST00000555387 ZCCHC6Q5VYS8 1495 aaKnown RBP14.62□□□□□ -0.07
NRXN3-210ENST00000555387 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
NRXN3-210ENST00000555387 ZEB1P37275 1124 aaPredicted RBP14.53□□□□□ -0.08
NRXN3-210ENST00000555387 MYT1Q01538 1121 aa14.4□□□□□ -0.1
NRXN3-210ENST00000555387 ACIN1Q9UKV3 1341 aaKnown RBP14.3□□□□□ -0.12
NRXN3-210ENST00000555387 NEUROD1Q13562 356 aa14.26□□□□□ -0.13
NRXN3-210ENST00000555387 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
NRXN3-210ENST00000555387 GTF3C3Q9Y5Q9 886 aa14.17□□□□□ -0.14
NRXN3-210ENST00000555387 CENPBP07199 599 aaPredicted RBP14.07□□□□□ -0.16
NRXN3-210ENST00000555387 DIEXFQ68CQ4 756 aaKnown RBP14.02□□□□□ -0.17
NRXN3-210ENST00000555387 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
NRXN3-210ENST00000555387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
NRXN3-210ENST00000555387 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
NRXN3-210ENST00000555387 CCER1Q8TC90 406 aaPredicted RBP13.96□□□□□ -0.17
NRXN3-210ENST00000555387 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
NRXN3-210ENST00000555387 ABCC9O60706 1549 aa13.9□□□□□ -0.18
NRXN3-210ENST00000555387 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.19
NRXN3-210ENST00000555387 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
NRXN3-210ENST00000555387 YTHDC1Q96MU7 727 aaKnown RBP13.76□□□□□ -0.21
NRXN3-210ENST00000555387 ZNF316A6NFI3 1004 aaPredicted RBP13.75□□□□□ -0.21
NRXN3-210ENST00000555387 MIER1Q8N108 512 aa13.67□□□□□ -0.22
NRXN3-210ENST00000555387 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
NRXN3-210ENST00000555387 WRNQ14191 1432 aaPredicted RBP eCLIP13.59□□□□□ -0.23
NRXN3-210ENST00000555387 SCRIBQ14160 1630 aa13.57□□□□□ -0.24
NRXN3-210ENST00000555387 ANP32EQ9BTT0 268 aa13.5□□□□□ -0.25
NRXN3-210ENST00000555387 SUPT16HQ9Y5B9 1047 aaKnown RBP13.49□□□□□ -0.25
NRXN3-210ENST00000555387 BCL11AQ9H165 835 aa13.49□□□□□ -0.25
NRXN3-210ENST00000555387 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
NRXN3-210ENST00000555387 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
NRXN3-210ENST00000555387 CLSPNQ9HAW4 1339 aa13.45□□□□□ -0.26
NRXN3-210ENST00000555387 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
NRXN3-210ENST00000555387 EIF4G1Q04637 1599 aaKnown RBP13.42□□□□□ -0.26
NRXN3-210ENST00000555387 MROH2BQ7Z745 1585 aa13.42□□□□□ -0.26
NRXN3-210ENST00000555387 WIZO95785 1651 aa13.39□□□□□ -0.27
NRXN3-210ENST00000555387 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
NRXN3-210ENST00000555387 HNRNPUL2Q1KMD3 747 aaKnown RBP13.35□□□□□ -0.27
NRXN3-210ENST00000555387 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
NRXN3-210ENST00000555387 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
NRXN3-210ENST00000555387 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
NRXN3-210ENST00000555387 SOGA1O94964 1423 aa13.3□□□□□ -0.28
NRXN3-210ENST00000555387 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
NRXN3-210ENST00000555387 UBTFP17480 764 aaKnown RBP13.27□□□□□ -0.29
NRXN3-210ENST00000555387 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
NRXN3-210ENST00000555387 EEA1Q15075 1411 aa13.21□□□□□ -0.29
NRXN3-210ENST00000555387 GOLGA3Q08378 1498 aa13.19□□□□□ -0.3
NRXN3-210ENST00000555387 NACADO15069 1562 aa13.18□□□□□ -0.3
NRXN3-210ENST00000555387 BCANQ96GW7 911 aa13.16□□□□□ -0.3
NRXN3-210ENST00000555387 DHX57Q6P158 1386 aaKnown RBP13.14□□□□□ -0.31
NRXN3-210ENST00000555387 KCNH8Q96L42 1107 aa13.13□□□□□ -0.31
NRXN3-210ENST00000555387 RBM19Q9Y4C8 960 aaKnown RBP13.13□□□□□ -0.31
NRXN3-210ENST00000555387 FKBP8Q14318 412 aa13.11□□□□□ -0.31
NRXN3-210ENST00000555387 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
NRXN3-210ENST00000555387 CLIP1P30622 1438 aa13.11□□□□□ -0.31
NRXN3-210ENST00000555387 VPS8Q8N3P4 1428 aa13.1□□□□□ -0.31
NRXN3-210ENST00000555387 SMARCA2P51531 1590 aa13.09□□□□□ -0.31
NRXN3-210ENST00000555387 APLP2Q06481 763 aa13.06□□□□□ -0.32
NRXN3-210ENST00000555387 CEP164Q9UPV0 1460 aa13.05□□□□□ -0.32
NRXN3-210ENST00000555387 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
NRXN3-210ENST00000555387 KIF21BO75037 1637 aa13.04□□□□□ -0.32
NRXN3-210ENST00000555387 MSH5O43196 834 aa13.03□□□□□ -0.32
NRXN3-210ENST00000555387 ITGAEP38570 1179 aa12.98□□□□□ -0.33
NRXN3-210ENST00000555387 NEFLP07196 543 aa12.96□□□□□ -0.34
NRXN3-210ENST00000555387 BAZ1BQ9UIG0 1483 aaKnown RBP12.95□□□□□ -0.34
NRXN3-210ENST00000555387 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
NRXN3-210ENST00000555387 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
NRXN3-210ENST00000555387 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
NRXN3-210ENST00000555387 RANGAP1P46060 587 aaPredicted RBP12.93□□□□□ -0.34
NRXN3-210ENST00000555387 FANCIQ9NVI1 1328 aa12.91□□□□□ -0.34
NRXN3-210ENST00000555387 CUX2O14529 1486 aa12.91□□□□□ -0.34
NRXN3-210ENST00000555387 DDX10Q13206 875 aaKnown RBP12.9□□□□□ -0.34
NRXN3-210ENST00000555387 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
NRXN3-210ENST00000555387 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
NRXN3-210ENST00000555387 RRBP1Q9P2E9 1410 aaKnown RBP12.89□□□□□ -0.35
NRXN3-210ENST00000555387 TRIM52Q96A61 297 aa12.88□□□□□ -0.35
NRXN3-210ENST00000555387 PPP1R15AO75807 674 aaPredicted RBP12.86□□□□□ -0.35
NRXN3-210ENST00000555387 MAPKBP1O60336 1514 aa12.84□□□□□ -0.35
NRXN3-210ENST00000555387 ERICH6Q7L0X2 663 aa12.84□□□□□ -0.35
NRXN3-210ENST00000555387 CCER2I3L3R5 266 aa12.83□□□□□ -0.36
NRXN3-210ENST00000555387 ARAP1Q96P48 1450 aa12.83□□□□□ -0.36
NRXN3-210ENST00000555387 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
NRXN3-210ENST00000555387 CCNB3Q8WWL7 1395 aa12.8□□□□□ -0.36
NRXN3-210ENST00000555387 CDK11AQ9UQ88 783 aaPredicted RBP12.8□□□□□ -0.36
NRXN3-210ENST00000555387 RAB3GAP2Q9H2M9 1393 aa12.79□□□□□ -0.36
NRXN3-210ENST00000555387 DEKP35659 375 aaKnown RBP12.79□□□□□ -0.36
NRXN3-210ENST00000555387 MYT1LQ9UL68 1186 aa12.79□□□□□ -0.36
NRXN3-210ENST00000555387 ANP32CO43423 234 aa12.77□□□□□ -0.37
NRXN3-210ENST00000555387 SIN3AQ96ST3 1273 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms