RNA–Protein interactions for RNA: ENST00000554347.1

CASC1-206, Transcript of cancer susceptibility 1, humanhuman

TSL 4

Gene CASC1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-206ENST00000554347 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
CASC1-206ENST00000554347 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
CASC1-206ENST00000554347 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
CASC1-206ENST00000554347 SENP3Q9H4L4 574 aaPredicted RBP16.92■□□□□ 0.3
CASC1-206ENST00000554347 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
CASC1-206ENST00000554347 NISCHQ9Y2I1 1504 aa15.69■□□□□ 0.1
CASC1-206ENST00000554347 FOXD1Q16676 465 aa15.5■□□□□ 0.07
CASC1-206ENST00000554347 ADRA2BP18089 450 aa15.26■□□□□ 0.03
CASC1-206ENST00000554347 PPP6R1Q9UPN7 881 aa15.22■□□□□ 0.03
CASC1-206ENST00000554347 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
CASC1-206ENST00000554347 KCNA4P22459 653 aa14.62□□□□□ -0.07
CASC1-206ENST00000554347 PPP4R3CPQ6ZMV5 832 aa14.48□□□□□ -0.09
CASC1-206ENST00000554347 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
CASC1-206ENST00000554347 MSH5O43196 834 aa14.27□□□□□ -0.13
CASC1-206ENST00000554347 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
CASC1-206ENST00000554347 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
CASC1-206ENST00000554347 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
CASC1-206ENST00000554347 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
CASC1-206ENST00000554347 NPM3O75607 178 aaKnown RBP14.01□□□□□ -0.17
CASC1-206ENST00000554347 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.17
CASC1-206ENST00000554347 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
CASC1-206ENST00000554347 DNAJC5BQ9UF47 199 aa13.67□□□□□ -0.22
CASC1-206ENST00000554347 MAPK8IP2Q13387 824 aaPredicted RBP13.66□□□□□ -0.22
CASC1-206ENST00000554347 ABCC9O60706 1549 aa13.65□□□□□ -0.22
CASC1-206ENST00000554347 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
CASC1-206ENST00000554347 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
CASC1-206ENST00000554347 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
CASC1-206ENST00000554347 ZBTB22O15209 634 aa13.42□□□□□ -0.26
CASC1-206ENST00000554347 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
CASC1-206ENST00000554347 DCAF8L2P0C7V8 631 aa13.29□□□□□ -0.28
CASC1-206ENST00000554347 RB1CC1Q8TDY2 1594 aa13.16□□□□□ -0.3
CASC1-206ENST00000554347 NACADO15069 1562 aa13.11□□□□□ -0.31
CASC1-206ENST00000554347 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
CASC1-206ENST00000554347 ZCCHC6Q5VYS8 1495 aaKnown RBP13.06□□□□□ -0.32
CASC1-206ENST00000554347 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
CASC1-206ENST00000554347 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
CASC1-206ENST00000554347 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
CASC1-206ENST00000554347 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
CASC1-206ENST00000554347 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
CASC1-206ENST00000554347 UNC13AQ9UPW8 1703 aa12.82□□□□□ -0.36
CASC1-206ENST00000554347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
CASC1-206ENST00000554347 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
CASC1-206ENST00000554347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.79□□□□□ -0.36
CASC1-206ENST00000554347 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
CASC1-206ENST00000554347 PABPN1Q86U42 306 aaKnown RBP eCLIP12.77□□□□□ -0.37
CASC1-206ENST00000554347 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
CASC1-206ENST00000554347 BICRAQ9NZM4 1560 aa12.64□□□□□ -0.39
CASC1-206ENST00000554347 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
CASC1-206ENST00000554347 APLP2Q06481 763 aa12.59□□□□□ -0.39
CASC1-206ENST00000554347 SHROOM4Q9ULL8 1493 aa12.56□□□□□ -0.4
CASC1-206ENST00000554347 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
CASC1-206ENST00000554347 FKBP8Q14318 412 aa12.45□□□□□ -0.42
CASC1-206ENST00000554347 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
CASC1-206ENST00000554347 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
CASC1-206ENST00000554347 CC2D2AQ9P2K1 1620 aa12.33□□□□□ -0.44
CASC1-206ENST00000554347 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
CASC1-206ENST00000554347 CECR2Q9BXF3 1484 aa12.25□□□□□ -0.45
CASC1-206ENST00000554347 BAZ1AQ9NRL2 1556 aaPredicted RBP12.21□□□□□ -0.46
CASC1-206ENST00000554347 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
CASC1-206ENST00000554347 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
CASC1-206ENST00000554347 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
CASC1-206ENST00000554347 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
CASC1-206ENST00000554347 FBLN2P98095 1184 aa12.12□□□□□ -0.47
CASC1-206ENST00000554347 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
CASC1-206ENST00000554347 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
CASC1-206ENST00000554347 MROH2BQ7Z745 1585 aa12.09□□□□□ -0.47
CASC1-206ENST00000554347 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.47
CASC1-206ENST00000554347 CAPN15O75808 1086 aa12.07□□□□□ -0.48
CASC1-206ENST00000554347 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
CASC1-206ENST00000554347 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
CASC1-206ENST00000554347 NCAPD3P42695 1498 aa12.05□□□□□ -0.48
CASC1-206ENST00000554347 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
CASC1-206ENST00000554347 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
CASC1-206ENST00000554347 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
CASC1-206ENST00000554347 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
CASC1-206ENST00000554347 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
CASC1-206ENST00000554347 POLA2Q14181 598 aa12.01□□□□□ -0.49
CASC1-206ENST00000554347 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
CASC1-206ENST00000554347 WIZO95785 1651 aa12□□□□□ -0.49
CASC1-206ENST00000554347 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
CASC1-206ENST00000554347 RSF1Q96T23 1441 aaPredicted RBP11.95□□□□□ -0.5
CASC1-206ENST00000554347 PROM2Q8N271 834 aa11.91□□□□□ -0.5
CASC1-206ENST00000554347 TOP2AP11388 1531 aaKnown RBP11.87□□□□□ -0.51
CASC1-206ENST00000554347 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
CASC1-206ENST00000554347 ERCC6Q03468 1493 aa11.84□□□□□ -0.51
CASC1-206ENST00000554347 ABCB7O75027 752 aa11.82□□□□□ -0.52
CASC1-206ENST00000554347 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
CASC1-206ENST00000554347 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
CASC1-206ENST00000554347 NESP48681 1621 aa11.78□□□□□ -0.52
CASC1-206ENST00000554347 VASPP50552 380 aaPredicted RBP11.75□□□□□ -0.53
CASC1-206ENST00000554347 DSG3P32926 999 aa11.74□□□□□ -0.53
CASC1-206ENST00000554347 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
CASC1-206ENST00000554347 PDS5BQ9NTI5 1447 aa11.74□□□□□ -0.53
CASC1-206ENST00000554347 CCDC88BA6NC98 1476 aa11.71□□□□□ -0.53
CASC1-206ENST00000554347 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
CASC1-206ENST00000554347 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
CASC1-206ENST00000554347 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
CASC1-206ENST00000554347 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
CASC1-206ENST00000554347 CFTRP13569 1480 aa11.66□□□□□ -0.54
CASC1-206ENST00000554347 PRDM2Q13029 1718 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms