RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
NRDE2-202ENST00000553409 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
NRDE2-202ENST00000553409 HRCP23327 699 aa19.21■□□□□ 0.66
NRDE2-202ENST00000553409 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
NRDE2-202ENST00000553409 PCGF6Q9BYE7 350 aa18.88■□□□□ 0.61
NRDE2-202ENST00000553409 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
NRDE2-202ENST00000553409 PPARGC1BQ86YN6 1023 aaKnown RBP18.84■□□□□ 0.61
NRDE2-202ENST00000553409 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
NRDE2-202ENST00000553409 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
NRDE2-202ENST00000553409 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
NRDE2-202ENST00000553409 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
NRDE2-202ENST00000553409 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
NRDE2-202ENST00000553409 TRIM26Q12899 539 aaPredicted RBP18.28■□□□□ 0.52
NRDE2-202ENST00000553409 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
NRDE2-202ENST00000553409 CCDC180Q9P1Z9 1646 aa18.14■□□□□ 0.5
NRDE2-202ENST00000553409 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
NRDE2-202ENST00000553409 ZEB1P37275 1124 aaPredicted RBP18.07■□□□□ 0.48
NRDE2-202ENST00000553409 ACIN1Q9UKV3 1341 aaKnown RBP17.7■□□□□ 0.42
NRDE2-202ENST00000553409 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
NRDE2-202ENST00000553409 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
NRDE2-202ENST00000553409 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
NRDE2-202ENST00000553409 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
NRDE2-202ENST00000553409 GTF3C3Q9Y5Q9 886 aa17.55■□□□□ 0.4
NRDE2-202ENST00000553409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
NRDE2-202ENST00000553409 ABCC9O60706 1549 aa17.54■□□□□ 0.4
NRDE2-202ENST00000553409 MYT1Q01538 1121 aa17.53■□□□□ 0.4
NRDE2-202ENST00000553409 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
NRDE2-202ENST00000553409 CCER1Q8TC90 406 aaPredicted RBP17.48■□□□□ 0.39
NRDE2-202ENST00000553409 CENPBP07199 599 aaPredicted RBP17.46■□□□□ 0.38
NRDE2-202ENST00000553409 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
NRDE2-202ENST00000553409 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.38
NRDE2-202ENST00000553409 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
NRDE2-202ENST00000553409 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
NRDE2-202ENST00000553409 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
NRDE2-202ENST00000553409 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.33
NRDE2-202ENST00000553409 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
NRDE2-202ENST00000553409 MIER1Q8N108 512 aa17.03■□□□□ 0.32
NRDE2-202ENST00000553409 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
NRDE2-202ENST00000553409 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
NRDE2-202ENST00000553409 CEP162Q5TB80 1403 aa16.95■□□□□ 0.3
NRDE2-202ENST00000553409 WIZO95785 1651 aa16.93■□□□□ 0.3
NRDE2-202ENST00000553409 EIF4G1Q04637 1599 aaKnown RBP16.86■□□□□ 0.29
NRDE2-202ENST00000553409 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
NRDE2-202ENST00000553409 TNIKQ9UKE5 1360 aa16.85■□□□□ 0.29
NRDE2-202ENST00000553409 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
NRDE2-202ENST00000553409 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
NRDE2-202ENST00000553409 SOGA1O94964 1423 aa16.81■□□□□ 0.28
NRDE2-202ENST00000553409 UBTFP17480 764 aaKnown RBP16.8■□□□□ 0.28
NRDE2-202ENST00000553409 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
NRDE2-202ENST00000553409 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
NRDE2-202ENST00000553409 SUPT16HQ9Y5B9 1047 aaKnown RBP16.73■□□□□ 0.27
NRDE2-202ENST00000553409 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.27
NRDE2-202ENST00000553409 NACADO15069 1562 aa16.66■□□□□ 0.26
NRDE2-202ENST00000553409 CLSPNQ9HAW4 1339 aa16.65■□□□□ 0.26
NRDE2-202ENST00000553409 EEA1Q15075 1411 aa16.65■□□□□ 0.26
NRDE2-202ENST00000553409 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
NRDE2-202ENST00000553409 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
NRDE2-202ENST00000553409 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
NRDE2-202ENST00000553409 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
NRDE2-202ENST00000553409 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
NRDE2-202ENST00000553409 CLIP1P30622 1438 aa16.51■□□□□ 0.23
NRDE2-202ENST00000553409 APLP2Q06481 763 aa16.51■□□□□ 0.23
NRDE2-202ENST00000553409 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
NRDE2-202ENST00000553409 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
NRDE2-202ENST00000553409 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
NRDE2-202ENST00000553409 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
NRDE2-202ENST00000553409 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
NRDE2-202ENST00000553409 SMARCA4P51532 1647 aa16.42■□□□□ 0.22
NRDE2-202ENST00000553409 KCNH8Q96L42 1107 aa16.41■□□□□ 0.22
NRDE2-202ENST00000553409 BCANQ96GW7 911 aa16.39■□□□□ 0.22
NRDE2-202ENST00000553409 KIF21BO75037 1637 aa16.38■□□□□ 0.21
NRDE2-202ENST00000553409 RAPGEF2Q9Y4G8 1499 aa16.34■□□□□ 0.21
NRDE2-202ENST00000553409 FKBP8Q14318 412 aa16.32■□□□□ 0.2
NRDE2-202ENST00000553409 BAZ1BQ9UIG0 1483 aaKnown RBP16.3■□□□□ 0.2
NRDE2-202ENST00000553409 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
NRDE2-202ENST00000553409 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
NRDE2-202ENST00000553409 RBM19Q9Y4C8 960 aaKnown RBP16.26■□□□□ 0.19
NRDE2-202ENST00000553409 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
NRDE2-202ENST00000553409 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
NRDE2-202ENST00000553409 ITGAEP38570 1179 aa16.17■□□□□ 0.18
NRDE2-202ENST00000553409 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
NRDE2-202ENST00000553409 NEFLP07196 543 aa16.15■□□□□ 0.18
NRDE2-202ENST00000553409 CUX2O14529 1486 aa16.15■□□□□ 0.18
NRDE2-202ENST00000553409 CCNB3Q8WWL7 1395 aa16.12■□□□□ 0.17
NRDE2-202ENST00000553409 MSH5O43196 834 aa16.11■□□□□ 0.17
NRDE2-202ENST00000553409 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
NRDE2-202ENST00000553409 RAB3GAP2Q9H2M9 1393 aa16.09■□□□□ 0.17
NRDE2-202ENST00000553409 MAPKBP1O60336 1514 aa16.08■□□□□ 0.16
NRDE2-202ENST00000553409 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.16
NRDE2-202ENST00000553409 PPP1R15AO75807 674 aaPredicted RBP16.07■□□□□ 0.16
NRDE2-202ENST00000553409 SIN3AQ96ST3 1273 aa16.05■□□□□ 0.16
NRDE2-202ENST00000553409 PRXQ9BXM0 1461 aa16.05■□□□□ 0.16
NRDE2-202ENST00000553409 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
NRDE2-202ENST00000553409 HIRIP3Q9BW71 556 aaPredicted RBP16.03■□□□□ 0.16
NRDE2-202ENST00000553409 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
NRDE2-202ENST00000553409 ERICH3Q5RHP9 1530 aa16.02■□□□□ 0.15
NRDE2-202ENST00000553409 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
NRDE2-202ENST00000553409 PEG3Q9GZU2 1588 aa16.01■□□□□ 0.15
NRDE2-202ENST00000553409 ANP32CO43423 234 aa15.99■□□□□ 0.15
NRDE2-202ENST00000553409 TOP2BQ02880 1626 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 263.8 ms