RNA–Protein interactions for RNA: ENST00000552929.1

APAF1-212, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 3

Gene APAF1, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-212ENST00000552929 AEBP2Q6ZN18 517 aaPredicted RBP28.74■■■□□ 2.19
APAF1-212ENST00000552929 CHIC1Q5VXU3 224 aa27.17■■□□□ 1.94
APAF1-212ENST00000552929 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
APAF1-212ENST00000552929 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
APAF1-212ENST00000552929 FOXD1Q16676 465 aa22.97■■□□□ 1.27
APAF1-212ENST00000552929 MSH5O43196 834 aa21.77■■□□□ 1.08
APAF1-212ENST00000552929 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
APAF1-212ENST00000552929 NISCHQ9Y2I1 1504 aa21.69■■□□□ 1.06
APAF1-212ENST00000552929 POTEDQ86YR6 584 aa21.52■■□□□ 1.04
APAF1-212ENST00000552929 PIAS4Q8N2W9 510 aaPredicted RBP21.52■■□□□ 1.04
APAF1-212ENST00000552929 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
APAF1-212ENST00000552929 ADRA2BP18089 450 aa21.18■□□□□ 0.98
APAF1-212ENST00000552929 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
APAF1-212ENST00000552929 DMRT2Q9Y5R5 561 aa19.54■□□□□ 0.72
APAF1-212ENST00000552929 MAPK8IP2Q13387 824 aaPredicted RBP19.49■□□□□ 0.71
APAF1-212ENST00000552929 ABCC9O60706 1549 aa19.43■□□□□ 0.7
APAF1-212ENST00000552929 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
APAF1-212ENST00000552929 PPP4R3CPQ6ZMV5 832 aa18.91■□□□□ 0.62
APAF1-212ENST00000552929 DCAF8L1A6NGE4 600 aa18.83■□□□□ 0.6
APAF1-212ENST00000552929 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
APAF1-212ENST00000552929 HOXD11P31277 338 aaPredicted RBP18.7■□□□□ 0.58
APAF1-212ENST00000552929 CNKSR2Q8WXI2 1034 aa18.67■□□□□ 0.58
APAF1-212ENST00000552929 RNF216Q9NWF9 866 aaPredicted RBP18.55■□□□□ 0.56
APAF1-212ENST00000552929 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
APAF1-212ENST00000552929 DCAF8L2P0C7V8 631 aa18.43■□□□□ 0.54
APAF1-212ENST00000552929 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
APAF1-212ENST00000552929 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
APAF1-212ENST00000552929 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
APAF1-212ENST00000552929 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
APAF1-212ENST00000552929 PABPN1Q86U42 306 aaKnown RBP eCLIP18.23■□□□□ 0.51
APAF1-212ENST00000552929 NACADO15069 1562 aa18.22■□□□□ 0.51
APAF1-212ENST00000552929 ZCCHC6Q5VYS8 1495 aaKnown RBP17.97■□□□□ 0.47
APAF1-212ENST00000552929 MYO15BQ96JP2 1530 aa17.97■□□□□ 0.47
APAF1-212ENST00000552929 BICRAQ9NZM4 1560 aa17.94■□□□□ 0.46
APAF1-212ENST00000552929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
APAF1-212ENST00000552929 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
APAF1-212ENST00000552929 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
APAF1-212ENST00000552929 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
APAF1-212ENST00000552929 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
APAF1-212ENST00000552929 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
APAF1-212ENST00000552929 SHROOM4Q9ULL8 1493 aa17.45■□□□□ 0.38
APAF1-212ENST00000552929 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
APAF1-212ENST00000552929 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
APAF1-212ENST00000552929 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
APAF1-212ENST00000552929 CAPN15O75808 1086 aa17.3■□□□□ 0.36
APAF1-212ENST00000552929 KCNA4P22459 653 aa17.23■□□□□ 0.35
APAF1-212ENST00000552929 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
APAF1-212ENST00000552929 DSG3P32926 999 aa17.17■□□□□ 0.34
APAF1-212ENST00000552929 APLP2Q06481 763 aa17.16■□□□□ 0.34
APAF1-212ENST00000552929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
APAF1-212ENST00000552929 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
APAF1-212ENST00000552929 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
APAF1-212ENST00000552929 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
APAF1-212ENST00000552929 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
APAF1-212ENST00000552929 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
APAF1-212ENST00000552929 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
APAF1-212ENST00000552929 POTEHQ6S545 545 aa16.87■□□□□ 0.29
APAF1-212ENST00000552929 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
APAF1-212ENST00000552929 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
APAF1-212ENST00000552929 ABCB7O75027 752 aa16.82■□□□□ 0.28
APAF1-212ENST00000552929 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
APAF1-212ENST00000552929 NESP48681 1621 aa16.76■□□□□ 0.27
APAF1-212ENST00000552929 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
APAF1-212ENST00000552929 BAZ1AQ9NRL2 1556 aaPredicted RBP16.73■□□□□ 0.27
APAF1-212ENST00000552929 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
APAF1-212ENST00000552929 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
APAF1-212ENST00000552929 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
APAF1-212ENST00000552929 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
APAF1-212ENST00000552929 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
APAF1-212ENST00000552929 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
APAF1-212ENST00000552929 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
APAF1-212ENST00000552929 WIZO95785 1651 aa16.54■□□□□ 0.24
APAF1-212ENST00000552929 CUX2O14529 1486 aa16.54■□□□□ 0.24
APAF1-212ENST00000552929 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
APAF1-212ENST00000552929 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
APAF1-212ENST00000552929 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
APAF1-212ENST00000552929 LAMC3Q9Y6N6 1575 aa16.41■□□□□ 0.22
APAF1-212ENST00000552929 POLA2Q14181 598 aa16.4■□□□□ 0.22
APAF1-212ENST00000552929 PDS5BQ9NTI5 1447 aa16.38■□□□□ 0.21
APAF1-212ENST00000552929 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
APAF1-212ENST00000552929 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
APAF1-212ENST00000552929 TOP2AP11388 1531 aaKnown RBP16.26■□□□□ 0.19
APAF1-212ENST00000552929 FOXD4L1Q9NU39 408 aa16.26■□□□□ 0.19
APAF1-212ENST00000552929 MRC2Q9UBG0 1479 aa16.26■□□□□ 0.19
APAF1-212ENST00000552929 CFTRP13569 1480 aa16.25■□□□□ 0.19
APAF1-212ENST00000552929 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
APAF1-212ENST00000552929 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
APAF1-212ENST00000552929 CCDC88BA6NC98 1476 aa16.2■□□□□ 0.18
APAF1-212ENST00000552929 WDR62O43379 1518 aa16.19■□□□□ 0.18
APAF1-212ENST00000552929 CEP164Q9UPV0 1460 aa16.19■□□□□ 0.18
APAF1-212ENST00000552929 CHRDL2Q6WN34 429 aa16.19■□□□□ 0.18
APAF1-212ENST00000552929 URB2Q14146 1524 aaKnown RBP16.15■□□□□ 0.18
APAF1-212ENST00000552929 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
APAF1-212ENST00000552929 ATF5Q9Y2D1 282 aaPredicted RBP16.04■□□□□ 0.16
APAF1-212ENST00000552929 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
APAF1-212ENST00000552929 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
APAF1-212ENST00000552929 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
APAF1-212ENST00000552929 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
APAF1-212ENST00000552929 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
APAF1-212ENST00000552929 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms