RNA–Protein interactions for RNA: ENST00000552624.5

SYT1-211, Transcript of synaptotagmin 1, humanhuman

TSL 5

Gene SYT1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-211ENST00000552624 AEBP2Q6ZN18 517 aaPredicted RBP25.46■■□□□ 1.67
SYT1-211ENST00000552624 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
SYT1-211ENST00000552624 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
SYT1-211ENST00000552624 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
SYT1-211ENST00000552624 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
SYT1-211ENST00000552624 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
SYT1-211ENST00000552624 FOXD1Q16676 465 aa20■□□□□ 0.79
SYT1-211ENST00000552624 ADRA2BP18089 450 aa19.4■□□□□ 0.7
SYT1-211ENST00000552624 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
SYT1-211ENST00000552624 PIAS4Q8N2W9 510 aaPredicted RBP18.95■□□□□ 0.62
SYT1-211ENST00000552624 ABCC9O60706 1549 aa18.61■□□□□ 0.57
SYT1-211ENST00000552624 MSH5O43196 834 aa18.41■□□□□ 0.54
SYT1-211ENST00000552624 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
SYT1-211ENST00000552624 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
SYT1-211ENST00000552624 KCNA4P22459 653 aa17.9■□□□□ 0.46
SYT1-211ENST00000552624 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
SYT1-211ENST00000552624 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
SYT1-211ENST00000552624 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
SYT1-211ENST00000552624 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
SYT1-211ENST00000552624 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
SYT1-211ENST00000552624 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
SYT1-211ENST00000552624 NPM3O75607 178 aaKnown RBP17.41■□□□□ 0.38
SYT1-211ENST00000552624 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
SYT1-211ENST00000552624 PABPN1Q86U42 306 aaKnown RBP eCLIP17.27■□□□□ 0.36
SYT1-211ENST00000552624 NACADO15069 1562 aa17.24■□□□□ 0.35
SYT1-211ENST00000552624 DCAF8L2P0C7V8 631 aa17.15■□□□□ 0.34
SYT1-211ENST00000552624 RNF216Q9NWF9 866 aaPredicted RBP17.15■□□□□ 0.34
SYT1-211ENST00000552624 UNC13AQ9UPW8 1703 aa17.12■□□□□ 0.33
SYT1-211ENST00000552624 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
SYT1-211ENST00000552624 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.31
SYT1-211ENST00000552624 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
SYT1-211ENST00000552624 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
SYT1-211ENST00000552624 MYO15BQ96JP2 1530 aa16.83■□□□□ 0.28
SYT1-211ENST00000552624 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
SYT1-211ENST00000552624 CC2D2AQ9P2K1 1620 aa16.77■□□□□ 0.27
SYT1-211ENST00000552624 SHROOM4Q9ULL8 1493 aa16.66■□□□□ 0.26
SYT1-211ENST00000552624 DNAJC5Q9H3Z4 198 aa16.63■□□□□ 0.25
SYT1-211ENST00000552624 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
SYT1-211ENST00000552624 SCRIBQ14160 1630 aa16.57■□□□□ 0.24
SYT1-211ENST00000552624 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
SYT1-211ENST00000552624 DCAF8L1A6NGE4 600 aa16.53■□□□□ 0.24
SYT1-211ENST00000552624 ZCCHC6Q5VYS8 1495 aaKnown RBP16.53■□□□□ 0.24
SYT1-211ENST00000552624 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
SYT1-211ENST00000552624 ZBTB22O15209 634 aa16.46■□□□□ 0.23
SYT1-211ENST00000552624 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
SYT1-211ENST00000552624 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
SYT1-211ENST00000552624 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
SYT1-211ENST00000552624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
SYT1-211ENST00000552624 CUX2O14529 1486 aa16.15■□□□□ 0.18
SYT1-211ENST00000552624 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
SYT1-211ENST00000552624 ERCC6Q03468 1493 aa16.08■□□□□ 0.16
SYT1-211ENST00000552624 U3KPZ7 1027 aaPredicted RBP15.96■□□□□ 0.15
SYT1-211ENST00000552624 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
SYT1-211ENST00000552624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
SYT1-211ENST00000552624 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
SYT1-211ENST00000552624 NESP48681 1621 aa15.88■□□□□ 0.13
SYT1-211ENST00000552624 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
SYT1-211ENST00000552624 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
SYT1-211ENST00000552624 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
SYT1-211ENST00000552624 TRIM41Q8WV44 630 aa15.78■□□□□ 0.12
SYT1-211ENST00000552624 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
SYT1-211ENST00000552624 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
SYT1-211ENST00000552624 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.11
SYT1-211ENST00000552624 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
SYT1-211ENST00000552624 SMARCA4P51532 1647 aa15.73■□□□□ 0.11
SYT1-211ENST00000552624 APLP2Q06481 763 aa15.7■□□□□ 0.1
SYT1-211ENST00000552624 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
SYT1-211ENST00000552624 KIF21AQ7Z4S6 1674 aa15.64■□□□□ 0.09
SYT1-211ENST00000552624 LAMC3Q9Y6N6 1575 aa15.64■□□□□ 0.09
SYT1-211ENST00000552624 C1QBPQ07021 282 aaKnown RBP15.62■□□□□ 0.09
SYT1-211ENST00000552624 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
SYT1-211ENST00000552624 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
SYT1-211ENST00000552624 PDS5BQ9NTI5 1447 aa15.56■□□□□ 0.08
SYT1-211ENST00000552624 PEG3Q9GZU2 1588 aa15.54■□□□□ 0.08
SYT1-211ENST00000552624 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
SYT1-211ENST00000552624 MROH2BQ7Z745 1585 aa15.47■□□□□ 0.07
SYT1-211ENST00000552624 WDR62O43379 1518 aa15.44■□□□□ 0.06
SYT1-211ENST00000552624 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
SYT1-211ENST00000552624 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
SYT1-211ENST00000552624 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
SYT1-211ENST00000552624 CAPN15O75808 1086 aa15.4■□□□□ 0.06
SYT1-211ENST00000552624 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
SYT1-211ENST00000552624 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
SYT1-211ENST00000552624 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
SYT1-211ENST00000552624 FANCD2Q9BXW9 1451 aa15.28■□□□□ 0.04
SYT1-211ENST00000552624 WIZO95785 1651 aa15.27■□□□□ 0.03
SYT1-211ENST00000552624 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
SYT1-211ENST00000552624 RIMBP3BA6NNM3 1639 aa15.24■□□□□ 0.03
SYT1-211ENST00000552624 RIMBP3Q9UFD9 1639 aa15.24■□□□□ 0.03
SYT1-211ENST00000552624 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
SYT1-211ENST00000552624 URB2Q14146 1524 aaKnown RBP15.19■□□□□ 0.02
SYT1-211ENST00000552624 CFTRP13569 1480 aa15.17■□□□□ 0.02
SYT1-211ENST00000552624 POLA2Q14181 598 aa15.17■□□□□ 0.02
SYT1-211ENST00000552624 ARHGEF11O15085 1522 aa15.13■□□□□ 0.01
SYT1-211ENST00000552624 ABCB7O75027 752 aa15.11■□□□□ 0.01
SYT1-211ENST00000552624 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
SYT1-211ENST00000552624 DSG3P32926 999 aa15.08■□□□□ 0
SYT1-211ENST00000552624 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
SYT1-211ENST00000552624 IFT140Q96RY7 1462 aa15.02■□□□□ -0
SYT1-211ENST00000552624 TOP2AP11388 1531 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms