RNA–Protein interactions for RNA: ENST00000552123.1

NPIPB12-208, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 4

Gene NPIPB12, Length 464 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-208ENST00000552123 AEBP2Q6ZN18 517 aaPredicted RBP19.21■□□□□ 0.67
NPIPB12-208ENST00000552123 CHIC1Q5VXU3 224 aa18.76■□□□□ 0.59
NPIPB12-208ENST00000552123 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
NPIPB12-208ENST00000552123 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
NPIPB12-208ENST00000552123 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
NPIPB12-208ENST00000552123 PLPPR3Q6T4P5 718 aa15.26■□□□□ 0.03
NPIPB12-208ENST00000552123 FOXD1Q16676 465 aa15.18■□□□□ 0.02
NPIPB12-208ENST00000552123 DNAJC5BQ9UF47 199 aa14.66□□□□□ -0.06
NPIPB12-208ENST00000552123 ABCC9O60706 1549 aa14.6□□□□□ -0.07
NPIPB12-208ENST00000552123 ADRA2BP18089 450 aa14.52□□□□□ -0.09
NPIPB12-208ENST00000552123 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
NPIPB12-208ENST00000552123 DNAJC5Q9H3Z4 198 aa14.51□□□□□ -0.09
NPIPB12-208ENST00000552123 PIAS4Q8N2W9 510 aaPredicted RBP14.33□□□□□ -0.12
NPIPB12-208ENST00000552123 MSH5O43196 834 aa14.13□□□□□ -0.15
NPIPB12-208ENST00000552123 CCDC180Q9P1Z9 1646 aa13.59□□□□□ -0.23
NPIPB12-208ENST00000552123 RB1CC1Q8TDY2 1594 aa13.52□□□□□ -0.25
NPIPB12-208ENST00000552123 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
NPIPB12-208ENST00000552123 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
NPIPB12-208ENST00000552123 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
NPIPB12-208ENST00000552123 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
NPIPB12-208ENST00000552123 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
NPIPB12-208ENST00000552123 CUX2O14529 1486 aa13.23□□□□□ -0.29
NPIPB12-208ENST00000552123 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
NPIPB12-208ENST00000552123 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
NPIPB12-208ENST00000552123 NACADO15069 1562 aa13.15□□□□□ -0.3
NPIPB12-208ENST00000552123 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
NPIPB12-208ENST00000552123 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
NPIPB12-208ENST00000552123 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
NPIPB12-208ENST00000552123 ZCCHC6Q5VYS8 1495 aaKnown RBP13.06□□□□□ -0.32
NPIPB12-208ENST00000552123 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
NPIPB12-208ENST00000552123 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.32
NPIPB12-208ENST00000552123 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
NPIPB12-208ENST00000552123 DCAF1Q9Y4B6 1507 aa12.97□□□□□ -0.33
NPIPB12-208ENST00000552123 KCNA4P22459 653 aa12.94□□□□□ -0.34
NPIPB12-208ENST00000552123 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
NPIPB12-208ENST00000552123 EIF4G1Q04637 1599 aaKnown RBP12.87□□□□□ -0.35
NPIPB12-208ENST00000552123 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.35
NPIPB12-208ENST00000552123 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
NPIPB12-208ENST00000552123 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
NPIPB12-208ENST00000552123 ERCC6Q03468 1493 aa12.79□□□□□ -0.36
NPIPB12-208ENST00000552123 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
NPIPB12-208ENST00000552123 DCAF8L2P0C7V8 631 aa12.7□□□□□ -0.38
NPIPB12-208ENST00000552123 ILDR1Q86SU0 546 aaPredicted RBP12.58□□□□□ -0.4
NPIPB12-208ENST00000552123 DCAF8L1A6NGE4 600 aa12.53□□□□□ -0.4
NPIPB12-208ENST00000552123 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
NPIPB12-208ENST00000552123 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
NPIPB12-208ENST00000552123 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
NPIPB12-208ENST00000552123 THOC2Q8NI27 1593 aaKnown RBP12.34□□□□□ -0.43
NPIPB12-208ENST00000552123 SCRIBQ14160 1630 aa12.32□□□□□ -0.44
NPIPB12-208ENST00000552123 BAZ1AQ9NRL2 1556 aaPredicted RBP12.29□□□□□ -0.44
NPIPB12-208ENST00000552123 RIMBP3CA6NJZ7 1639 aa12.27□□□□□ -0.44
NPIPB12-208ENST00000552123 RIMBP3BA6NNM3 1639 aa12.27□□□□□ -0.44
NPIPB12-208ENST00000552123 RIMBP3Q9UFD9 1639 aa12.27□□□□□ -0.44
NPIPB12-208ENST00000552123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.45
NPIPB12-208ENST00000552123 NESP48681 1621 aa12.15□□□□□ -0.46
NPIPB12-208ENST00000552123 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
NPIPB12-208ENST00000552123 ARHGEF11O15085 1522 aa12.14□□□□□ -0.47
NPIPB12-208ENST00000552123 CYB5RLQ6IPT4 315 aa12.12□□□□□ -0.47
NPIPB12-208ENST00000552123 SMARCA2P51531 1590 aa12.11□□□□□ -0.47
NPIPB12-208ENST00000552123 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
NPIPB12-208ENST00000552123 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
NPIPB12-208ENST00000552123 LAMC3Q9Y6N6 1575 aa12.06□□□□□ -0.48
NPIPB12-208ENST00000552123 RNF39Q9H2S5 420 aa12.05□□□□□ -0.48
NPIPB12-208ENST00000552123 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
NPIPB12-208ENST00000552123 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
NPIPB12-208ENST00000552123 KIF21AQ7Z4S6 1674 aa11.98□□□□□ -0.49
NPIPB12-208ENST00000552123 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
NPIPB12-208ENST00000552123 WDR62O43379 1518 aa11.96□□□□□ -0.49
NPIPB12-208ENST00000552123 MRC2Q9UBG0 1479 aa11.96□□□□□ -0.49
NPIPB12-208ENST00000552123 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.49
NPIPB12-208ENST00000552123 MROH2BQ7Z745 1585 aa11.95□□□□□ -0.5
NPIPB12-208ENST00000552123 HMGXB3Q12766 1538 aa11.94□□□□□ -0.5
NPIPB12-208ENST00000552123 SOCS7O14512 581 aa11.93□□□□□ -0.5
NPIPB12-208ENST00000552123 U3KPZ7 1027 aaPredicted RBP11.93□□□□□ -0.5
NPIPB12-208ENST00000552123 LMTK3Q96Q04 1460 aa11.93□□□□□ -0.5
NPIPB12-208ENST00000552123 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
NPIPB12-208ENST00000552123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
NPIPB12-208ENST00000552123 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
NPIPB12-208ENST00000552123 FBXO41Q8TF61 875 aa11.91□□□□□ -0.5
NPIPB12-208ENST00000552123 ARAP1Q96P48 1450 aa11.9□□□□□ -0.5
NPIPB12-208ENST00000552123 MYCNP04198 464 aaPredicted RBP11.88□□□□□ -0.51
NPIPB12-208ENST00000552123 ATAD2BQ9ULI0 1458 aa11.88□□□□□ -0.51
NPIPB12-208ENST00000552123 PEG3Q9GZU2 1588 aa11.88□□□□□ -0.51
NPIPB12-208ENST00000552123 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
NPIPB12-208ENST00000552123 ZBTB22O15209 634 aa11.85□□□□□ -0.51
NPIPB12-208ENST00000552123 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.52
NPIPB12-208ENST00000552123 ERCC6L2Q5T890 1561 aa11.83□□□□□ -0.52
NPIPB12-208ENST00000552123 APLP2Q06481 763 aa11.82□□□□□ -0.52
NPIPB12-208ENST00000552123 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
NPIPB12-208ENST00000552123 WIZO95785 1651 aa11.81□□□□□ -0.52
NPIPB12-208ENST00000552123 CSRNP3Q8WYN3 585 aa11.78□□□□□ -0.52
NPIPB12-208ENST00000552123 TOP2AP11388 1531 aaKnown RBP11.77□□□□□ -0.52
NPIPB12-208ENST00000552123 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
NPIPB12-208ENST00000552123 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
NPIPB12-208ENST00000552123 CADPSQ9ULU8 1353 aa11.7□□□□□ -0.54
NPIPB12-208ENST00000552123 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
NPIPB12-208ENST00000552123 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
NPIPB12-208ENST00000552123 CAPN15O75808 1086 aa11.63□□□□□ -0.55
NPIPB12-208ENST00000552123 CCDC88BA6NC98 1476 aa11.62□□□□□ -0.55
NPIPB12-208ENST00000552123 ILDR2Q71H61 639 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms