RNA–Protein interactions for RNA: ENST00000548992.5

BRDT-220, Transcript of bromodomain testis associated, humanhuman

TSL 4

Gene BRDT, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRDT-220ENST00000548992 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
BRDT-220ENST00000548992 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
BRDT-220ENST00000548992 NISCHQ9Y2I1 1504 aa19.63■□□□□ 0.73
BRDT-220ENST00000548992 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
BRDT-220ENST00000548992 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
BRDT-220ENST00000548992 FOXD1Q16676 465 aa18.17■□□□□ 0.5
BRDT-220ENST00000548992 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
BRDT-220ENST00000548992 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
BRDT-220ENST00000548992 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
BRDT-220ENST00000548992 ADRA2BP18089 450 aa17.24■□□□□ 0.35
BRDT-220ENST00000548992 PIAS4Q8N2W9 510 aaPredicted RBP17.05■□□□□ 0.32
BRDT-220ENST00000548992 MSH5O43196 834 aa16.79■□□□□ 0.28
BRDT-220ENST00000548992 ABCC9O60706 1549 aa16.72■□□□□ 0.27
BRDT-220ENST00000548992 ZCCHC6Q5VYS8 1495 aaKnown RBP16.39■□□□□ 0.21
BRDT-220ENST00000548992 MYO15BQ96JP2 1530 aa16.3■□□□□ 0.2
BRDT-220ENST00000548992 DCAF1Q9Y4B6 1507 aa16.29■□□□□ 0.2
BRDT-220ENST00000548992 NACADO15069 1562 aa16.27■□□□□ 0.2
BRDT-220ENST00000548992 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
BRDT-220ENST00000548992 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
BRDT-220ENST00000548992 POTEDQ86YR6 584 aa16■□□□□ 0.15
BRDT-220ENST00000548992 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
BRDT-220ENST00000548992 PPP4R3CPQ6ZMV5 832 aa15.86■□□□□ 0.13
BRDT-220ENST00000548992 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
BRDT-220ENST00000548992 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
BRDT-220ENST00000548992 SCRIBQ14160 1630 aa15.77■□□□□ 0.12
BRDT-220ENST00000548992 BICRAQ9NZM4 1560 aa15.74■□□□□ 0.11
BRDT-220ENST00000548992 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
BRDT-220ENST00000548992 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
BRDT-220ENST00000548992 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
BRDT-220ENST00000548992 DMRT2Q9Y5R5 561 aa15.48■□□□□ 0.07
BRDT-220ENST00000548992 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
BRDT-220ENST00000548992 KCNA4P22459 653 aa15.36■□□□□ 0.05
BRDT-220ENST00000548992 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
BRDT-220ENST00000548992 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
BRDT-220ENST00000548992 DNAJC5BQ9UF47 199 aa15.24■□□□□ 0.03
BRDT-220ENST00000548992 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
BRDT-220ENST00000548992 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
BRDT-220ENST00000548992 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
BRDT-220ENST00000548992 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
BRDT-220ENST00000548992 CC2D2AQ9P2K1 1620 aa15.15■□□□□ 0.02
BRDT-220ENST00000548992 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
BRDT-220ENST00000548992 MROH2BQ7Z745 1585 aa15.11■□□□□ 0.01
BRDT-220ENST00000548992 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
BRDT-220ENST00000548992 PEG3Q9GZU2 1588 aa15.06■□□□□ 0
BRDT-220ENST00000548992 NCAPD3P42695 1498 aa15.05■□□□□ -0
BRDT-220ENST00000548992 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
BRDT-220ENST00000548992 SMARCA2P51531 1590 aa15.03■□□□□ -0
BRDT-220ENST00000548992 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
BRDT-220ENST00000548992 HMGXB3Q12766 1538 aa14.95□□□□□ -0.02
BRDT-220ENST00000548992 WIZO95785 1651 aa14.93□□□□□ -0.02
BRDT-220ENST00000548992 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
BRDT-220ENST00000548992 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
BRDT-220ENST00000548992 SUPT5HO00267 1087 aaKnown RBP14.75□□□□□ -0.05
BRDT-220ENST00000548992 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
BRDT-220ENST00000548992 CCDC88BA6NC98 1476 aa14.65□□□□□ -0.06
BRDT-220ENST00000548992 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
BRDT-220ENST00000548992 CFTRP13569 1480 aa14.57□□□□□ -0.08
BRDT-220ENST00000548992 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
BRDT-220ENST00000548992 NESP48681 1621 aa14.55□□□□□ -0.08
BRDT-220ENST00000548992 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
BRDT-220ENST00000548992 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
BRDT-220ENST00000548992 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
BRDT-220ENST00000548992 FANCD2Q9BXW9 1451 aa14.39□□□□□ -0.11
BRDT-220ENST00000548992 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
BRDT-220ENST00000548992 PRDM2Q13029 1718 aa14.37□□□□□ -0.11
BRDT-220ENST00000548992 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
BRDT-220ENST00000548992 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
BRDT-220ENST00000548992 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
BRDT-220ENST00000548992 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
BRDT-220ENST00000548992 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
BRDT-220ENST00000548992 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
BRDT-220ENST00000548992 WDR62O43379 1518 aa14.25□□□□□ -0.13
BRDT-220ENST00000548992 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
BRDT-220ENST00000548992 ABCC8Q09428 1581 aa14.23□□□□□ -0.13
BRDT-220ENST00000548992 CUX2O14529 1486 aa14.21□□□□□ -0.13
BRDT-220ENST00000548992 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
BRDT-220ENST00000548992 TOPBP1Q92547 1522 aa14.19□□□□□ -0.14
BRDT-220ENST00000548992 DNMBPQ6XZF7 1577 aa14.18□□□□□ -0.14
BRDT-220ENST00000548992 CUX1P39880 1505 aa14.16□□□□□ -0.14
BRDT-220ENST00000548992 C1QBPQ07021 282 aaKnown RBP14.16□□□□□ -0.14
BRDT-220ENST00000548992 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
BRDT-220ENST00000548992 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
BRDT-220ENST00000548992 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
BRDT-220ENST00000548992 TOP2BQ02880 1626 aa14.09□□□□□ -0.15
BRDT-220ENST00000548992 ZBTB22O15209 634 aa14.09□□□□□ -0.15
BRDT-220ENST00000548992 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
BRDT-220ENST00000548992 SYNJ1O43426 1573 aa14.08□□□□□ -0.16
BRDT-220ENST00000548992 BIVM-ERCC5R4GMW8 1640 aa14.08□□□□□ -0.16
BRDT-220ENST00000548992 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
BRDT-220ENST00000548992 FGD5Q6ZNL6 1462 aa14.06□□□□□ -0.16
BRDT-220ENST00000548992 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
BRDT-220ENST00000548992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.05□□□□□ -0.16
BRDT-220ENST00000548992 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
BRDT-220ENST00000548992 SOGA1O94964 1423 aa14.05□□□□□ -0.16
BRDT-220ENST00000548992 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
BRDT-220ENST00000548992 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
BRDT-220ENST00000548992 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
BRDT-220ENST00000548992 ABCA10Q8WWZ4 1543 aa13.98□□□□□ -0.17
BRDT-220ENST00000548992 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
BRDT-220ENST00000548992 ZNF608Q9ULD9 1512 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms