RNA–Protein interactions for RNA: ENST00000547924.1

CPM-206, Transcript of carboxypeptidase M, humanhuman

TSL 4

Gene CPM, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-206ENST00000547924 AEBP2Q6ZN18 517 aaPredicted RBP27.58■■■□□ 2.01
CPM-206ENST00000547924 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
CPM-206ENST00000547924 PHF23Q9BUL5 403 aaPredicted RBP23.89■■□□□ 1.41
CPM-206ENST00000547924 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
CPM-206ENST00000547924 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
CPM-206ENST00000547924 FOXD1Q16676 465 aa21.62■■□□□ 1.05
CPM-206ENST00000547924 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
CPM-206ENST00000547924 ADRA2BP18089 450 aa20.94■□□□□ 0.94
CPM-206ENST00000547924 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.89
CPM-206ENST00000547924 PIAS4Q8N2W9 510 aaPredicted RBP20.35■□□□□ 0.85
CPM-206ENST00000547924 MSH5O43196 834 aa19.76■□□□□ 0.75
CPM-206ENST00000547924 ABCC9O60706 1549 aa19.51■□□□□ 0.71
CPM-206ENST00000547924 PPP4R3CPQ6ZMV5 832 aa19.43■□□□□ 0.7
CPM-206ENST00000547924 KCNA4P22459 653 aa19.23■□□□□ 0.67
CPM-206ENST00000547924 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
CPM-206ENST00000547924 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
CPM-206ENST00000547924 MAPK8IP2Q13387 824 aaPredicted RBP18.97■□□□□ 0.63
CPM-206ENST00000547924 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
CPM-206ENST00000547924 CNKSR2Q8WXI2 1034 aa18.81■□□□□ 0.6
CPM-206ENST00000547924 NPM3O75607 178 aaKnown RBP18.73■□□□□ 0.59
CPM-206ENST00000547924 CCDC180Q9P1Z9 1646 aa18.7■□□□□ 0.58
CPM-206ENST00000547924 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
CPM-206ENST00000547924 RNF216Q9NWF9 866 aaPredicted RBP18.42■□□□□ 0.54
CPM-206ENST00000547924 HOXD11P31277 338 aaPredicted RBP18.34■□□□□ 0.53
CPM-206ENST00000547924 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
CPM-206ENST00000547924 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
CPM-206ENST00000547924 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
CPM-206ENST00000547924 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
CPM-206ENST00000547924 DNAJC5Q9H3Z4 198 aa17.9■□□□□ 0.46
CPM-206ENST00000547924 NACADO15069 1562 aa17.88■□□□□ 0.45
CPM-206ENST00000547924 ZBTB22O15209 634 aa17.78■□□□□ 0.44
CPM-206ENST00000547924 CSRNP3Q8WYN3 585 aa17.78■□□□□ 0.44
CPM-206ENST00000547924 DCAF8L2P0C7V8 631 aa17.76■□□□□ 0.43
CPM-206ENST00000547924 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
CPM-206ENST00000547924 UNC13AQ9UPW8 1703 aa17.74■□□□□ 0.43
CPM-206ENST00000547924 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
CPM-206ENST00000547924 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
CPM-206ENST00000547924 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
CPM-206ENST00000547924 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
CPM-206ENST00000547924 FOXD4L1Q9NU39 408 aa17.59■□□□□ 0.41
CPM-206ENST00000547924 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
CPM-206ENST00000547924 MYO15BQ96JP2 1530 aa17.38■□□□□ 0.37
CPM-206ENST00000547924 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.37
CPM-206ENST00000547924 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
CPM-206ENST00000547924 SHROOM4Q9ULL8 1493 aa17.33■□□□□ 0.37
CPM-206ENST00000547924 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
CPM-206ENST00000547924 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
CPM-206ENST00000547924 SCRIBQ14160 1630 aa17.08■□□□□ 0.32
CPM-206ENST00000547924 CUX2O14529 1486 aa17.05■□□□□ 0.32
CPM-206ENST00000547924 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
CPM-206ENST00000547924 ATXN8OSP0DMR3 200 aa16.95■□□□□ 0.3
CPM-206ENST00000547924 DCAF1Q9Y4B6 1507 aa16.91■□□□□ 0.3
CPM-206ENST00000547924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
CPM-206ENST00000547924 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
CPM-206ENST00000547924 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
CPM-206ENST00000547924 SAMD1Q6SPF0 538 aaPredicted RBP16.89■□□□□ 0.29
CPM-206ENST00000547924 ATF5Q9Y2D1 282 aaPredicted RBP16.88■□□□□ 0.29
CPM-206ENST00000547924 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
CPM-206ENST00000547924 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
CPM-206ENST00000547924 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
CPM-206ENST00000547924 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
CPM-206ENST00000547924 APLP2Q06481 763 aa16.64■□□□□ 0.25
CPM-206ENST00000547924 NESP48681 1621 aa16.56■□□□□ 0.24
CPM-206ENST00000547924 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
CPM-206ENST00000547924 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
CPM-206ENST00000547924 THOC2Q8NI27 1593 aaKnown RBP16.48■□□□□ 0.23
CPM-206ENST00000547924 CAPN15O75808 1086 aa16.48■□□□□ 0.23
CPM-206ENST00000547924 TRHP20396 242 aaPredicted RBP16.47■□□□□ 0.23
CPM-206ENST00000547924 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
CPM-206ENST00000547924 SMARCA2P51531 1590 aa16.36■□□□□ 0.21
CPM-206ENST00000547924 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
CPM-206ENST00000547924 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
CPM-206ENST00000547924 POLA2Q14181 598 aa16.28■□□□□ 0.2
CPM-206ENST00000547924 DSG3P32926 999 aa16.27■□□□□ 0.2
CPM-206ENST00000547924 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
CPM-206ENST00000547924 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
CPM-206ENST00000547924 ABCB7O75027 752 aa16.24■□□□□ 0.19
CPM-206ENST00000547924 PDS5BQ9NTI5 1447 aa16.22■□□□□ 0.19
CPM-206ENST00000547924 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
CPM-206ENST00000547924 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
CPM-206ENST00000547924 BAZ1AQ9NRL2 1556 aaPredicted RBP16.19■□□□□ 0.18
CPM-206ENST00000547924 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
CPM-206ENST00000547924 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
CPM-206ENST00000547924 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
CPM-206ENST00000547924 WDR62O43379 1518 aa16.1■□□□□ 0.17
CPM-206ENST00000547924 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
CPM-206ENST00000547924 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
CPM-206ENST00000547924 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
CPM-206ENST00000547924 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
CPM-206ENST00000547924 PEG3Q9GZU2 1588 aa16.02■□□□□ 0.16
CPM-206ENST00000547924 FKBP8Q14318 412 aa15.97■□□□□ 0.15
CPM-206ENST00000547924 FBLN2P98095 1184 aa15.96■□□□□ 0.15
CPM-206ENST00000547924 ZBTB12Q9Y330 459 aaPredicted RBP15.95■□□□□ 0.14
CPM-206ENST00000547924 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
CPM-206ENST00000547924 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
CPM-206ENST00000547924 CYB5RLQ6IPT4 315 aa15.9■□□□□ 0.14
CPM-206ENST00000547924 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
CPM-206ENST00000547924 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
CPM-206ENST00000547924 SPDYE4A6NLX3 237 aa15.77■□□□□ 0.12
CPM-206ENST00000547924 URB2Q14146 1524 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms