RNA–Protein interactions for RNA: ENST00000547887.1

HVCN1-206, Transcript of hydrogen voltage gated channel 1, humanhuman

TSL 5

Gene HVCN1, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-206ENST00000547887 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
HVCN1-206ENST00000547887 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
HVCN1-206ENST00000547887 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
HVCN1-206ENST00000547887 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
HVCN1-206ENST00000547887 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
HVCN1-206ENST00000547887 FOXD1Q16676 465 aa17.69■□□□□ 0.42
HVCN1-206ENST00000547887 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
HVCN1-206ENST00000547887 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
HVCN1-206ENST00000547887 ADRA2BP18089 450 aa17.05■□□□□ 0.32
HVCN1-206ENST00000547887 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
HVCN1-206ENST00000547887 MSH5O43196 834 aa16.22■□□□□ 0.19
HVCN1-206ENST00000547887 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
HVCN1-206ENST00000547887 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.08
HVCN1-206ENST00000547887 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
HVCN1-206ENST00000547887 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
HVCN1-206ENST00000547887 KCNA4P22459 653 aa15.43■□□□□ 0.06
HVCN1-206ENST00000547887 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
HVCN1-206ENST00000547887 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
HVCN1-206ENST00000547887 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
HVCN1-206ENST00000547887 ABCC9O60706 1549 aa15.2■□□□□ 0.02
HVCN1-206ENST00000547887 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
HVCN1-206ENST00000547887 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
HVCN1-206ENST00000547887 HOXD11P31277 338 aaPredicted RBP14.9□□□□□ -0.02
HVCN1-206ENST00000547887 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
HVCN1-206ENST00000547887 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
HVCN1-206ENST00000547887 RB1CC1Q8TDY2 1594 aa14.66□□□□□ -0.06
HVCN1-206ENST00000547887 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
HVCN1-206ENST00000547887 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
HVCN1-206ENST00000547887 NACADO15069 1562 aa14.63□□□□□ -0.07
HVCN1-206ENST00000547887 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.09
HVCN1-206ENST00000547887 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
HVCN1-206ENST00000547887 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
HVCN1-206ENST00000547887 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
HVCN1-206ENST00000547887 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
HVCN1-206ENST00000547887 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
HVCN1-206ENST00000547887 ZBTB22O15209 634 aa14.23□□□□□ -0.13
HVCN1-206ENST00000547887 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
HVCN1-206ENST00000547887 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.14
HVCN1-206ENST00000547887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
HVCN1-206ENST00000547887 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
HVCN1-206ENST00000547887 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
HVCN1-206ENST00000547887 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
HVCN1-206ENST00000547887 BICRAQ9NZM4 1560 aa14.09□□□□□ -0.15
HVCN1-206ENST00000547887 SHROOM4Q9ULL8 1493 aa14.08□□□□□ -0.16
HVCN1-206ENST00000547887 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
HVCN1-206ENST00000547887 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
HVCN1-206ENST00000547887 MYCNP04198 464 aaPredicted RBP13.91□□□□□ -0.18
HVCN1-206ENST00000547887 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
HVCN1-206ENST00000547887 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
HVCN1-206ENST00000547887 CC2D2AQ9P2K1 1620 aa13.73□□□□□ -0.21
HVCN1-206ENST00000547887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
HVCN1-206ENST00000547887 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
HVCN1-206ENST00000547887 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
HVCN1-206ENST00000547887 CECR2Q9BXF3 1484 aa13.68□□□□□ -0.22
HVCN1-206ENST00000547887 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
HVCN1-206ENST00000547887 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
HVCN1-206ENST00000547887 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
HVCN1-206ENST00000547887 CACNB1Q02641 598 aaPredicted RBP13.55□□□□□ -0.24
HVCN1-206ENST00000547887 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
HVCN1-206ENST00000547887 APLP2Q06481 763 aa13.54□□□□□ -0.24
HVCN1-206ENST00000547887 SMARCA4P51532 1647 aa13.52□□□□□ -0.25
HVCN1-206ENST00000547887 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
HVCN1-206ENST00000547887 CAPN15O75808 1086 aa13.5□□□□□ -0.25
HVCN1-206ENST00000547887 NCAPD3P42695 1498 aa13.47□□□□□ -0.25
HVCN1-206ENST00000547887 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
HVCN1-206ENST00000547887 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.25
HVCN1-206ENST00000547887 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
HVCN1-206ENST00000547887 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
HVCN1-206ENST00000547887 BAZ1BQ9UIG0 1483 aaKnown RBP13.4□□□□□ -0.26
HVCN1-206ENST00000547887 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
HVCN1-206ENST00000547887 PEG3Q9GZU2 1588 aa13.38□□□□□ -0.27
HVCN1-206ENST00000547887 DSG3P32926 999 aa13.3□□□□□ -0.28
HVCN1-206ENST00000547887 ABCB7O75027 752 aa13.29□□□□□ -0.28
HVCN1-206ENST00000547887 RSF1Q96T23 1441 aaPredicted RBP13.25□□□□□ -0.29
HVCN1-206ENST00000547887 POLA2Q14181 598 aa13.25□□□□□ -0.29
HVCN1-206ENST00000547887 WIZO95785 1651 aa13.24□□□□□ -0.29
HVCN1-206ENST00000547887 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
HVCN1-206ENST00000547887 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
HVCN1-206ENST00000547887 LAMC3Q9Y6N6 1575 aa13.15□□□□□ -0.3
HVCN1-206ENST00000547887 PDS5BQ9NTI5 1447 aa13.11□□□□□ -0.31
HVCN1-206ENST00000547887 NESP48681 1621 aa13.1□□□□□ -0.31
HVCN1-206ENST00000547887 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
HVCN1-206ENST00000547887 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
HVCN1-206ENST00000547887 CUX2O14529 1486 aa13.03□□□□□ -0.32
HVCN1-206ENST00000547887 CFTRP13569 1480 aa12.99□□□□□ -0.33
HVCN1-206ENST00000547887 CCDC88BA6NC98 1476 aa12.98□□□□□ -0.33
HVCN1-206ENST00000547887 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
HVCN1-206ENST00000547887 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
HVCN1-206ENST00000547887 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.34
HVCN1-206ENST00000547887 CEP164Q9UPV0 1460 aa12.95□□□□□ -0.34
HVCN1-206ENST00000547887 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
HVCN1-206ENST00000547887 FBLN2P98095 1184 aa12.94□□□□□ -0.34
HVCN1-206ENST00000547887 MRC2Q9UBG0 1479 aa12.92□□□□□ -0.34
HVCN1-206ENST00000547887 THOC2Q8NI27 1593 aaKnown RBP12.91□□□□□ -0.34
HVCN1-206ENST00000547887 PRDM2Q13029 1718 aa12.88□□□□□ -0.35
HVCN1-206ENST00000547887 WDR62O43379 1518 aa12.84□□□□□ -0.35
HVCN1-206ENST00000547887 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
HVCN1-206ENST00000547887 ABCC8Q09428 1581 aa12.8□□□□□ -0.36
HVCN1-206ENST00000547887 URB2Q14146 1524 aaKnown RBP12.76□□□□□ -0.37
HVCN1-206ENST00000547887 FKBP8Q14318 412 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms