RNA–Protein interactions for RNA: ENST00000547459.5

TWF1-204, Transcript of twinfilin actin binding protein 1, humanhuman

TSL 2

Gene TWF1, Length 3,320 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWF1-204ENST00000547459 NISCHQ9Y2I1 1504 aa32.75■■■□□ 2.83
TWF1-204ENST00000547459 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
TWF1-204ENST00000547459 SUPT5HO00267 1087 aaKnown RBP28.97■■■□□ 2.23
TWF1-204ENST00000547459 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
TWF1-204ENST00000547459 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
TWF1-204ENST00000547459 ZCCHC6Q5VYS8 1495 aaKnown RBP27.59■■■□□ 2.01
TWF1-204ENST00000547459 MYO15BQ96JP2 1530 aa27.45■■□□□ 1.99
TWF1-204ENST00000547459 PCGF6Q9BYE7 350 aa27.43■■□□□ 1.98
TWF1-204ENST00000547459 LOC105371045A0A1W2PR82 267 aa27.33■■□□□ 1.97
TWF1-204ENST00000547459 EHMT2Q96KQ7 1210 aa27.27■■□□□ 1.96
TWF1-204ENST00000547459 CCDC180Q9P1Z9 1646 aa27.1■■□□□ 1.93
TWF1-204ENST00000547459 PPARGC1BQ86YN6 1023 aaKnown RBP27.09■■□□□ 1.93
TWF1-204ENST00000547459 FAM9AQ8IZU1 332 aaPredicted RBP26.99■■□□□ 1.91
TWF1-204ENST00000547459 HRCP23327 699 aa26.96■■□□□ 1.91
TWF1-204ENST00000547459 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
TWF1-204ENST00000547459 SCRIBQ14160 1630 aa26.46■■□□□ 1.83
TWF1-204ENST00000547459 ABCC9O60706 1549 aa26.38■■□□□ 1.81
TWF1-204ENST00000547459 TTBK1Q5TCY1 1321 aaPredicted RBP26.31■■□□□ 1.8
TWF1-204ENST00000547459 TRIM26Q12899 539 aaPredicted RBP26.27■■□□□ 1.8
TWF1-204ENST00000547459 RSF1Q96T23 1441 aaPredicted RBP26.25■■□□□ 1.79
TWF1-204ENST00000547459 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
TWF1-204ENST00000547459 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
TWF1-204ENST00000547459 RB1CC1Q8TDY2 1594 aa26.01■■□□□ 1.75
TWF1-204ENST00000547459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.79■■□□□ 1.72
TWF1-204ENST00000547459 MROH2BQ7Z745 1585 aa25.75■■□□□ 1.71
TWF1-204ENST00000547459 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
TWF1-204ENST00000547459 RANGAP1P46060 587 aaPredicted RBP25.63■■□□□ 1.69
TWF1-204ENST00000547459 CCER1Q8TC90 406 aaPredicted RBP25.59■■□□□ 1.69
TWF1-204ENST00000547459 WIZO95785 1651 aa25.58■■□□□ 1.69
TWF1-204ENST00000547459 UBTFP17480 764 aaKnown RBP25.5■■□□□ 1.67
TWF1-204ENST00000547459 ZEB1P37275 1124 aaPredicted RBP25.48■■□□□ 1.67
TWF1-204ENST00000547459 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
TWF1-204ENST00000547459 NACADO15069 1562 aa25.35■■□□□ 1.65
TWF1-204ENST00000547459 CCDC88BA6NC98 1476 aa25.26■■□□□ 1.63
TWF1-204ENST00000547459 SOGA1O94964 1423 aa25.23■■□□□ 1.63
TWF1-204ENST00000547459 SCAF1Q9H7N4 1312 aaKnown RBP25.18■■□□□ 1.62
TWF1-204ENST00000547459 HNRNPUL2Q1KMD3 747 aaKnown RBP25.18■■□□□ 1.62
TWF1-204ENST00000547459 RUSC2Q8N2Y8 1516 aa25.13■■□□□ 1.61
TWF1-204ENST00000547459 CSRNP3Q8WYN3 585 aa25.11■■□□□ 1.61
TWF1-204ENST00000547459 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
TWF1-204ENST00000547459 YTHDC1Q96MU7 727 aaKnown RBP25.02■■□□□ 1.6
TWF1-204ENST00000547459 CEP162Q5TB80 1403 aa25.02■■□□□ 1.6
TWF1-204ENST00000547459 DIEXFQ68CQ4 756 aaKnown RBP24.99■■□□□ 1.59
TWF1-204ENST00000547459 NEUROD1Q13562 356 aa24.93■■□□□ 1.58
TWF1-204ENST00000547459 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
TWF1-204ENST00000547459 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.56
TWF1-204ENST00000547459 SMARCA2P51531 1590 aa24.82■■□□□ 1.56
TWF1-204ENST00000547459 APLP2Q06481 763 aa24.81■■□□□ 1.56
TWF1-204ENST00000547459 GTF3C3Q9Y5Q9 886 aa24.75■■□□□ 1.55
TWF1-204ENST00000547459 TNIKQ9UKE5 1360 aa24.73■■□□□ 1.55
TWF1-204ENST00000547459 WRNQ14191 1432 aaPredicted RBP eCLIP24.72■■□□□ 1.55
TWF1-204ENST00000547459 ACIN1Q9UKV3 1341 aaKnown RBP24.71■■□□□ 1.55
TWF1-204ENST00000547459 EIF4G1Q04637 1599 aaKnown RBP24.7■■□□□ 1.54
TWF1-204ENST00000547459 ITGAEP38570 1179 aa24.69■■□□□ 1.54
TWF1-204ENST00000547459 ZNF316A6NFI3 1004 aaPredicted RBP24.58■■□□□ 1.52
TWF1-204ENST00000547459 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.52
TWF1-204ENST00000547459 GOLGA3Q08378 1498 aa24.56■■□□□ 1.52
TWF1-204ENST00000547459 CLIP1P30622 1438 aa24.56■■□□□ 1.52
TWF1-204ENST00000547459 CENPBP07199 599 aaPredicted RBP24.55■■□□□ 1.52
TWF1-204ENST00000547459 MIER1Q8N108 512 aa24.53■■□□□ 1.52
TWF1-204ENST00000547459 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
TWF1-204ENST00000547459 ATP1B4Q9UN42 357 aaPredicted RBP24.45■■□□□ 1.5
TWF1-204ENST00000547459 SYNJ1O43426 1573 aa24.44■■□□□ 1.5
TWF1-204ENST00000547459 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
TWF1-204ENST00000547459 BAZ1BQ9UIG0 1483 aaKnown RBP24.43■■□□□ 1.5
TWF1-204ENST00000547459 KANK4Q5T7N3 995 aaPredicted RBP24.41■■□□□ 1.5
TWF1-204ENST00000547459 EEA1Q15075 1411 aa24.39■■□□□ 1.5
TWF1-204ENST00000547459 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
TWF1-204ENST00000547459 CEP164Q9UPV0 1460 aa24.35■■□□□ 1.49
TWF1-204ENST00000547459 P3H3Q8IVL6 736 aa24.33■■□□□ 1.49
TWF1-204ENST00000547459 VPS8Q8N3P4 1428 aa24.24■■□□□ 1.47
TWF1-204ENST00000547459 PELP1Q8IZL8 1130 aaKnown RBP24.13■■□□□ 1.45
TWF1-204ENST00000547459 KIF21BO75037 1637 aa24.09■■□□□ 1.45
TWF1-204ENST00000547459 FAM50AQ14320 339 aaKnown RBP24.08■■□□□ 1.44
TWF1-204ENST00000547459 HIRIP3Q9BW71 556 aaPredicted RBP24.07■■□□□ 1.44
TWF1-204ENST00000547459 ARAP1Q96P48 1450 aa23.97■■□□□ 1.43
TWF1-204ENST00000547459 KCNH8Q96L42 1107 aa23.97■■□□□ 1.43
TWF1-204ENST00000547459 DHX57Q6P158 1386 aaKnown RBP23.94■■□□□ 1.42
TWF1-204ENST00000547459 SIN3AQ96ST3 1273 aa23.93■■□□□ 1.42
TWF1-204ENST00000547459 PEG3Q9GZU2 1588 aa23.92■■□□□ 1.42
TWF1-204ENST00000547459 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
TWF1-204ENST00000547459 CUX1P39880 1505 aa23.86■■□□□ 1.41
TWF1-204ENST00000547459 CUX2O14529 1486 aa23.85■■□□□ 1.41
TWF1-204ENST00000547459 BCANQ96GW7 911 aa23.84■■□□□ 1.41
TWF1-204ENST00000547459 TOP2BQ02880 1626 aa23.83■■□□□ 1.41
TWF1-204ENST00000547459 ARID3CA6NKF2 412 aa23.83■■□□□ 1.41
TWF1-204ENST00000547459 PRXQ9BXM0 1461 aa23.82■■□□□ 1.4
TWF1-204ENST00000547459 DDX10Q13206 875 aaKnown RBP23.81■■□□□ 1.4
TWF1-204ENST00000547459 CCNB3Q8WWL7 1395 aa23.8■■□□□ 1.4
TWF1-204ENST00000547459 ARHGAP35Q9NRY4 1499 aa23.73■■□□□ 1.39
TWF1-204ENST00000547459 RAB3GAP2Q9H2M9 1393 aa23.72■■□□□ 1.39
TWF1-204ENST00000547459 IGF1RP08069 1367 aa23.72■■□□□ 1.39
TWF1-204ENST00000547459 CARMIL1Q5VZK9 1371 aa23.71■■□□□ 1.39
TWF1-204ENST00000547459 NCAPD3P42695 1498 aa23.67■■□□□ 1.38
TWF1-204ENST00000547459 PHLDB1Q86UU1 1377 aa23.61■■□□□ 1.37
TWF1-204ENST00000547459 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
TWF1-204ENST00000547459 CFTRP13569 1480 aa23.61■■□□□ 1.37
TWF1-204ENST00000547459 TRIM52Q96A61 297 aa23.59■■□□□ 1.37
TWF1-204ENST00000547459 FHOD3Q2V2M9 1422 aa23.59■■□□□ 1.37
TWF1-204ENST00000547459 SUPT16HQ9Y5B9 1047 aaKnown RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms