RNA–Protein interactions for RNA: ENST00000547136.1

TMEM106C-205, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 707 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-205ENST00000547136 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
TMEM106C-205ENST00000547136 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
TMEM106C-205ENST00000547136 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
TMEM106C-205ENST00000547136 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
TMEM106C-205ENST00000547136 FOXD1Q16676 465 aa17.26■□□□□ 0.35
TMEM106C-205ENST00000547136 POTEDQ86YR6 584 aa17■□□□□ 0.31
TMEM106C-205ENST00000547136 MSH5O43196 834 aa16.29■□□□□ 0.2
TMEM106C-205ENST00000547136 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
TMEM106C-205ENST00000547136 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
TMEM106C-205ENST00000547136 ADRA2BP18089 450 aa15.59■□□□□ 0.09
TMEM106C-205ENST00000547136 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
TMEM106C-205ENST00000547136 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
TMEM106C-205ENST00000547136 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
TMEM106C-205ENST00000547136 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
TMEM106C-205ENST00000547136 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
TMEM106C-205ENST00000547136 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
TMEM106C-205ENST00000547136 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
TMEM106C-205ENST00000547136 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
TMEM106C-205ENST00000547136 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
TMEM106C-205ENST00000547136 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
TMEM106C-205ENST00000547136 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
TMEM106C-205ENST00000547136 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
TMEM106C-205ENST00000547136 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
TMEM106C-205ENST00000547136 NISCHQ9Y2I1 1504 aa13.35□□□□□ -0.27
TMEM106C-205ENST00000547136 ABCC9O60706 1549 aa13.18□□□□□ -0.3
TMEM106C-205ENST00000547136 POTEHQ6S545 545 aa13.16□□□□□ -0.3
TMEM106C-205ENST00000547136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.33
TMEM106C-205ENST00000547136 DSG3P32926 999 aa12.83□□□□□ -0.36
TMEM106C-205ENST00000547136 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
TMEM106C-205ENST00000547136 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
TMEM106C-205ENST00000547136 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
TMEM106C-205ENST00000547136 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
TMEM106C-205ENST00000547136 CAPN15O75808 1086 aa12.67□□□□□ -0.38
TMEM106C-205ENST00000547136 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
TMEM106C-205ENST00000547136 CCDC180Q9P1Z9 1646 aa12.38□□□□□ -0.43
TMEM106C-205ENST00000547136 ABCB7O75027 752 aa12.35□□□□□ -0.43
TMEM106C-205ENST00000547136 TRHP20396 242 aaPredicted RBP12.34□□□□□ -0.43
TMEM106C-205ENST00000547136 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
TMEM106C-205ENST00000547136 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
TMEM106C-205ENST00000547136 APLP2Q06481 763 aa12.18□□□□□ -0.46
TMEM106C-205ENST00000547136 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
TMEM106C-205ENST00000547136 RB1CC1Q8TDY2 1594 aa12.18□□□□□ -0.46
TMEM106C-205ENST00000547136 RBM42Q9BTD8 480 aaKnown RBP12.16□□□□□ -0.46
TMEM106C-205ENST00000547136 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
TMEM106C-205ENST00000547136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
TMEM106C-205ENST00000547136 HNRNPUL2Q1KMD3 747 aaKnown RBP12.07□□□□□ -0.48
TMEM106C-205ENST00000547136 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
TMEM106C-205ENST00000547136 SAMD1Q6SPF0 538 aaPredicted RBP12.01□□□□□ -0.49
TMEM106C-205ENST00000547136 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
TMEM106C-205ENST00000547136 UNC13AQ9UPW8 1703 aa11.93□□□□□ -0.5
TMEM106C-205ENST00000547136 KCNA4P22459 653 aa11.91□□□□□ -0.5
TMEM106C-205ENST00000547136 POLA2Q14181 598 aa11.91□□□□□ -0.5
TMEM106C-205ENST00000547136 NACADO15069 1562 aa11.88□□□□□ -0.51
TMEM106C-205ENST00000547136 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
TMEM106C-205ENST00000547136 BICRAQ9NZM4 1560 aa11.85□□□□□ -0.51
TMEM106C-205ENST00000547136 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
TMEM106C-205ENST00000547136 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
TMEM106C-205ENST00000547136 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
TMEM106C-205ENST00000547136 REM2Q8IYK8 340 aaPredicted RBP11.72□□□□□ -0.53
TMEM106C-205ENST00000547136 HAX1O00165 279 aa11.69□□□□□ -0.54
TMEM106C-205ENST00000547136 CUX2O14529 1486 aa11.69□□□□□ -0.54
TMEM106C-205ENST00000547136 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
TMEM106C-205ENST00000547136 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
TMEM106C-205ENST00000547136 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
TMEM106C-205ENST00000547136 DCAF8L2P0C7V8 631 aa11.63□□□□□ -0.55
TMEM106C-205ENST00000547136 EVX2Q03828 476 aa11.63□□□□□ -0.55
TMEM106C-205ENST00000547136 SHROOM4Q9ULL8 1493 aa11.59□□□□□ -0.55
TMEM106C-205ENST00000547136 PITPNM1O00562 1244 aa11.59□□□□□ -0.55
TMEM106C-205ENST00000547136 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
TMEM106C-205ENST00000547136 OSCARQ8IYS5 282 aa11.54□□□□□ -0.56
TMEM106C-205ENST00000547136 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
TMEM106C-205ENST00000547136 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
TMEM106C-205ENST00000547136 MYO15BQ96JP2 1530 aa11.42□□□□□ -0.58
TMEM106C-205ENST00000547136 LHX8Q68G74 356 aa11.3□□□□□ -0.6
TMEM106C-205ENST00000547136 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
TMEM106C-205ENST00000547136 GABBR2O75899 941 aa11.26□□□□□ -0.61
TMEM106C-205ENST00000547136 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
TMEM106C-205ENST00000547136 FOXD4L1Q9NU39 408 aa11.25□□□□□ -0.61
TMEM106C-205ENST00000547136 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
TMEM106C-205ENST00000547136 SPDYE2BA6NHP3 402 aa11.19□□□□□ -0.62
TMEM106C-205ENST00000547136 SPDYE6P0CI01 402 aa11.19□□□□□ -0.62
TMEM106C-205ENST00000547136 SPDYE2Q495Y8 402 aa11.19□□□□□ -0.62
TMEM106C-205ENST00000547136 THOC2Q8NI27 1593 aaKnown RBP11.15□□□□□ -0.62
TMEM106C-205ENST00000547136 SPDYE1Q8NFV5 336 aaPredicted RBP11.12□□□□□ -0.63
TMEM106C-205ENST00000547136 CLEC11AQ9Y240 323 aa11.11□□□□□ -0.63
TMEM106C-205ENST00000547136 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
TMEM106C-205ENST00000547136 NESP48681 1621 aa11.08□□□□□ -0.64
TMEM106C-205ENST00000547136 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
TMEM106C-205ENST00000547136 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
TMEM106C-205ENST00000547136 SSUH2Q9Y2M2 353 aa11.03□□□□□ -0.64
TMEM106C-205ENST00000547136 CHADLQ6NUI6 762 aa11.02□□□□□ -0.65
TMEM106C-205ENST00000547136 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
TMEM106C-205ENST00000547136 SMARCA2P51531 1590 aa11.01□□□□□ -0.65
TMEM106C-205ENST00000547136 FBLN2P98095 1184 aa11□□□□□ -0.65
TMEM106C-205ENST00000547136 MKRN4PQ13434 485 aaPredicted RBP11□□□□□ -0.65
TMEM106C-205ENST00000547136 RIMBP3CA6NJZ7 1639 aa10.99□□□□□ -0.65
TMEM106C-205ENST00000547136 RIMBP3BA6NNM3 1639 aa10.99□□□□□ -0.65
TMEM106C-205ENST00000547136 RIMBP3Q9UFD9 1639 aa10.99□□□□□ -0.65
TMEM106C-205ENST00000547136 ZBTB22O15209 634 aa10.99□□□□□ -0.65
TMEM106C-205ENST00000547136 ATXN8OSP0DMR3 200 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms