RNA–Protein interactions for RNA: ENST00000539368.2

RNF115-201, Transcript of ring finger protein 115, humanhuman

TSL 1 (best)

Gene RNF115, Length 3,097 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF115-201ENST00000539368 NISCHQ9Y2I1 1504 aa11.61□□□□□ -0.55
RNF115-201ENST00000539368 AEBP2Q6ZN18 517 aaPredicted RBP11.2□□□□□ -0.62
RNF115-201ENST00000539368 CHIC1Q5VXU3 224 aa10.85□□□□□ -0.67
RNF115-201ENST00000539368 SHROOM4Q9ULL8 1493 aa9.88□□□□□ -0.83
RNF115-201ENST00000539368 ZCCHC6Q5VYS8 1495 aaKnown RBP9.86□□□□□ -0.83
RNF115-201ENST00000539368 CCDC180Q9P1Z9 1646 aa9.86□□□□□ -0.83
RNF115-201ENST00000539368 SUPT5HO00267 1087 aaKnown RBP9.8□□□□□ -0.84
RNF115-201ENST00000539368 SENP3Q9H4L4 574 aaPredicted RBP9.71□□□□□ -0.85
RNF115-201ENST00000539368 HRCP23327 699 aa9.7□□□□□ -0.86
RNF115-201ENST00000539368 DCAF1Q9Y4B6 1507 aa9.61□□□□□ -0.87
RNF115-201ENST00000539368 MYO15BQ96JP2 1530 aa9.6□□□□□ -0.87
RNF115-201ENST00000539368 PHF23Q9BUL5 403 aaPredicted RBP9.53□□□□□ -0.88
RNF115-201ENST00000539368 PCGF6Q9BYE7 350 aa9.51□□□□□ -0.89
RNF115-201ENST00000539368 DCAF8L2P0C7V8 631 aa9.46□□□□□ -0.9
RNF115-201ENST00000539368 TRIM26Q12899 539 aaPredicted RBP9.39□□□□□ -0.91
RNF115-201ENST00000539368 ZEB1P37275 1124 aaPredicted RBP9.37□□□□□ -0.91
RNF115-201ENST00000539368 ABCC9O60706 1549 aa9.35□□□□□ -0.91
RNF115-201ENST00000539368 PPARGC1BQ86YN6 1023 aaKnown RBP9.32□□□□□ -0.92
RNF115-201ENST00000539368 LOC105371045A0A1W2PR82 267 aa9.29□□□□□ -0.92
RNF115-201ENST00000539368 PELP1Q8IZL8 1130 aaKnown RBP9.26□□□□□ -0.93
RNF115-201ENST00000539368 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
RNF115-201ENST00000539368 RB1CC1Q8TDY2 1594 aa9.21□□□□□ -0.94
RNF115-201ENST00000539368 TRIM41Q8WV44 630 aa9.2□□□□□ -0.94
RNF115-201ENST00000539368 SCRIBQ14160 1630 aa9.15□□□□□ -0.94
RNF115-201ENST00000539368 NACADO15069 1562 aa9.07□□□□□ -0.96
RNF115-201ENST00000539368 FAM9AQ8IZU1 332 aaPredicted RBP9.02□□□□□ -0.97
RNF115-201ENST00000539368 SCAF1Q9H7N4 1312 aaKnown RBP8.98□□□□□ -0.97
RNF115-201ENST00000539368 BAZ1AQ9NRL2 1556 aaPredicted RBP8.98□□□□□ -0.97
RNF115-201ENST00000539368 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
RNF115-201ENST00000539368 CECR2Q9BXF3 1484 aa8.95□□□□□ -0.98
RNF115-201ENST00000539368 CCER1Q8TC90 406 aaPredicted RBP8.94□□□□□ -0.98
RNF115-201ENST00000539368 WRNQ14191 1432 aaPredicted RBP eCLIP8.93□□□□□ -0.98
RNF115-201ENST00000539368 CENPBP07199 599 aaPredicted RBP8.93□□□□□ -0.98
RNF115-201ENST00000539368 FOXD1Q16676 465 aa8.93□□□□□ -0.98
RNF115-201ENST00000539368 EIF4G1Q04637 1599 aaKnown RBP8.93□□□□□ -0.98
RNF115-201ENST00000539368 MYT1Q01538 1121 aa8.92□□□□□ -0.98
RNF115-201ENST00000539368 WIZO95785 1651 aa8.92□□□□□ -0.98
RNF115-201ENST00000539368 ACIN1Q9UKV3 1341 aaKnown RBP8.91□□□□□ -0.98
RNF115-201ENST00000539368 EEA1Q15075 1411 aa8.9□□□□□ -0.99
RNF115-201ENST00000539368 TOP2AP11388 1531 aaKnown RBP8.88□□□□□ -0.99
RNF115-201ENST00000539368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.86□□□□□ -0.99
RNF115-201ENST00000539368 EHMT2Q96KQ7 1210 aa8.86□□□□□ -0.99
RNF115-201ENST00000539368 DIEXFQ68CQ4 756 aaKnown RBP8.86□□□□□ -0.99
RNF115-201ENST00000539368 TNIKQ9UKE5 1360 aa8.85□□□□□ -0.99
RNF115-201ENST00000539368 CEP162Q5TB80 1403 aa8.84□□□□□ -0.99
RNF115-201ENST00000539368 NEUROD1Q13562 356 aa8.81□□□□□ -1
RNF115-201ENST00000539368 SMARCA4P51532 1647 aa8.8□□□□□ -1
RNF115-201ENST00000539368 SMARCA2P51531 1590 aa8.79□□□□□ -1
RNF115-201ENST00000539368 CCDC88BA6NC98 1476 aa8.79□□□□□ -1
RNF115-201ENST00000539368 GOLGA3Q08378 1498 aa8.78□□□□□ -1
RNF115-201ENST00000539368 PLPPR3Q6T4P5 718 aa8.78□□□□□ -1
RNF115-201ENST00000539368 ZNF316A6NFI3 1004 aaPredicted RBP8.77□□□□□ -1
RNF115-201ENST00000539368 GTF3C3Q9Y5Q9 886 aa8.77□□□□□ -1.01
RNF115-201ENST00000539368 ABCC8Q09428 1581 aa8.77□□□□□ -1.01
RNF115-201ENST00000539368 CSRNP3Q8WYN3 585 aa8.77□□□□□ -1.01
RNF115-201ENST00000539368 SOGA1O94964 1423 aa8.73□□□□□ -1.01
RNF115-201ENST00000539368 UBTFP17480 764 aaKnown RBP8.72□□□□□ -1.01
RNF115-201ENST00000539368 CEP164Q9UPV0 1460 aa8.72□□□□□ -1.01
RNF115-201ENST00000539368 KIF21BO75037 1637 aa8.7□□□□□ -1.02
RNF115-201ENST00000539368 BAZ1BQ9UIG0 1483 aaKnown RBP8.68□□□□□ -1.02
RNF115-201ENST00000539368 CLSPNQ9HAW4 1339 aa8.67□□□□□ -1.02
RNF115-201ENST00000539368 PEG3Q9GZU2 1588 aa8.67□□□□□ -1.02
RNF115-201ENST00000539368 APLP2Q06481 763 aa8.66□□□□□ -1.02
RNF115-201ENST00000539368 TTBK1Q5TCY1 1321 aaPredicted RBP8.66□□□□□ -1.02
RNF115-201ENST00000539368 VPS8Q8N3P4 1428 aa8.66□□□□□ -1.02
RNF115-201ENST00000539368 CLIP1P30622 1438 aa8.65□□□□□ -1.02
RNF115-201ENST00000539368 RUSC2Q8N2Y8 1516 aa8.64□□□□□ -1.03
RNF115-201ENST00000539368 UNC13AQ9UPW8 1703 aa8.62□□□□□ -1.03
RNF115-201ENST00000539368 SYNJ1O43426 1573 aa8.59□□□□□ -1.03
RNF115-201ENST00000539368 HNRNPUL2Q1KMD3 747 aaKnown RBP8.59□□□□□ -1.03
RNF115-201ENST00000539368 YTHDC1Q96MU7 727 aaKnown RBP8.59□□□□□ -1.03
RNF115-201ENST00000539368 MIER1Q8N108 512 aa8.58□□□□□ -1.04
RNF115-201ENST00000539368 ERICH3Q5RHP9 1530 aa8.56□□□□□ -1.04
RNF115-201ENST00000539368 RAPGEF2Q9Y4G8 1499 aa8.53□□□□□ -1.04
RNF115-201ENST00000539368 BICRAQ9NZM4 1560 aa8.53□□□□□ -1.04
RNF115-201ENST00000539368 TOP2BQ02880 1626 aa8.53□□□□□ -1.04
RNF115-201ENST00000539368 ATAD2BQ9ULI0 1458 aa8.53□□□□□ -1.04
RNF115-201ENST00000539368 DHX57Q6P158 1386 aaKnown RBP8.5□□□□□ -1.05
RNF115-201ENST00000539368 BIVM-ERCC5R4GMW8 1640 aa8.5□□□□□ -1.05
RNF115-201ENST00000539368 CUX2O14529 1486 aa8.48□□□□□ -1.05
RNF115-201ENST00000539368 PRXQ9BXM0 1461 aa8.48□□□□□ -1.05
RNF115-201ENST00000539368 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
RNF115-201ENST00000539368 ARAP1Q96P48 1450 aa8.46□□□□□ -1.06
RNF115-201ENST00000539368 MSH5O43196 834 aa8.45□□□□□ -1.06
RNF115-201ENST00000539368 PABPN1Q86U42 306 aaKnown RBP eCLIP8.45□□□□□ -1.06
RNF115-201ENST00000539368 KIF27Q86VH2 1401 aa8.44□□□□□ -1.06
RNF115-201ENST00000539368 PIAS4Q8N2W9 510 aaPredicted RBP8.43□□□□□ -1.06
RNF115-201ENST00000539368 CCNB3Q8WWL7 1395 aa8.43□□□□□ -1.06
RNF115-201ENST00000539368 SUPT16HQ9Y5B9 1047 aaKnown RBP8.43□□□□□ -1.06
RNF115-201ENST00000539368 MAP3K1Q13233 1512 aa8.41□□□□□ -1.06
RNF115-201ENST00000539368 HMGXB3Q12766 1538 aa8.4□□□□□ -1.06
RNF115-201ENST00000539368 RANGAP1P46060 587 aaPredicted RBP8.39□□□□□ -1.07
RNF115-201ENST00000539368 ADRA2BP18089 450 aa8.39□□□□□ -1.07
RNF115-201ENST00000539368 KANK4Q5T7N3 995 aaPredicted RBP8.38□□□□□ -1.07
RNF115-201ENST00000539368 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
RNF115-201ENST00000539368 PPP6R1Q9UPN7 881 aa8.37□□□□□ -1.07
RNF115-201ENST00000539368 NCAPD3P42695 1498 aa8.36□□□□□ -1.07
RNF115-201ENST00000539368 CUX1P39880 1505 aa8.36□□□□□ -1.07
RNF115-201ENST00000539368 ARHGAP35Q9NRY4 1499 aa8.36□□□□□ -1.07
RNF115-201ENST00000539368 SETD5Q9C0A6 1442 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms