RNA–Protein interactions for RNA: ENST00000538326.5

MEFV-206, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

TSL 5

Gene MEFV, Length 3,597 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-206ENST00000538326 NISCHQ9Y2I1 1504 aa28.03■■■□□ 2.08
MEFV-206ENST00000538326 SHROOM4Q9ULL8 1493 aa24.23■■□□□ 1.47
MEFV-206ENST00000538326 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
MEFV-206ENST00000538326 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
MEFV-206ENST00000538326 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
MEFV-206ENST00000538326 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
MEFV-206ENST00000538326 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
MEFV-206ENST00000538326 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
MEFV-206ENST00000538326 HRCP23327 699 aa23.35■■□□□ 1.33
MEFV-206ENST00000538326 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
MEFV-206ENST00000538326 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
MEFV-206ENST00000538326 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
MEFV-206ENST00000538326 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
MEFV-206ENST00000538326 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
MEFV-206ENST00000538326 PELP1Q8IZL8 1130 aaKnown RBP22.61■■□□□ 1.21
MEFV-206ENST00000538326 ABCC9O60706 1549 aa22.42■■□□□ 1.18
MEFV-206ENST00000538326 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
MEFV-206ENST00000538326 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
MEFV-206ENST00000538326 FAM9AQ8IZU1 332 aaPredicted RBP22.28■■□□□ 1.16
MEFV-206ENST00000538326 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
MEFV-206ENST00000538326 TRIM41Q8WV44 630 aa22.26■■□□□ 1.15
MEFV-206ENST00000538326 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
MEFV-206ENST00000538326 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
MEFV-206ENST00000538326 ZEB1P37275 1124 aaPredicted RBP22.07■■□□□ 1.12
MEFV-206ENST00000538326 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
MEFV-206ENST00000538326 CECR2Q9BXF3 1484 aa21.89■■□□□ 1.09
MEFV-206ENST00000538326 YTHDC1Q96MU7 727 aaKnown RBP21.88■■□□□ 1.09
MEFV-206ENST00000538326 CCER1Q8TC90 406 aaPredicted RBP21.87■■□□□ 1.09
MEFV-206ENST00000538326 GTF3C3Q9Y5Q9 886 aa21.84■■□□□ 1.09
MEFV-206ENST00000538326 CENPBP07199 599 aaPredicted RBP21.83■■□□□ 1.09
MEFV-206ENST00000538326 NACADO15069 1562 aa21.83■■□□□ 1.09
MEFV-206ENST00000538326 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
MEFV-206ENST00000538326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.07
MEFV-206ENST00000538326 NEUROD1Q13562 356 aa21.73■■□□□ 1.07
MEFV-206ENST00000538326 ACIN1Q9UKV3 1341 aaKnown RBP21.7■■□□□ 1.06
MEFV-206ENST00000538326 MYT1Q01538 1121 aa21.7■■□□□ 1.06
MEFV-206ENST00000538326 WIZO95785 1651 aa21.68■■□□□ 1.06
MEFV-206ENST00000538326 DIEXFQ68CQ4 756 aaKnown RBP21.58■■□□□ 1.05
MEFV-206ENST00000538326 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
MEFV-206ENST00000538326 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
MEFV-206ENST00000538326 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
MEFV-206ENST00000538326 CCDC88BA6NC98 1476 aa21.33■■□□□ 1.01
MEFV-206ENST00000538326 ABCC8Q09428 1581 aa21.33■■□□□ 1.01
MEFV-206ENST00000538326 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■■□□□ 1
MEFV-206ENST00000538326 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
MEFV-206ENST00000538326 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
MEFV-206ENST00000538326 SOGA1O94964 1423 aa21.24■□□□□ 0.99
MEFV-206ENST00000538326 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
MEFV-206ENST00000538326 TNIKQ9UKE5 1360 aa21.21■□□□□ 0.99
MEFV-206ENST00000538326 CSRNP3Q8WYN3 585 aa21.2■□□□□ 0.98
MEFV-206ENST00000538326 UBTFP17480 764 aaKnown RBP21.19■□□□□ 0.98
MEFV-206ENST00000538326 EEA1Q15075 1411 aa21.15■□□□□ 0.98
MEFV-206ENST00000538326 RUSC2Q8N2Y8 1516 aa21.1■□□□□ 0.97
MEFV-206ENST00000538326 GOLGA3Q08378 1498 aa21.03■□□□□ 0.96
MEFV-206ENST00000538326 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
MEFV-206ENST00000538326 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
MEFV-206ENST00000538326 UNC13AQ9UPW8 1703 aa21■□□□□ 0.95
MEFV-206ENST00000538326 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
MEFV-206ENST00000538326 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
MEFV-206ENST00000538326 MIER1Q8N108 512 aa20.93■□□□□ 0.94
MEFV-206ENST00000538326 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
MEFV-206ENST00000538326 BCANQ96GW7 911 aa20.86■□□□□ 0.93
MEFV-206ENST00000538326 CLIP1P30622 1438 aa20.83■□□□□ 0.92
MEFV-206ENST00000538326 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
MEFV-206ENST00000538326 APLP2Q06481 763 aa20.8■□□□□ 0.92
MEFV-206ENST00000538326 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
MEFV-206ENST00000538326 SYNJ1O43426 1573 aa20.8■□□□□ 0.92
MEFV-206ENST00000538326 KIF21BO75037 1637 aa20.77■□□□□ 0.92
MEFV-206ENST00000538326 VPS8Q8N3P4 1428 aa20.74■□□□□ 0.91
MEFV-206ENST00000538326 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
MEFV-206ENST00000538326 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
MEFV-206ENST00000538326 RAPGEF2Q9Y4G8 1499 aa20.69■□□□□ 0.9
MEFV-206ENST00000538326 BCL11AQ9H165 835 aa20.55■□□□□ 0.88
MEFV-206ENST00000538326 ERICH6Q7L0X2 663 aa20.52■□□□□ 0.88
MEFV-206ENST00000538326 TOP2BQ02880 1626 aa20.51■□□□□ 0.87
MEFV-206ENST00000538326 ITGAEP38570 1179 aa20.48■□□□□ 0.87
MEFV-206ENST00000538326 ANP32EQ9BTT0 268 aa20.48■□□□□ 0.87
MEFV-206ENST00000538326 SUPT16HQ9Y5B9 1047 aaKnown RBP20.48■□□□□ 0.87
MEFV-206ENST00000538326 NEFLP07196 543 aa20.47■□□□□ 0.87
MEFV-206ENST00000538326 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
MEFV-206ENST00000538326 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
MEFV-206ENST00000538326 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
MEFV-206ENST00000538326 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
MEFV-206ENST00000538326 ERICH3Q5RHP9 1530 aa20.41■□□□□ 0.86
MEFV-206ENST00000538326 ARAP1Q96P48 1450 aa20.4■□□□□ 0.86
MEFV-206ENST00000538326 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
MEFV-206ENST00000538326 FKBP8Q14318 412 aa20.38■□□□□ 0.85
MEFV-206ENST00000538326 TSHZ2Q9NRE2 1034 aa20.35■□□□□ 0.85
MEFV-206ENST00000538326 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
MEFV-206ENST00000538326 RRBP1Q9P2E9 1410 aaKnown RBP20.29■□□□□ 0.84
MEFV-206ENST00000538326 CUX1P39880 1505 aa20.28■□□□□ 0.84
MEFV-206ENST00000538326 NCAPD3P42695 1498 aa20.25■□□□□ 0.83
MEFV-206ENST00000538326 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
MEFV-206ENST00000538326 HMGXB3Q12766 1538 aa20.21■□□□□ 0.83
MEFV-206ENST00000538326 ARHGAP35Q9NRY4 1499 aa20.2■□□□□ 0.82
MEFV-206ENST00000538326 TRIM52Q96A61 297 aa20.17■□□□□ 0.82
MEFV-206ENST00000538326 CUX2O14529 1486 aa20.17■□□□□ 0.82
MEFV-206ENST00000538326 CFTRP13569 1480 aa20.16■□□□□ 0.82
MEFV-206ENST00000538326 KCNH8Q96L42 1107 aa20.14■□□□□ 0.82
MEFV-206ENST00000538326 DDX10Q13206 875 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms