RNA–Protein interactions for RNA: ENST00000535205.5

PPME1-203, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 2

Gene PPME1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-203ENST00000535205 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
PPME1-203ENST00000535205 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
PPME1-203ENST00000535205 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
PPME1-203ENST00000535205 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
PPME1-203ENST00000535205 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
PPME1-203ENST00000535205 NISCHQ9Y2I1 1504 aa17.24■□□□□ 0.35
PPME1-203ENST00000535205 FOXD1Q16676 465 aa16.67■□□□□ 0.26
PPME1-203ENST00000535205 ADRA2BP18089 450 aa16.42■□□□□ 0.22
PPME1-203ENST00000535205 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
PPME1-203ENST00000535205 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
PPME1-203ENST00000535205 KCNA4P22459 653 aa15.58■□□□□ 0.08
PPME1-203ENST00000535205 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
PPME1-203ENST00000535205 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
PPME1-203ENST00000535205 MSH5O43196 834 aa15.2■□□□□ 0.02
PPME1-203ENST00000535205 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
PPME1-203ENST00000535205 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
PPME1-203ENST00000535205 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
PPME1-203ENST00000535205 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
PPME1-203ENST00000535205 SLC4A1APQ9BWU0 796 aaKnown RBP14.92□□□□□ -0.02
PPME1-203ENST00000535205 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
PPME1-203ENST00000535205 ABCC9O60706 1549 aa14.85□□□□□ -0.03
PPME1-203ENST00000535205 MAPK8IP2Q13387 824 aaPredicted RBP14.76□□□□□ -0.05
PPME1-203ENST00000535205 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
PPME1-203ENST00000535205 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
PPME1-203ENST00000535205 RNF216Q9NWF9 866 aaPredicted RBP14.49□□□□□ -0.09
PPME1-203ENST00000535205 DMRT2Q9Y5R5 561 aa14.45□□□□□ -0.1
PPME1-203ENST00000535205 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
PPME1-203ENST00000535205 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
PPME1-203ENST00000535205 ZBTB22O15209 634 aa14.35□□□□□ -0.11
PPME1-203ENST00000535205 NACADO15069 1562 aa14.31□□□□□ -0.12
PPME1-203ENST00000535205 MYO15BQ96JP2 1530 aa14.31□□□□□ -0.12
PPME1-203ENST00000535205 HOXD11P31277 338 aaPredicted RBP14.3□□□□□ -0.12
PPME1-203ENST00000535205 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
PPME1-203ENST00000535205 DCAF1Q9Y4B6 1507 aa14.27□□□□□ -0.12
PPME1-203ENST00000535205 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
PPME1-203ENST00000535205 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
PPME1-203ENST00000535205 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
PPME1-203ENST00000535205 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
PPME1-203ENST00000535205 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
PPME1-203ENST00000535205 SCRIBQ14160 1630 aa13.96□□□□□ -0.17
PPME1-203ENST00000535205 DCAF8L1A6NGE4 600 aa13.87□□□□□ -0.19
PPME1-203ENST00000535205 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
PPME1-203ENST00000535205 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
PPME1-203ENST00000535205 SHROOM4Q9ULL8 1493 aa13.74□□□□□ -0.21
PPME1-203ENST00000535205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.221e-9■■■■□ 19.6
PPME1-203ENST00000535205 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
PPME1-203ENST00000535205 EIF4G1Q04637 1599 aaKnown RBP13.56□□□□□ -0.24
PPME1-203ENST00000535205 CC2D2AQ9P2K1 1620 aa13.5□□□□□ -0.25
PPME1-203ENST00000535205 U3KPZ7 1027 aaPredicted RBP13.49□□□□□ -0.25
PPME1-203ENST00000535205 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
PPME1-203ENST00000535205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.25
PPME1-203ENST00000535205 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.25
PPME1-203ENST00000535205 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
PPME1-203ENST00000535205 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
PPME1-203ENST00000535205 SMARCA4P51532 1647 aa13.39□□□□□ -0.27
PPME1-203ENST00000535205 MROH2BQ7Z745 1585 aa13.33□□□□□ -0.28
PPME1-203ENST00000535205 BAZ1AQ9NRL2 1556 aaPredicted RBP13.3□□□□□ -0.28
PPME1-203ENST00000535205 PEG3Q9GZU2 1588 aa13.29□□□□□ -0.28
PPME1-203ENST00000535205 ATAD2BQ9ULI0 1458 aa13.27□□□□□ -0.29
PPME1-203ENST00000535205 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
PPME1-203ENST00000535205 APLP2Q06481 763 aa13.22□□□□□ -0.29
PPME1-203ENST00000535205 FKBP8Q14318 412 aa13.21□□□□□ -0.29
PPME1-203ENST00000535205 HMGXB3Q12766 1538 aa13.2□□□□□ -0.3
PPME1-203ENST00000535205 WIZO95785 1651 aa13.19□□□□□ -0.3
PPME1-203ENST00000535205 SMARCA2P51531 1590 aa13.18□□□□□ -0.3
PPME1-203ENST00000535205 RSF1Q96T23 1441 aaPredicted RBP13.16□□□□□ -0.3
PPME1-203ENST00000535205 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
PPME1-203ENST00000535205 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
PPME1-203ENST00000535205 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
PPME1-203ENST00000535205 TOP2AP11388 1531 aaKnown RBP13.02□□□□□ -0.33
PPME1-203ENST00000535205 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
PPME1-203ENST00000535205 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
PPME1-203ENST00000535205 CAPN15O75808 1086 aa12.95□□□□□ -0.34
PPME1-203ENST00000535205 NESP48681 1621 aa12.95□□□□□ -0.34
PPME1-203ENST00000535205 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
PPME1-203ENST00000535205 POLA2Q14181 598 aa12.85□□□□□ -0.35
PPME1-203ENST00000535205 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
PPME1-203ENST00000535205 LAMC3Q9Y6N6 1575 aa12.84□□□□□ -0.35
PPME1-203ENST00000535205 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
PPME1-203ENST00000535205 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
PPME1-203ENST00000535205 FBLN2P98095 1184 aa12.81□□□□□ -0.36
PPME1-203ENST00000535205 THOC2Q8NI27 1593 aaKnown RBP12.8□□□□□ -0.36
PPME1-203ENST00000535205 CFTRP13569 1480 aa12.79□□□□□ -0.36
PPME1-203ENST00000535205 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
PPME1-203ENST00000535205 AMER1Q5JTC6 1135 aaPredicted RBP12.78□□□□□ -0.36
PPME1-203ENST00000535205 RTN4Q9NQC3 1192 aaKnown RBP12.78□□□□□ -0.36
PPME1-203ENST00000535205 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
PPME1-203ENST00000535205 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
PPME1-203ENST00000535205 ABCB7O75027 752 aa12.76□□□□□ -0.37
PPME1-203ENST00000535205 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
PPME1-203ENST00000535205 ERCC6Q03468 1493 aa12.66□□□□□ -0.38
PPME1-203ENST00000535205 FANCD2Q9BXW9 1451 aa12.66□□□□□ -0.38
PPME1-203ENST00000535205 SUPT5HO00267 1087 aaKnown RBP12.66□□□□□ -0.38
PPME1-203ENST00000535205 WDR62O43379 1518 aa12.65□□□□□ -0.38
PPME1-203ENST00000535205 PDS5BQ9NTI5 1447 aa12.64□□□□□ -0.39
PPME1-203ENST00000535205 URB2Q14146 1524 aaKnown RBP12.63□□□□□ -0.39
PPME1-203ENST00000535205 MRC2Q9UBG0 1479 aa12.61□□□□□ -0.39
PPME1-203ENST00000535205 CEP164Q9UPV0 1460 aa12.61□□□□□ -0.39
PPME1-203ENST00000535205 CUX2O14529 1486 aa12.59□□□□□ -0.39
PPME1-203ENST00000535205 DSG3P32926 999 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms