RNA–Protein interactions for RNA: ENST00000534486.1

KDM2A-215, Transcript of lysine demethylase 2A, humanhuman

TSL 3

Gene KDM2A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-215ENST00000534486 AEBP2Q6ZN18 517 aaPredicted RBP16.92■□□□□ 0.3
KDM2A-215ENST00000534486 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
KDM2A-215ENST00000534486 SENP3Q9H4L4 574 aaPredicted RBP14.65□□□□□ -0.06
KDM2A-215ENST00000534486 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
KDM2A-215ENST00000534486 FOXD1Q16676 465 aa13.48□□□□□ -0.25
KDM2A-215ENST00000534486 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.29
KDM2A-215ENST00000534486 NISCHQ9Y2I1 1504 aa13.05□□□□□ -0.32
KDM2A-215ENST00000534486 MSH5O43196 834 aa12.75□□□□□ -0.37
KDM2A-215ENST00000534486 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
KDM2A-215ENST00000534486 ADRA2BP18089 450 aa12.64□□□□□ -0.39
KDM2A-215ENST00000534486 PPP6R1Q9UPN7 881 aa12.62□□□□□ -0.39
KDM2A-215ENST00000534486 POTEDQ86YR6 584 aa12.13□□□□□ -0.47
KDM2A-215ENST00000534486 SCAF1Q9H7N4 1312 aaKnown RBP11.84□□□□□ -0.51
KDM2A-215ENST00000534486 DMRT2Q9Y5R5 561 aa11.57□□□□□ -0.56
KDM2A-215ENST00000534486 MAPK8IP2Q13387 824 aaPredicted RBP11.53□□□□□ -0.56
KDM2A-215ENST00000534486 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
KDM2A-215ENST00000534486 CNKSR2Q8WXI2 1034 aa11.34□□□□□ -0.59
KDM2A-215ENST00000534486 NCBP3Q53F19 620 aaKnown RBP11.28□□□□□ -0.6
KDM2A-215ENST00000534486 CCDC180Q9P1Z9 1646 aa11.21□□□□□ -0.61
KDM2A-215ENST00000534486 HOXD11P31277 338 aaPredicted RBP11.19□□□□□ -0.62
KDM2A-215ENST00000534486 RNF216Q9NWF9 866 aaPredicted RBP11.19□□□□□ -0.62
KDM2A-215ENST00000534486 DCAF8L1A6NGE4 600 aa11.14□□□□□ -0.63
KDM2A-215ENST00000534486 ZCCHC6Q5VYS8 1495 aaKnown RBP11.12□□□□□ -0.63
KDM2A-215ENST00000534486 NPM3O75607 178 aaKnown RBP10.92□□□□□ -0.66
KDM2A-215ENST00000534486 DNAJC5BQ9UF47 199 aa10.89□□□□□ -0.67
KDM2A-215ENST00000534486 DCAF1Q9Y4B6 1507 aa10.88□□□□□ -0.67
KDM2A-215ENST00000534486 ABCC9O60706 1549 aa10.86□□□□□ -0.67
KDM2A-215ENST00000534486 SHROOM4Q9ULL8 1493 aa10.85□□□□□ -0.67
KDM2A-215ENST00000534486 CACNB1Q02641 598 aaPredicted RBP10.81□□□□□ -0.68
KDM2A-215ENST00000534486 KCNA4P22459 653 aa10.78□□□□□ -0.68
KDM2A-215ENST00000534486 RNF39Q9H2S5 420 aa10.78□□□□□ -0.68
KDM2A-215ENST00000534486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.74□□□□□ -0.691e-6■■■■□ 26.6
KDM2A-215ENST00000534486 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
KDM2A-215ENST00000534486 SUPT5HO00267 1087 aaKnown RBP10.66□□□□□ -0.7
KDM2A-215ENST00000534486 MYO15BQ96JP2 1530 aa10.6□□□□□ -0.71
KDM2A-215ENST00000534486 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
KDM2A-215ENST00000534486 NACADO15069 1562 aa10.55□□□□□ -0.72
KDM2A-215ENST00000534486 HRCP23327 699 aa10.43□□□□□ -0.74
KDM2A-215ENST00000534486 APLP2Q06481 763 aa10.43□□□□□ -0.74
KDM2A-215ENST00000534486 U3KPZ7 1027 aaPredicted RBP10.41□□□□□ -0.74
KDM2A-215ENST00000534486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.4□□□□□ -0.74
KDM2A-215ENST00000534486 HNRNPUL2Q1KMD3 747 aaKnown RBP10.4□□□□□ -0.74
KDM2A-215ENST00000534486 DCAF8L2P0C7V8 631 aa10.34□□□□□ -0.75
KDM2A-215ENST00000534486 SLC4A2P04920 1241 aa10.33□□□□□ -0.76
KDM2A-215ENST00000534486 SLC4A1APQ9BWU0 796 aaKnown RBP10.32□□□□□ -0.76
KDM2A-215ENST00000534486 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
KDM2A-215ENST00000534486 CAPN15O75808 1086 aa10.29□□□□□ -0.76
KDM2A-215ENST00000534486 SAMD1Q6SPF0 538 aaPredicted RBP10.29□□□□□ -0.76
KDM2A-215ENST00000534486 SCRIBQ14160 1630 aa10.25□□□□□ -0.77
KDM2A-215ENST00000534486 UNC13AQ9UPW8 1703 aa10.23□□□□□ -0.77
KDM2A-215ENST00000534486 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
KDM2A-215ENST00000534486 ZNF219Q9P2Y4 722 aaPredicted RBP10.21□□□□□ -0.77
KDM2A-215ENST00000534486 PCGF6Q9BYE7 350 aa10.2□□□□□ -0.78
KDM2A-215ENST00000534486 SPINK5Q9NQ38 1064 aaPredicted RBP10.18□□□□□ -0.78
KDM2A-215ENST00000534486 FOXD4L1Q9NU39 408 aa10.15□□□□□ -0.78
KDM2A-215ENST00000534486 BICRAQ9NZM4 1560 aa10.14□□□□□ -0.79
KDM2A-215ENST00000534486 TRHP20396 242 aaPredicted RBP10.13□□□□□ -0.79
KDM2A-215ENST00000534486 TRIM26Q12899 539 aaPredicted RBP10.13□□□□□ -0.79
KDM2A-215ENST00000534486 LOC105371045A0A1W2PR82 267 aa10.12□□□□□ -0.79
KDM2A-215ENST00000534486 DSG3P32926 999 aa10.12□□□□□ -0.79
KDM2A-215ENST00000534486 EIF4G1Q04637 1599 aaKnown RBP10.11□□□□□ -0.79
KDM2A-215ENST00000534486 MROH2BQ7Z745 1585 aa10.09□□□□□ -0.79
KDM2A-215ENST00000534486 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
KDM2A-215ENST00000534486 PABPN1Q86U42 306 aaKnown RBP eCLIP10.08□□□□□ -0.8
KDM2A-215ENST00000534486 CECR2Q9BXF3 1484 aa10.06□□□□□ -0.8
KDM2A-215ENST00000534486 ZEB1P37275 1124 aaPredicted RBP10.02□□□□□ -0.81
KDM2A-215ENST00000534486 TRIM41Q8WV44 630 aa10.02□□□□□ -0.81
KDM2A-215ENST00000534486 PPARGC1BQ86YN6 1023 aaKnown RBP10.01□□□□□ -0.81
KDM2A-215ENST00000534486 WIZO95785 1651 aa9.99□□□□□ -0.81
KDM2A-215ENST00000534486 ABCB7O75027 752 aa9.98□□□□□ -0.81
KDM2A-215ENST00000534486 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
KDM2A-215ENST00000534486 SMARCA4P51532 1647 aa9.92□□□□□ -0.82
KDM2A-215ENST00000534486 WRNQ14191 1432 aaPredicted RBP eCLIP9.9□□□□□ -0.83
KDM2A-215ENST00000534486 SMARCA2P51531 1590 aa9.88□□□□□ -0.83
KDM2A-215ENST00000534486 ATXN8OSP0DMR3 200 aa9.88□□□□□ -0.83
KDM2A-215ENST00000534486 CC2D2AQ9P2K1 1620 aa9.88□□□□□ -0.83
KDM2A-215ENST00000534486 POLA2Q14181 598 aa9.87□□□□□ -0.83
KDM2A-215ENST00000534486 ZBTB12Q9Y330 459 aaPredicted RBP9.86□□□□□ -0.83
KDM2A-215ENST00000534486 EEA1Q15075 1411 aa9.85□□□□□ -0.83
KDM2A-215ENST00000534486 RBM42Q9BTD8 480 aaKnown RBP9.84□□□□□ -0.83
KDM2A-215ENST00000534486 CCDC88BA6NC98 1476 aa9.84□□□□□ -0.83
KDM2A-215ENST00000534486 PEG3Q9GZU2 1588 aa9.84□□□□□ -0.83
KDM2A-215ENST00000534486 ZBTB22O15209 634 aa9.83□□□□□ -0.84
KDM2A-215ENST00000534486 FAM9AQ8IZU1 332 aaPredicted RBP9.8□□□□□ -0.84
KDM2A-215ENST00000534486 TNIKQ9UKE5 1360 aa9.78□□□□□ -0.84
KDM2A-215ENST00000534486 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
KDM2A-215ENST00000534486 CEP162Q5TB80 1403 aa9.74□□□□□ -0.85
KDM2A-215ENST00000534486 ATF5Q9Y2D1 282 aaPredicted RBP9.74□□□□□ -0.85
KDM2A-215ENST00000534486 GOLGA3Q08378 1498 aa9.71□□□□□ -0.86
KDM2A-215ENST00000534486 SOGA1O94964 1423 aa9.7□□□□□ -0.86
KDM2A-215ENST00000534486 NCAPD3P42695 1498 aa9.7□□□□□ -0.86
KDM2A-215ENST00000534486 KIF21BO75037 1637 aa9.7□□□□□ -0.86
KDM2A-215ENST00000534486 HMGXB3Q12766 1538 aa9.68□□□□□ -0.86
KDM2A-215ENST00000534486 BAZ1BQ9UIG0 1483 aaKnown RBP9.66□□□□□ -0.86
KDM2A-215ENST00000534486 ATAD2BQ9ULI0 1458 aa9.66□□□□□ -0.86
KDM2A-215ENST00000534486 CEP164Q9UPV0 1460 aa9.66□□□□□ -0.86
KDM2A-215ENST00000534486 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.86
KDM2A-215ENST00000534486 CSRNP3Q8WYN3 585 aa9.65□□□□□ -0.86
KDM2A-215ENST00000534486 FBLN2P98095 1184 aa9.64□□□□□ -0.87
KDM2A-215ENST00000534486 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms