RNA–Protein interactions for RNA: ENST00000534381.1

SIRT3-216, Transcript of sirtuin 3, humanhuman

TSL 3

Gene SIRT3, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRT3-216ENST00000534381 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
SIRT3-216ENST00000534381 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
SIRT3-216ENST00000534381 PHF23Q9BUL5 403 aaPredicted RBP16.62■□□□□ 0.25
SIRT3-216ENST00000534381 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
SIRT3-216ENST00000534381 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
SIRT3-216ENST00000534381 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
SIRT3-216ENST00000534381 FOXD1Q16676 465 aa15.34■□□□□ 0.05
SIRT3-216ENST00000534381 ADRA2BP18089 450 aa14.72□□□□□ -0.05
SIRT3-216ENST00000534381 PPP6R1Q9UPN7 881 aa14.69□□□□□ -0.06
SIRT3-216ENST00000534381 PIAS4Q8N2W9 510 aaPredicted RBP14.54□□□□□ -0.08
SIRT3-216ENST00000534381 ABCC9O60706 1549 aa14.33□□□□□ -0.12
SIRT3-216ENST00000534381 MSH5O43196 834 aa14.26□□□□□ -0.13
SIRT3-216ENST00000534381 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.17
SIRT3-216ENST00000534381 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.21
SIRT3-216ENST00000534381 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
SIRT3-216ENST00000534381 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
SIRT3-216ENST00000534381 RB1CC1Q8TDY2 1594 aa13.44□□□□□ -0.26
SIRT3-216ENST00000534381 MAPK8IP2Q13387 824 aaPredicted RBP13.35□□□□□ -0.27
SIRT3-216ENST00000534381 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
SIRT3-216ENST00000534381 DCAF8L2P0C7V8 631 aa13.28□□□□□ -0.28
SIRT3-216ENST00000534381 NACADO15069 1562 aa13.28□□□□□ -0.28
SIRT3-216ENST00000534381 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
SIRT3-216ENST00000534381 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
SIRT3-216ENST00000534381 DMRT2Q9Y5R5 561 aa13.2□□□□□ -0.3
SIRT3-216ENST00000534381 KCNA4P22459 653 aa13.16□□□□□ -0.3
SIRT3-216ENST00000534381 UNC13AQ9UPW8 1703 aa13.14□□□□□ -0.31
SIRT3-216ENST00000534381 BICRAQ9NZM4 1560 aa13.11□□□□□ -0.31
SIRT3-216ENST00000534381 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
SIRT3-216ENST00000534381 MYO15BQ96JP2 1530 aa12.99□□□□□ -0.33
SIRT3-216ENST00000534381 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
SIRT3-216ENST00000534381 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
SIRT3-216ENST00000534381 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
SIRT3-216ENST00000534381 CC2D2AQ9P2K1 1620 aa12.89□□□□□ -0.35
SIRT3-216ENST00000534381 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
SIRT3-216ENST00000534381 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
SIRT3-216ENST00000534381 SHROOM4Q9ULL8 1493 aa12.81□□□□□ -0.36
SIRT3-216ENST00000534381 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
SIRT3-216ENST00000534381 EIF4G1Q04637 1599 aaKnown RBP12.8□□□□□ -0.36
SIRT3-216ENST00000534381 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
SIRT3-216ENST00000534381 DCAF1Q9Y4B6 1507 aa12.75□□□□□ -0.37
SIRT3-216ENST00000534381 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
SIRT3-216ENST00000534381 SLC4A1APQ9BWU0 796 aaKnown RBP12.58□□□□□ -0.4
SIRT3-216ENST00000534381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.39□□□□□ -0.43
SIRT3-216ENST00000534381 CUX2O14529 1486 aa12.37□□□□□ -0.43
SIRT3-216ENST00000534381 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
SIRT3-216ENST00000534381 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
SIRT3-216ENST00000534381 ATAD2BQ9ULI0 1458 aa12.26□□□□□ -0.45
SIRT3-216ENST00000534381 NESP48681 1621 aa12.26□□□□□ -0.45
SIRT3-216ENST00000534381 SLC4A2P04920 1241 aa12.23□□□□□ -0.45
SIRT3-216ENST00000534381 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
SIRT3-216ENST00000534381 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
SIRT3-216ENST00000534381 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
SIRT3-216ENST00000534381 SMARCA4P51532 1647 aa12.15□□□□□ -0.46
SIRT3-216ENST00000534381 RNF39Q9H2S5 420 aa12.15□□□□□ -0.46
SIRT3-216ENST00000534381 SMARCA2P51531 1590 aa12.14□□□□□ -0.47
SIRT3-216ENST00000534381 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
SIRT3-216ENST00000534381 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
SIRT3-216ENST00000534381 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
SIRT3-216ENST00000534381 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
SIRT3-216ENST00000534381 ZBTB22O15209 634 aa12.07□□□□□ -0.48
SIRT3-216ENST00000534381 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
SIRT3-216ENST00000534381 C1QBPQ07021 282 aaKnown RBP12.04□□□□□ -0.48
SIRT3-216ENST00000534381 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
SIRT3-216ENST00000534381 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
SIRT3-216ENST00000534381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
SIRT3-216ENST00000534381 HNRNPUL2Q1KMD3 747 aaKnown RBP12.02□□□□□ -0.49
SIRT3-216ENST00000534381 KIF21AQ7Z4S6 1674 aa12.02□□□□□ -0.49
SIRT3-216ENST00000534381 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
SIRT3-216ENST00000534381 MROH2BQ7Z745 1585 aa12□□□□□ -0.49
SIRT3-216ENST00000534381 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
SIRT3-216ENST00000534381 CSRNP3Q8WYN3 585 aa11.97□□□□□ -0.49
SIRT3-216ENST00000534381 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
SIRT3-216ENST00000534381 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
SIRT3-216ENST00000534381 APLP2Q06481 763 aa11.94□□□□□ -0.5
SIRT3-216ENST00000534381 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
SIRT3-216ENST00000534381 MRC2Q9UBG0 1479 aa11.91□□□□□ -0.5
SIRT3-216ENST00000534381 WDR62O43379 1518 aa11.89□□□□□ -0.51
SIRT3-216ENST00000534381 WIZO95785 1651 aa11.82□□□□□ -0.52
SIRT3-216ENST00000534381 CAPN15O75808 1086 aa11.82□□□□□ -0.52
SIRT3-216ENST00000534381 CEP164Q9UPV0 1460 aa11.82□□□□□ -0.52
SIRT3-216ENST00000534381 FANCD2Q9BXW9 1451 aa11.8□□□□□ -0.52
SIRT3-216ENST00000534381 OSCARQ8IYS5 282 aa11.79□□□□□ -0.52
SIRT3-216ENST00000534381 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
SIRT3-216ENST00000534381 ATXN8OSP0DMR3 200 aa11.74□□□□□ -0.53
SIRT3-216ENST00000534381 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
SIRT3-216ENST00000534381 CFTRP13569 1480 aa11.74□□□□□ -0.53
SIRT3-216ENST00000534381 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
SIRT3-216ENST00000534381 ZNF219Q9P2Y4 722 aaPredicted RBP11.73□□□□□ -0.53
SIRT3-216ENST00000534381 RIMBP3CA6NJZ7 1639 aa11.68□□□□□ -0.54
SIRT3-216ENST00000534381 RIMBP3BA6NNM3 1639 aa11.68□□□□□ -0.54
SIRT3-216ENST00000534381 RIMBP3Q9UFD9 1639 aa11.68□□□□□ -0.54
SIRT3-216ENST00000534381 RSF1Q96T23 1441 aaPredicted RBP11.66□□□□□ -0.54
SIRT3-216ENST00000534381 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.54
SIRT3-216ENST00000534381 ATF5Q9Y2D1 282 aaPredicted RBP11.65□□□□□ -0.54
SIRT3-216ENST00000534381 ARHGEF11O15085 1522 aa11.63□□□□□ -0.55
SIRT3-216ENST00000534381 TOP2AP11388 1531 aaKnown RBP11.63□□□□□ -0.55
SIRT3-216ENST00000534381 CYB5RLQ6IPT4 315 aa11.58□□□□□ -0.56
SIRT3-216ENST00000534381 IFT140Q96RY7 1462 aa11.57□□□□□ -0.56
SIRT3-216ENST00000534381 ABCB7O75027 752 aa11.56□□□□□ -0.56
SIRT3-216ENST00000534381 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms