RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 NISCHQ9Y2I1 1504 aa7.05□□□□□ -1.28
SOX6-217ENST00000533870 AEBP2Q6ZN18 517 aaPredicted RBP6.96□□□□□ -1.29
SOX6-217ENST00000533870 PELP1Q8IZL8 1130 aaKnown RBP6.71□□□□□ -1.33
SOX6-217ENST00000533870 MYT1Q01538 1121 aa6.66□□□□□ -1.34
SOX6-217ENST00000533870 ZEB1P37275 1124 aaPredicted RBP6.54□□□□□ -1.36
SOX6-217ENST00000533870 CHIC1Q5VXU3 224 aa6.53□□□□□ -1.36
SOX6-217ENST00000533870 HRCP23327 699 aa6.38□□□□□ -1.39
SOX6-217ENST00000533870 SUPT5HO00267 1087 aaKnown RBP6.34□□□□□ -1.39
SOX6-217ENST00000533870 CENPBP07199 599 aaPredicted RBP6.32□□□□□ -1.4
SOX6-217ENST00000533870 TTBK1Q5TCY1 1321 aaPredicted RBP6.23□□□□□ -1.41
SOX6-217ENST00000533870 TRIM26Q12899 539 aaPredicted RBP6.22□□□□□ -1.41
SOX6-217ENST00000533870 PHF23Q9BUL5 403 aaPredicted RBP6.2□□□□□ -1.42
SOX6-217ENST00000533870 PCGF6Q9BYE7 350 aa6.18□□□□□ -1.42
SOX6-217ENST00000533870 CLSPNQ9HAW4 1339 aa6.18□□□□□ -1.42
SOX6-217ENST00000533870 DCAF8L2P0C7V8 631 aa6.16□□□□□ -1.42
SOX6-217ENST00000533870 DCAF1Q9Y4B6 1507 aa6.12□□□□□ -1.43
SOX6-217ENST00000533870 SHROOM4Q9ULL8 1493 aa6.1□□□□□ -1.43
SOX6-217ENST00000533870 CCER1Q8TC90 406 aaPredicted RBP6.09□□□□□ -1.43
SOX6-217ENST00000533870 APLP2Q06481 763 aa6.07□□□□□ -1.44
SOX6-217ENST00000533870 TRIM41Q8WV44 630 aa6.07□□□□□ -1.44
SOX6-217ENST00000533870 MYT1LQ9UL68 1186 aa5.98□□□□□ -1.45
SOX6-217ENST00000533870 ZCCHC6Q5VYS8 1495 aaKnown RBP5.97□□□□□ -1.45
SOX6-217ENST00000533870 EHMT2Q96KQ7 1210 aa5.95□□□□□ -1.46
SOX6-217ENST00000533870 NEFLP07196 543 aa5.95□□□□□ -1.46
SOX6-217ENST00000533870 ACIN1Q9UKV3 1341 aaKnown RBP5.94□□□□□ -1.46
SOX6-217ENST00000533870 EEA1Q15075 1411 aa5.9□□□□□ -1.46
SOX6-217ENST00000533870 DIEXFQ68CQ4 756 aaKnown RBP5.88□□□□□ -1.47
SOX6-217ENST00000533870 FAM9AQ8IZU1 332 aaPredicted RBP5.86□□□□□ -1.47
SOX6-217ENST00000533870 ZNF316A6NFI3 1004 aaPredicted RBP5.85□□□□□ -1.47
SOX6-217ENST00000533870 ERICH6Q7L0X2 663 aa5.85□□□□□ -1.47
SOX6-217ENST00000533870 ADRA2BP18089 450 aa5.84□□□□□ -1.47
SOX6-217ENST00000533870 YTHDC1Q96MU7 727 aaKnown RBP5.81□□□□□ -1.48
SOX6-217ENST00000533870 UBTFP17480 764 aaKnown RBP5.8□□□□□ -1.48
SOX6-217ENST00000533870 TIMELESSQ9UNS1 1208 aa5.79□□□□□ -1.48
SOX6-217ENST00000533870 PPARGC1BQ86YN6 1023 aaKnown RBP5.79□□□□□ -1.48
SOX6-217ENST00000533870 GTF3C3Q9Y5Q9 886 aa5.78□□□□□ -1.48
SOX6-217ENST00000533870 LOC105371045A0A1W2PR82 267 aa5.78□□□□□ -1.48
SOX6-217ENST00000533870 CSRNP3Q8WYN3 585 aa5.78□□□□□ -1.48
SOX6-217ENST00000533870 MYO15BQ96JP2 1530 aa5.77□□□□□ -1.48
SOX6-217ENST00000533870 CCDC180Q9P1Z9 1646 aa5.76□□□□□ -1.49
SOX6-217ENST00000533870 ERICH6BQ5W0A0 696 aa5.74□□□□□ -1.49
SOX6-217ENST00000533870 TNIKQ9UKE5 1360 aa5.73□□□□□ -1.49
SOX6-217ENST00000533870 WRNQ14191 1432 aaPredicted RBP eCLIP5.7□□□□□ -1.5
SOX6-217ENST00000533870 SCAF1Q9H7N4 1312 aaKnown RBP5.7□□□□□ -1.5
SOX6-217ENST00000533870 RSF1Q96T23 1441 aaPredicted RBP5.69□□□□□ -1.5
SOX6-217ENST00000533870 RTL5Q5HYW3 569 aaPredicted RBP5.69□□□□□ -1.5
SOX6-217ENST00000533870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.69□□□□□ -1.5
SOX6-217ENST00000533870 NEUROD1Q13562 356 aa5.69□□□□□ -1.5
SOX6-217ENST00000533870 CDK11AQ9UQ88 783 aaPredicted RBP5.65□□□□□ -1.5
SOX6-217ENST00000533870 ANP32EQ9BTT0 268 aa5.65□□□□□ -1.51
SOX6-217ENST00000533870 ANP32CO43423 234 aa5.64□□□□□ -1.51
SOX6-217ENST00000533870 GOLGA3Q08378 1498 aa5.63□□□□□ -1.51
SOX6-217ENST00000533870 CCER2I3L3R5 266 aa5.62□□□□□ -1.51
SOX6-217ENST00000533870 HNRNPUL2Q1KMD3 747 aaKnown RBP5.62□□□□□ -1.51
SOX6-217ENST00000533870 CEP164Q9UPV0 1460 aa5.61□□□□□ -1.51
SOX6-217ENST00000533870 CLIP1P30622 1438 aa5.6□□□□□ -1.51
SOX6-217ENST00000533870 CEP162Q5TB80 1403 aa5.6□□□□□ -1.51
SOX6-217ENST00000533870 DAXXQ9UER7 740 aaPredicted RBP5.59□□□□□ -1.52
SOX6-217ENST00000533870 RB1CC1Q8TDY2 1594 aa5.58□□□□□ -1.52
SOX6-217ENST00000533870 ANP32AP39687 249 aaKnown RBP5.56□□□□□ -1.52
SOX6-217ENST00000533870 VPS8Q8N3P4 1428 aa5.56□□□□□ -1.52
SOX6-217ENST00000533870 KCNA4P22459 653 aa5.56□□□□□ -1.52
SOX6-217ENST00000533870 PPP6R1Q9UPN7 881 aa5.56□□□□□ -1.52
SOX6-217ENST00000533870 PLPPR3Q6T4P5 718 aa5.54□□□□□ -1.52
SOX6-217ENST00000533870 ABCC9O60706 1549 aa5.53□□□□□ -1.52
SOX6-217ENST00000533870 ARID4BQ4LE39 1312 aaPredicted RBP5.53□□□□□ -1.52
SOX6-217ENST00000533870 PPM1GO15355 546 aaPredicted RBP5.53□□□□□ -1.52
SOX6-217ENST00000533870 GLIPR1L2Q4G1C9 344 aa5.53□□□□□ -1.52
SOX6-217ENST00000533870 NACADO15069 1562 aa5.53□□□□□ -1.52
SOX6-217ENST00000533870 MIER1Q8N108 512 aa5.53□□□□□ -1.52
SOX6-217ENST00000533870 TONSLQ96HA7 1378 aa5.52□□□□□ -1.53
SOX6-217ENST00000533870 BAZ1AQ9NRL2 1556 aaPredicted RBP5.52□□□□□ -1.53
SOX6-217ENST00000533870 PPP4R2Q9NY27 417 aa5.5□□□□□ -1.53
SOX6-217ENST00000533870 BAZ1BQ9UIG0 1483 aaKnown RBP5.5□□□□□ -1.53
SOX6-217ENST00000533870 SUPT16HQ9Y5B9 1047 aaKnown RBP5.49□□□□□ -1.53
SOX6-217ENST00000533870 FANCIQ9NVI1 1328 aa5.49□□□□□ -1.53
SOX6-217ENST00000533870 EIF5BO60841 1220 aaKnown RBP5.49□□□□□ -1.53
SOX6-217ENST00000533870 USP35Q9P2H5 1018 aa5.49□□□□□ -1.53
SOX6-217ENST00000533870 FKBP8Q14318 412 aa5.48□□□□□ -1.53
SOX6-217ENST00000533870 FHAD1B1AJZ9 1412 aa5.48□□□□□ -1.53
SOX6-217ENST00000533870 DDRGK1Q96HY6 314 aa5.47□□□□□ -1.53
SOX6-217ENST00000533870 CCNB3Q8WWL7 1395 aa5.47□□□□□ -1.53
SOX6-217ENST00000533870 KIF27Q86VH2 1401 aa5.46□□□□□ -1.53
SOX6-217ENST00000533870 SLC24A1O60721 1099 aa5.45□□□□□ -1.54
SOX6-217ENST00000533870 ZBTB47Q9UFB7 747 aaPredicted RBP5.45□□□□□ -1.54
SOX6-217ENST00000533870 EIF4G2P78344 907 aaKnown RBP eCLIP5.45□□□□□ -1.54
SOX6-217ENST00000533870 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.44□□□□□ -1.54
SOX6-217ENST00000533870 TSHZ2Q9NRE2 1034 aa5.44□□□□□ -1.54
SOX6-217ENST00000533870 HNRNPUQ00839 825 aaKnown RBP eCLIP5.43□□□□□ -1.54
SOX6-217ENST00000533870 SCRIBQ14160 1630 aa5.43□□□□□ -1.54
SOX6-217ENST00000533870 NGEFQ8N5V2 710 aa5.42□□□□□ -1.54
SOX6-217ENST00000533870 BCL11AQ9H165 835 aa5.42□□□□□ -1.54
SOX6-217ENST00000533870 PDE3BQ13370 1112 aa5.42□□□□□ -1.54
SOX6-217ENST00000533870 FAM50AQ14320 339 aaKnown RBP5.41□□□□□ -1.54
SOX6-217ENST00000533870 ROCK2O75116 1388 aaKnown RBP5.41□□□□□ -1.54
SOX6-217ENST00000533870 CCDC136Q96JN2 1154 aa5.41□□□□□ -1.54
SOX6-217ENST00000533870 DHX57Q6P158 1386 aaKnown RBP5.41□□□□□ -1.54
SOX6-217ENST00000533870 PPP1R15AO75807 674 aaPredicted RBP5.41□□□□□ -1.54
SOX6-217ENST00000533870 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.4□□□□□ -1.54
SOX6-217ENST00000533870 SETD5Q9C0A6 1442 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms