RNA–Protein interactions for RNA: ENST00000532671.1

MRPL49-207, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 2

Gene MRPL49, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-207ENST00000532671 NISCHQ9Y2I1 1504 aa23.41■■□□□ 1.34
MRPL49-207ENST00000532671 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
MRPL49-207ENST00000532671 HRCP23327 699 aa20.86■□□□□ 0.93
MRPL49-207ENST00000532671 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
MRPL49-207ENST00000532671 PPARGC1BQ86YN6 1023 aaKnown RBP20.63■□□□□ 0.89
MRPL49-207ENST00000532671 PCGF6Q9BYE7 350 aa20.57■□□□□ 0.88
MRPL49-207ENST00000532671 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
MRPL49-207ENST00000532671 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
MRPL49-207ENST00000532671 LOC105371045A0A1W2PR82 267 aa20■□□□□ 0.79
MRPL49-207ENST00000532671 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
MRPL49-207ENST00000532671 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
MRPL49-207ENST00000532671 ZCCHC6Q5VYS8 1495 aaKnown RBP19.89■□□□□ 0.78
MRPL49-207ENST00000532671 PELP1Q8IZL8 1130 aaKnown RBP19.84■□□□□ 0.77
MRPL49-207ENST00000532671 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
MRPL49-207ENST00000532671 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
MRPL49-207ENST00000532671 DCAF8L2P0C7V8 631 aa19.71■□□□□ 0.75
MRPL49-207ENST00000532671 ZEB1P37275 1124 aaPredicted RBP19.51■□□□□ 0.71
MRPL49-207ENST00000532671 ABCC9O60706 1549 aa19.48■□□□□ 0.71
MRPL49-207ENST00000532671 EHMT2Q96KQ7 1210 aa19.3■□□□□ 0.68
MRPL49-207ENST00000532671 FAM9AQ8IZU1 332 aaPredicted RBP19.28■□□□□ 0.68
MRPL49-207ENST00000532671 NEUROD1Q13562 356 aa19.27■□□□□ 0.68
MRPL49-207ENST00000532671 ACIN1Q9UKV3 1341 aaKnown RBP19.25■□□□□ 0.67
MRPL49-207ENST00000532671 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
MRPL49-207ENST00000532671 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
MRPL49-207ENST00000532671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
MRPL49-207ENST00000532671 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
MRPL49-207ENST00000532671 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
MRPL49-207ENST00000532671 MYT1Q01538 1121 aa18.97■□□□□ 0.63
MRPL49-207ENST00000532671 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
MRPL49-207ENST00000532671 RSF1Q96T23 1441 aaPredicted RBP18.88■□□□□ 0.61
MRPL49-207ENST00000532671 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
MRPL49-207ENST00000532671 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
MRPL49-207ENST00000532671 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
MRPL49-207ENST00000532671 NACADO15069 1562 aa18.69■□□□□ 0.58
MRPL49-207ENST00000532671 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
MRPL49-207ENST00000532671 ZNF316A6NFI3 1004 aaPredicted RBP18.59■□□□□ 0.57
MRPL49-207ENST00000532671 MIER1Q8N108 512 aa18.55■□□□□ 0.56
MRPL49-207ENST00000532671 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
MRPL49-207ENST00000532671 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
MRPL49-207ENST00000532671 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
MRPL49-207ENST00000532671 MROH2BQ7Z745 1585 aa18.37■□□□□ 0.53
MRPL49-207ENST00000532671 CEP162Q5TB80 1403 aa18.34■□□□□ 0.53
MRPL49-207ENST00000532671 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.53
MRPL49-207ENST00000532671 WIZO95785 1651 aa18.33■□□□□ 0.52
MRPL49-207ENST00000532671 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
MRPL49-207ENST00000532671 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
MRPL49-207ENST00000532671 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
MRPL49-207ENST00000532671 SUPT16HQ9Y5B9 1047 aaKnown RBP18.21■□□□□ 0.51
MRPL49-207ENST00000532671 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
MRPL49-207ENST00000532671 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
MRPL49-207ENST00000532671 SOGA1O94964 1423 aa18.2■□□□□ 0.5
MRPL49-207ENST00000532671 UBTFP17480 764 aaKnown RBP18.19■□□□□ 0.5
MRPL49-207ENST00000532671 TNIKQ9UKE5 1360 aa18.16■□□□□ 0.5
MRPL49-207ENST00000532671 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
MRPL49-207ENST00000532671 TSHZ2Q9NRE2 1034 aa18.13■□□□□ 0.49
MRPL49-207ENST00000532671 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
MRPL49-207ENST00000532671 ANP32EQ9BTT0 268 aa18.08■□□□□ 0.48
MRPL49-207ENST00000532671 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
MRPL49-207ENST00000532671 BCL11AQ9H165 835 aa18.05■□□□□ 0.48
MRPL49-207ENST00000532671 BCANQ96GW7 911 aa17.95■□□□□ 0.46
MRPL49-207ENST00000532671 RANGAP1P46060 587 aaPredicted RBP17.94■□□□□ 0.46
MRPL49-207ENST00000532671 GOLGA3Q08378 1498 aa17.94■□□□□ 0.46
MRPL49-207ENST00000532671 CLSPNQ9HAW4 1339 aa17.93■□□□□ 0.46
MRPL49-207ENST00000532671 KCNH8Q96L42 1107 aa17.92■□□□□ 0.46
MRPL49-207ENST00000532671 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
MRPL49-207ENST00000532671 EEA1Q15075 1411 aa17.86■□□□□ 0.45
MRPL49-207ENST00000532671 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
MRPL49-207ENST00000532671 CLIP1P30622 1438 aa17.84■□□□□ 0.45
MRPL49-207ENST00000532671 APLP2Q06481 763 aa17.83■□□□□ 0.44
MRPL49-207ENST00000532671 DHX57Q6P158 1386 aaKnown RBP17.83■□□□□ 0.44
MRPL49-207ENST00000532671 VPS8Q8N3P4 1428 aa17.79■□□□□ 0.44
MRPL49-207ENST00000532671 FKBP8Q14318 412 aa17.77■□□□□ 0.44
MRPL49-207ENST00000532671 CEP164Q9UPV0 1460 aa17.73■□□□□ 0.43
MRPL49-207ENST00000532671 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
MRPL49-207ENST00000532671 RBM19Q9Y4C8 960 aaKnown RBP17.69■□□□□ 0.42
MRPL49-207ENST00000532671 ITGAEP38570 1179 aa17.68■□□□□ 0.42
MRPL49-207ENST00000532671 RAPGEF2Q9Y4G8 1499 aa17.67■□□□□ 0.42
MRPL49-207ENST00000532671 KIF21BO75037 1637 aa17.67■□□□□ 0.42
MRPL49-207ENST00000532671 KANK4Q5T7N3 995 aaPredicted RBP17.65■□□□□ 0.42
MRPL49-207ENST00000532671 SYNJ1O43426 1573 aa17.63■□□□□ 0.41
MRPL49-207ENST00000532671 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
MRPL49-207ENST00000532671 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
MRPL49-207ENST00000532671 MSH5O43196 834 aa17.58■□□□□ 0.41
MRPL49-207ENST00000532671 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
MRPL49-207ENST00000532671 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
MRPL49-207ENST00000532671 BAZ1BQ9UIG0 1483 aaKnown RBP17.53■□□□□ 0.4
MRPL49-207ENST00000532671 NEFLP07196 543 aa17.52■□□□□ 0.39
MRPL49-207ENST00000532671 HIRIP3Q9BW71 556 aaPredicted RBP17.51■□□□□ 0.39
MRPL49-207ENST00000532671 ARAP1Q96P48 1450 aa17.47■□□□□ 0.39
MRPL49-207ENST00000532671 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
MRPL49-207ENST00000532671 SIN3AQ96ST3 1273 aa17.44■□□□□ 0.38
MRPL49-207ENST00000532671 RRBP1Q9P2E9 1410 aaKnown RBP17.44■□□□□ 0.38
MRPL49-207ENST00000532671 MAPKBP1O60336 1514 aa17.42■□□□□ 0.38
MRPL49-207ENST00000532671 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
MRPL49-207ENST00000532671 RAB3GAP2Q9H2M9 1393 aa17.41■□□□□ 0.38
MRPL49-207ENST00000532671 PPP1R15AO75807 674 aaPredicted RBP17.41■□□□□ 0.38
MRPL49-207ENST00000532671 IRX6P78412 446 aaPredicted RBP17.41■□□□□ 0.38
MRPL49-207ENST00000532671 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
MRPL49-207ENST00000532671 CUX2O14529 1486 aa17.39■□□□□ 0.37
MRPL49-207ENST00000532671 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms