RNA–Protein interactions for RNA: ENST00000532581.5

GRAMD1B-208, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 2,615 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-208ENST00000532581 NISCHQ9Y2I1 1504 aa26.92■■□□□ 1.9
GRAMD1B-208ENST00000532581 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
GRAMD1B-208ENST00000532581 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
GRAMD1B-208ENST00000532581 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.24
GRAMD1B-208ENST00000532581 SUPT5HO00267 1087 aaKnown RBP22.49■■□□□ 1.19
GRAMD1B-208ENST00000532581 DCAF1Q9Y4B6 1507 aa22.18■■□□□ 1.14
GRAMD1B-208ENST00000532581 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
GRAMD1B-208ENST00000532581 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
GRAMD1B-208ENST00000532581 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
GRAMD1B-208ENST00000532581 HRCP23327 699 aa21.61■■□□□ 1.05
GRAMD1B-208ENST00000532581 ABCC9O60706 1549 aa21.58■■□□□ 1.05
GRAMD1B-208ENST00000532581 PCGF6Q9BYE7 350 aa21.42■■□□□ 1.02
GRAMD1B-208ENST00000532581 SCRIBQ14160 1630 aa21.36■■□□□ 1.01
GRAMD1B-208ENST00000532581 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
GRAMD1B-208ENST00000532581 LOC105371045A0A1W2PR82 267 aa21.28■■□□□ 1
GRAMD1B-208ENST00000532581 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
GRAMD1B-208ENST00000532581 NACADO15069 1562 aa21.11■□□□□ 0.97
GRAMD1B-208ENST00000532581 TRIM26Q12899 539 aaPredicted RBP21.08■□□□□ 0.96
GRAMD1B-208ENST00000532581 PPARGC1BQ86YN6 1023 aaKnown RBP21.01■□□□□ 0.95
GRAMD1B-208ENST00000532581 TRIM41Q8WV44 630 aa21■□□□□ 0.95
GRAMD1B-208ENST00000532581 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
GRAMD1B-208ENST00000532581 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
GRAMD1B-208ENST00000532581 WIZO95785 1651 aa20.78■□□□□ 0.92
GRAMD1B-208ENST00000532581 BAZ1AQ9NRL2 1556 aaPredicted RBP20.75■□□□□ 0.91
GRAMD1B-208ENST00000532581 ZEB1P37275 1124 aaPredicted RBP20.74■□□□□ 0.91
GRAMD1B-208ENST00000532581 FAM9AQ8IZU1 332 aaPredicted RBP20.74■□□□□ 0.91
GRAMD1B-208ENST00000532581 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
GRAMD1B-208ENST00000532581 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
GRAMD1B-208ENST00000532581 SMARCA4P51532 1647 aa20.48■□□□□ 0.87
GRAMD1B-208ENST00000532581 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
GRAMD1B-208ENST00000532581 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
GRAMD1B-208ENST00000532581 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
GRAMD1B-208ENST00000532581 CCDC88BA6NC98 1476 aa20.38■□□□□ 0.85
GRAMD1B-208ENST00000532581 ABCC8Q09428 1581 aa20.34■□□□□ 0.85
GRAMD1B-208ENST00000532581 WRNQ14191 1432 aaPredicted RBP eCLIP20.28■□□□□ 0.84
GRAMD1B-208ENST00000532581 EEA1Q15075 1411 aa20.23■□□□□ 0.83
GRAMD1B-208ENST00000532581 CEP162Q5TB80 1403 aa20.2■□□□□ 0.82
GRAMD1B-208ENST00000532581 TNIKQ9UKE5 1360 aa20.18■□□□□ 0.82
GRAMD1B-208ENST00000532581 SOGA1O94964 1423 aa20.17■□□□□ 0.82
GRAMD1B-208ENST00000532581 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
GRAMD1B-208ENST00000532581 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
GRAMD1B-208ENST00000532581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.11■□□□□ 0.81
GRAMD1B-208ENST00000532581 CCER1Q8TC90 406 aaPredicted RBP20.11■□□□□ 0.81
GRAMD1B-208ENST00000532581 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.8
GRAMD1B-208ENST00000532581 GOLGA3Q08378 1498 aa20.05■□□□□ 0.8
GRAMD1B-208ENST00000532581 RUSC2Q8N2Y8 1516 aa20.04■□□□□ 0.8
GRAMD1B-208ENST00000532581 UBTFP17480 764 aaKnown RBP19.96■□□□□ 0.79
GRAMD1B-208ENST00000532581 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
GRAMD1B-208ENST00000532581 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
GRAMD1B-208ENST00000532581 KIF21BO75037 1637 aa19.94■□□□□ 0.78
GRAMD1B-208ENST00000532581 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
GRAMD1B-208ENST00000532581 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
GRAMD1B-208ENST00000532581 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.78
GRAMD1B-208ENST00000532581 TTBK1Q5TCY1 1321 aaPredicted RBP19.89■□□□□ 0.77
GRAMD1B-208ENST00000532581 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
GRAMD1B-208ENST00000532581 BAZ1BQ9UIG0 1483 aaKnown RBP19.85■□□□□ 0.77
GRAMD1B-208ENST00000532581 DIEXFQ68CQ4 756 aaKnown RBP19.81■□□□□ 0.76
GRAMD1B-208ENST00000532581 CLIP1P30622 1438 aa19.79■□□□□ 0.76
GRAMD1B-208ENST00000532581 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
GRAMD1B-208ENST00000532581 VPS8Q8N3P4 1428 aa19.75■□□□□ 0.75
GRAMD1B-208ENST00000532581 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
GRAMD1B-208ENST00000532581 RAPGEF2Q9Y4G8 1499 aa19.7■□□□□ 0.74
GRAMD1B-208ENST00000532581 NEUROD1Q13562 356 aa19.67■□□□□ 0.74
GRAMD1B-208ENST00000532581 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
GRAMD1B-208ENST00000532581 CENPBP07199 599 aaPredicted RBP19.66■□□□□ 0.74
GRAMD1B-208ENST00000532581 ZNF316A6NFI3 1004 aaPredicted RBP19.65■□□□□ 0.74
GRAMD1B-208ENST00000532581 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
GRAMD1B-208ENST00000532581 APLP2Q06481 763 aa19.59■□□□□ 0.73
GRAMD1B-208ENST00000532581 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
GRAMD1B-208ENST00000532581 HMGXB3Q12766 1538 aa19.55■□□□□ 0.72
GRAMD1B-208ENST00000532581 PRXQ9BXM0 1461 aa19.55■□□□□ 0.72
GRAMD1B-208ENST00000532581 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
GRAMD1B-208ENST00000532581 GTF3C3Q9Y5Q9 886 aa19.49■□□□□ 0.71
GRAMD1B-208ENST00000532581 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
GRAMD1B-208ENST00000532581 CUX1P39880 1505 aa19.46■□□□□ 0.71
GRAMD1B-208ENST00000532581 RANGAP1P46060 587 aaPredicted RBP19.42■□□□□ 0.7
GRAMD1B-208ENST00000532581 KIF27Q86VH2 1401 aa19.41■□□□□ 0.7
GRAMD1B-208ENST00000532581 CLSPNQ9HAW4 1339 aa19.41■□□□□ 0.7
GRAMD1B-208ENST00000532581 CFTRP13569 1480 aa19.38■□□□□ 0.69
GRAMD1B-208ENST00000532581 MIER1Q8N108 512 aa19.34■□□□□ 0.69
GRAMD1B-208ENST00000532581 RRBP1Q9P2E9 1410 aaKnown RBP19.33■□□□□ 0.69
GRAMD1B-208ENST00000532581 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.68
GRAMD1B-208ENST00000532581 PRDM2Q13029 1718 aa19.3■□□□□ 0.68
GRAMD1B-208ENST00000532581 KANK4Q5T7N3 995 aaPredicted RBP19.29■□□□□ 0.68
GRAMD1B-208ENST00000532581 CUX2O14529 1486 aa19.27■□□□□ 0.68
GRAMD1B-208ENST00000532581 ARHGAP35Q9NRY4 1499 aa19.27■□□□□ 0.68
GRAMD1B-208ENST00000532581 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
GRAMD1B-208ENST00000532581 CCNB3Q8WWL7 1395 aa19.2■□□□□ 0.66
GRAMD1B-208ENST00000532581 MAP3K1Q13233 1512 aa19.17■□□□□ 0.66
GRAMD1B-208ENST00000532581 IGF1RP08069 1367 aa19.15■□□□□ 0.66
GRAMD1B-208ENST00000532581 TIAM1Q13009 1591 aa19.12■□□□□ 0.65
GRAMD1B-208ENST00000532581 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
GRAMD1B-208ENST00000532581 MYT1Q01538 1121 aa19.08■□□□□ 0.64
GRAMD1B-208ENST00000532581 FGD5Q6ZNL6 1462 aa19.08■□□□□ 0.64
GRAMD1B-208ENST00000532581 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
GRAMD1B-208ENST00000532581 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
GRAMD1B-208ENST00000532581 RAB3GAP2Q9H2M9 1393 aa19.02■□□□□ 0.64
GRAMD1B-208ENST00000532581 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
GRAMD1B-208ENST00000532581 CFAP43Q8NDM7 1665 aa19.01■□□□□ 0.63
GRAMD1B-208ENST00000532581 MAPKBP1O60336 1514 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms