RNA–Protein interactions for RNA: ENST00000531309.1

DKK3-210, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 707 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-210ENST00000531309 CHIC1Q5VXU3 224 aa18.73■□□□□ 0.59
DKK3-210ENST00000531309 AEBP2Q6ZN18 517 aaPredicted RBP18.65■□□□□ 0.58
DKK3-210ENST00000531309 PHF23Q9BUL5 403 aaPredicted RBP16.5■□□□□ 0.23
DKK3-210ENST00000531309 SENP3Q9H4L4 574 aaPredicted RBP15.8■□□□□ 0.12
DKK3-210ENST00000531309 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
DKK3-210ENST00000531309 FOXD1Q16676 465 aa14.57□□□□□ -0.08
DKK3-210ENST00000531309 ADRA2BP18089 450 aa14.41□□□□□ -0.1
DKK3-210ENST00000531309 PPP6R1Q9UPN7 881 aa14.39□□□□□ -0.11
DKK3-210ENST00000531309 NISCHQ9Y2I1 1504 aa14.02□□□□□ -0.16
DKK3-210ENST00000531309 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
DKK3-210ENST00000531309 KCNA4P22459 653 aa13.86□□□□□ -0.19
DKK3-210ENST00000531309 PPP4R3CPQ6ZMV5 832 aa13.66□□□□□ -0.22
DKK3-210ENST00000531309 ABCC9O60706 1549 aa13.54□□□□□ -0.24
DKK3-210ENST00000531309 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
DKK3-210ENST00000531309 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
DKK3-210ENST00000531309 SLC4A1APQ9BWU0 796 aaKnown RBP13.31□□□□□ -0.28
DKK3-210ENST00000531309 MSH5O43196 834 aa13.28□□□□□ -0.28
DKK3-210ENST00000531309 SCAF1Q9H7N4 1312 aaKnown RBP13.25□□□□□ -0.29
DKK3-210ENST00000531309 NPM3O75607 178 aaKnown RBP13.23□□□□□ -0.29
DKK3-210ENST00000531309 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
DKK3-210ENST00000531309 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
DKK3-210ENST00000531309 CSRNP3Q8WYN3 585 aa13.1□□□□□ -0.31
DKK3-210ENST00000531309 CCDC180Q9P1Z9 1646 aa13□□□□□ -0.33
DKK3-210ENST00000531309 MAPK8IP2Q13387 824 aaPredicted RBP12.93□□□□□ -0.34
DKK3-210ENST00000531309 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
DKK3-210ENST00000531309 ZBTB22O15209 634 aa12.74□□□□□ -0.37
DKK3-210ENST00000531309 DMRT2Q9Y5R5 561 aa12.68□□□□□ -0.38
DKK3-210ENST00000531309 RB1CC1Q8TDY2 1594 aa12.65□□□□□ -0.38
DKK3-210ENST00000531309 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
DKK3-210ENST00000531309 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
DKK3-210ENST00000531309 DNAJC5Q9H3Z4 198 aa12.6□□□□□ -0.39
DKK3-210ENST00000531309 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
DKK3-210ENST00000531309 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
DKK3-210ENST00000531309 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
DKK3-210ENST00000531309 NACADO15069 1562 aa12.36□□□□□ -0.43
DKK3-210ENST00000531309 CECR2Q9BXF3 1484 aa12.25□□□□□ -0.45
DKK3-210ENST00000531309 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
DKK3-210ENST00000531309 CC2D2AQ9P2K1 1620 aa12.23□□□□□ -0.45
DKK3-210ENST00000531309 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
DKK3-210ENST00000531309 DCAF8L2P0C7V8 631 aa12.19□□□□□ -0.46
DKK3-210ENST00000531309 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
DKK3-210ENST00000531309 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
DKK3-210ENST00000531309 EIF4G1Q04637 1599 aaKnown RBP12.02□□□□□ -0.49
DKK3-210ENST00000531309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
DKK3-210ENST00000531309 SHROOM4Q9ULL8 1493 aa12.01□□□□□ -0.49
DKK3-210ENST00000531309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.94□□□□□ -0.5
DKK3-210ENST00000531309 HNRNPUL2Q1KMD3 747 aaKnown RBP11.94□□□□□ -0.5
DKK3-210ENST00000531309 CUX2O14529 1486 aa11.94□□□□□ -0.5
DKK3-210ENST00000531309 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
DKK3-210ENST00000531309 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
DKK3-210ENST00000531309 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
DKK3-210ENST00000531309 U3KPZ7 1027 aaPredicted RBP11.87□□□□□ -0.51
DKK3-210ENST00000531309 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
DKK3-210ENST00000531309 FKBP8Q14318 412 aa11.81□□□□□ -0.52
DKK3-210ENST00000531309 ERCC6Q03468 1493 aa11.79□□□□□ -0.52
DKK3-210ENST00000531309 SCRIBQ14160 1630 aa11.78□□□□□ -0.52
DKK3-210ENST00000531309 APLP2Q06481 763 aa11.71□□□□□ -0.53
DKK3-210ENST00000531309 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
DKK3-210ENST00000531309 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
DKK3-210ENST00000531309 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
DKK3-210ENST00000531309 DCAF1Q9Y4B6 1507 aa11.52□□□□□ -0.57
DKK3-210ENST00000531309 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
DKK3-210ENST00000531309 THOC2Q8NI27 1593 aaKnown RBP11.49□□□□□ -0.57
DKK3-210ENST00000531309 ZCCHC6Q5VYS8 1495 aaKnown RBP11.47□□□□□ -0.57
DKK3-210ENST00000531309 NESP48681 1621 aa11.42□□□□□ -0.58
DKK3-210ENST00000531309 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
DKK3-210ENST00000531309 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
DKK3-210ENST00000531309 KIF21AQ7Z4S6 1674 aa11.4□□□□□ -0.59
DKK3-210ENST00000531309 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
DKK3-210ENST00000531309 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
DKK3-210ENST00000531309 BAZ1AQ9NRL2 1556 aaPredicted RBP11.37□□□□□ -0.59
DKK3-210ENST00000531309 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
DKK3-210ENST00000531309 FBLN2P98095 1184 aa11.35□□□□□ -0.59
DKK3-210ENST00000531309 MKRN4PQ13434 485 aaPredicted RBP11.35□□□□□ -0.59
DKK3-210ENST00000531309 NCAPD3P42695 1498 aa11.34□□□□□ -0.59
DKK3-210ENST00000531309 CAPN15O75808 1086 aa11.33□□□□□ -0.6
DKK3-210ENST00000531309 C1QBPQ07021 282 aaKnown RBP11.33□□□□□ -0.6
DKK3-210ENST00000531309 POLA2Q14181 598 aa11.32□□□□□ -0.6
DKK3-210ENST00000531309 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
DKK3-210ENST00000531309 LAMC3Q9Y6N6 1575 aa11.3□□□□□ -0.6
DKK3-210ENST00000531309 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
DKK3-210ENST00000531309 HMGXB3Q12766 1538 aa11.27□□□□□ -0.61
DKK3-210ENST00000531309 OSCARQ8IYS5 282 aa11.27□□□□□ -0.61
DKK3-210ENST00000531309 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.61
DKK3-210ENST00000531309 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.61
DKK3-210ENST00000531309 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.61
DKK3-210ENST00000531309 PROM2Q8N271 834 aa11.23□□□□□ -0.61
DKK3-210ENST00000531309 ATAD2BQ9ULI0 1458 aa11.23□□□□□ -0.61
DKK3-210ENST00000531309 PDS5BQ9NTI5 1447 aa11.21□□□□□ -0.61
DKK3-210ENST00000531309 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
DKK3-210ENST00000531309 MRC2Q9UBG0 1479 aa11.16□□□□□ -0.62
DKK3-210ENST00000531309 BAZ1BQ9UIG0 1483 aaKnown RBP11.16□□□□□ -0.62
DKK3-210ENST00000531309 WDR62O43379 1518 aa11.15□□□□□ -0.62
DKK3-210ENST00000531309 SMARCA4P51532 1647 aa11.15□□□□□ -0.62
DKK3-210ENST00000531309 ABCB7O75027 752 aa11.13□□□□□ -0.63
DKK3-210ENST00000531309 ARHGEF11O15085 1522 aa11.11□□□□□ -0.63
DKK3-210ENST00000531309 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
DKK3-210ENST00000531309 CYB5RLQ6IPT4 315 aa11.05□□□□□ -0.64
DKK3-210ENST00000531309 DSG3P32926 999 aa11.03□□□□□ -0.64
DKK3-210ENST00000531309 CEP164Q9UPV0 1460 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms