RNA–Protein interactions for RNA: ENST00000529670.5

LRP8-212, Transcript of LDL receptor related protein 8, humanhuman

TSL 5

Gene LRP8, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-212ENST00000529670 AEBP2Q6ZN18 517 aaPredicted RBP16.22■□□□□ 0.19
LRP8-212ENST00000529670 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
LRP8-212ENST00000529670 SENP3Q9H4L4 574 aaPredicted RBP13.91□□□□□ -0.18
LRP8-212ENST00000529670 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
LRP8-212ENST00000529670 FOXD1Q16676 465 aa12.85□□□□□ -0.35
LRP8-212ENST00000529670 PLPPR3Q6T4P5 718 aa12.72□□□□□ -0.37
LRP8-212ENST00000529670 NISCHQ9Y2I1 1504 aa12.47□□□□□ -0.41
LRP8-212ENST00000529670 ADRA2BP18089 450 aa12.18□□□□□ -0.46
LRP8-212ENST00000529670 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
LRP8-212ENST00000529670 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
LRP8-212ENST00000529670 MSH5O43196 834 aa12.03□□□□□ -0.48
LRP8-212ENST00000529670 ABCC9O60706 1549 aa11.3□□□□□ -0.6
LRP8-212ENST00000529670 CCDC180Q9P1Z9 1646 aa11.28□□□□□ -0.6
LRP8-212ENST00000529670 SCAF1Q9H7N4 1312 aaKnown RBP11.26□□□□□ -0.61
LRP8-212ENST00000529670 POTEDQ86YR6 584 aa11.22□□□□□ -0.61
LRP8-212ENST00000529670 PPP4R3CPQ6ZMV5 832 aa11.14□□□□□ -0.63
LRP8-212ENST00000529670 MAPK8IP2Q13387 824 aaPredicted RBP11.08□□□□□ -0.64
LRP8-212ENST00000529670 DMRT2Q9Y5R5 561 aa11.04□□□□□ -0.64
LRP8-212ENST00000529670 CNKSR2Q8WXI2 1034 aa10.91□□□□□ -0.66
LRP8-212ENST00000529670 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
LRP8-212ENST00000529670 RB1CC1Q8TDY2 1594 aa10.79□□□□□ -0.68
LRP8-212ENST00000529670 RNF216Q9NWF9 866 aaPredicted RBP10.74□□□□□ -0.69
LRP8-212ENST00000529670 HOXD11P31277 338 aaPredicted RBP10.73□□□□□ -0.69
LRP8-212ENST00000529670 NACADO15069 1562 aa10.7□□□□□ -0.7
LRP8-212ENST00000529670 DNAJC5BQ9UF47 199 aa10.66□□□□□ -0.7
LRP8-212ENST00000529670 KCNA4P22459 653 aa10.63□□□□□ -0.71
LRP8-212ENST00000529670 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
LRP8-212ENST00000529670 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
LRP8-212ENST00000529670 MYO15BQ96JP2 1530 aa10.56□□□□□ -0.72
LRP8-212ENST00000529670 DCAF8L2P0C7V8 631 aa10.52□□□□□ -0.73
LRP8-212ENST00000529670 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
LRP8-212ENST00000529670 UNC13AQ9UPW8 1703 aa10.45□□□□□ -0.74
LRP8-212ENST00000529670 BICRAQ9NZM4 1560 aa10.41□□□□□ -0.74
LRP8-212ENST00000529670 SHROOM4Q9ULL8 1493 aa10.41□□□□□ -0.74
LRP8-212ENST00000529670 DCAF1Q9Y4B6 1507 aa10.37□□□□□ -0.75
LRP8-212ENST00000529670 ZCCHC6Q5VYS8 1495 aaKnown RBP10.31□□□□□ -0.76
LRP8-212ENST00000529670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.26□□□□□ -0.773e-10■■■□□ 18
LRP8-212ENST00000529670 RNF39Q9H2S5 420 aa10.23□□□□□ -0.77
LRP8-212ENST00000529670 CECR2Q9BXF3 1484 aa10.23□□□□□ -0.77
LRP8-212ENST00000529670 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
LRP8-212ENST00000529670 EIF4G1Q04637 1599 aaKnown RBP10.19□□□□□ -0.78
LRP8-212ENST00000529670 SCRIBQ14160 1630 aa10.18□□□□□ -0.78
LRP8-212ENST00000529670 C1QBPQ07021 282 aaKnown RBP10.14□□□□□ -0.79
LRP8-212ENST00000529670 SLC4A1APQ9BWU0 796 aaKnown RBP10.14□□□□□ -0.79
LRP8-212ENST00000529670 CACNB1Q02641 598 aaPredicted RBP10.13□□□□□ -0.79
LRP8-212ENST00000529670 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
LRP8-212ENST00000529670 U3KPZ7 1027 aaPredicted RBP10.02□□□□□ -0.81
LRP8-212ENST00000529670 DNAJC5Q9H3Z4 198 aa9.96□□□□□ -0.82
LRP8-212ENST00000529670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.94□□□□□ -0.82
LRP8-212ENST00000529670 HNRNPUL2Q1KMD3 747 aaKnown RBP9.94□□□□□ -0.82
LRP8-212ENST00000529670 APLP2Q06481 763 aa9.91□□□□□ -0.82
LRP8-212ENST00000529670 FOXD4L1Q9NU39 408 aa9.9□□□□□ -0.82
LRP8-212ENST00000529670 MYCNP04198 464 aaPredicted RBP9.88□□□□□ -0.83
LRP8-212ENST00000529670 CUX2O14529 1486 aa9.87□□□□□ -0.83
LRP8-212ENST00000529670 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
LRP8-212ENST00000529670 SAMD1Q6SPF0 538 aaPredicted RBP9.86□□□□□ -0.83
LRP8-212ENST00000529670 ERCC6Q03468 1493 aa9.81□□□□□ -0.84
LRP8-212ENST00000529670 CAPN15O75808 1086 aa9.81□□□□□ -0.84
LRP8-212ENST00000529670 SMARCA2P51531 1590 aa9.8□□□□□ -0.84
LRP8-212ENST00000529670 ATAD2BQ9ULI0 1458 aa9.79□□□□□ -0.84
LRP8-212ENST00000529670 HMGXB3Q12766 1538 aa9.79□□□□□ -0.84
LRP8-212ENST00000529670 SPINK5Q9NQ38 1064 aaPredicted RBP9.78□□□□□ -0.84
LRP8-212ENST00000529670 ZNF219Q9P2Y4 722 aaPredicted RBP9.75□□□□□ -0.85
LRP8-212ENST00000529670 SMARCA4P51532 1647 aa9.74□□□□□ -0.85
LRP8-212ENST00000529670 ZBTB22O15209 634 aa9.74□□□□□ -0.85
LRP8-212ENST00000529670 BAZ1AQ9NRL2 1556 aaPredicted RBP9.71□□□□□ -0.85
LRP8-212ENST00000529670 TRHP20396 242 aaPredicted RBP9.7□□□□□ -0.86
LRP8-212ENST00000529670 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
LRP8-212ENST00000529670 PEG3Q9GZU2 1588 aa9.69□□□□□ -0.86
LRP8-212ENST00000529670 LAMC3Q9Y6N6 1575 aa9.67□□□□□ -0.86
LRP8-212ENST00000529670 DSG3P32926 999 aa9.66□□□□□ -0.86
LRP8-212ENST00000529670 NESP48681 1621 aa9.65□□□□□ -0.86
LRP8-212ENST00000529670 PDS5BQ9NTI5 1447 aa9.63□□□□□ -0.87
LRP8-212ENST00000529670 THOC2Q8NI27 1593 aaKnown RBP9.62□□□□□ -0.87
LRP8-212ENST00000529670 EHMT2Q96KQ7 1210 aa9.6□□□□□ -0.87
LRP8-212ENST00000529670 ATXN8OSP0DMR3 200 aa9.59□□□□□ -0.87
LRP8-212ENST00000529670 ABCB7O75027 752 aa9.57□□□□□ -0.88
LRP8-212ENST00000529670 MROH2BQ7Z745 1585 aa9.57□□□□□ -0.88
LRP8-212ENST00000529670 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
LRP8-212ENST00000529670 KIF21AQ7Z4S6 1674 aa9.55□□□□□ -0.88
LRP8-212ENST00000529670 CSRNP3Q8WYN3 585 aa9.54□□□□□ -0.88
LRP8-212ENST00000529670 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
LRP8-212ENST00000529670 MRC2Q9UBG0 1479 aa9.52□□□□□ -0.89
LRP8-212ENST00000529670 POLA2Q14181 598 aa9.49□□□□□ -0.89
LRP8-212ENST00000529670 WDR62O43379 1518 aa9.49□□□□□ -0.89
LRP8-212ENST00000529670 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.9
LRP8-212ENST00000529670 WIZO95785 1651 aa9.42□□□□□ -0.9
LRP8-212ENST00000529670 CFTRP13569 1480 aa9.42□□□□□ -0.9
LRP8-212ENST00000529670 FANCD2Q9BXW9 1451 aa9.42□□□□□ -0.9
LRP8-212ENST00000529670 ZBTB12Q9Y330 459 aaPredicted RBP9.42□□□□□ -0.9
LRP8-212ENST00000529670 TRIM41Q8WV44 630 aa9.41□□□□□ -0.9
LRP8-212ENST00000529670 OSCARQ8IYS5 282 aa9.39□□□□□ -0.91
LRP8-212ENST00000529670 TOP2AP11388 1531 aaKnown RBP9.36□□□□□ -0.91
LRP8-212ENST00000529670 RSF1Q96T23 1441 aaPredicted RBP9.36□□□□□ -0.91
LRP8-212ENST00000529670 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
LRP8-212ENST00000529670 PRDM2Q13029 1718 aa9.31□□□□□ -0.92
LRP8-212ENST00000529670 RBM42Q9BTD8 480 aaKnown RBP9.3□□□□□ -0.92
LRP8-212ENST00000529670 IFT140Q96RY7 1462 aa9.29□□□□□ -0.92
LRP8-212ENST00000529670 ABCC8Q09428 1581 aa9.29□□□□□ -0.92
LRP8-212ENST00000529670 FBLN2P98095 1184 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms