RNA–Protein interactions for RNA: ENST00000528651.1

SCUBE2-209, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5

Gene SCUBE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-209ENST00000528651 AEBP2Q6ZN18 517 aaPredicted RBP14.08□□□□□ -0.16
SCUBE2-209ENST00000528651 CHIC1Q5VXU3 224 aa13.18□□□□□ -0.3
SCUBE2-209ENST00000528651 POTEDQ86YR6 584 aa12.26□□□□□ -0.45
SCUBE2-209ENST00000528651 SENP3Q9H4L4 574 aaPredicted RBP12.2□□□□□ -0.46
SCUBE2-209ENST00000528651 PHF23Q9BUL5 403 aaPredicted RBP11.86□□□□□ -0.51
SCUBE2-209ENST00000528651 FOXD1Q16676 465 aa11.43□□□□□ -0.58
SCUBE2-209ENST00000528651 MSH5O43196 834 aa11.09□□□□□ -0.63
SCUBE2-209ENST00000528651 NISCHQ9Y2I1 1504 aa10.61□□□□□ -0.71
SCUBE2-209ENST00000528651 PIAS4Q8N2W9 510 aaPredicted RBP10.5□□□□□ -0.73
SCUBE2-209ENST00000528651 CACNB1Q02641 598 aaPredicted RBP10□□□□□ -0.81
SCUBE2-209ENST00000528651 PPP6R1Q9UPN7 881 aa9.98□□□□□ -0.81
SCUBE2-209ENST00000528651 ADRA2BP18089 450 aa9.9□□□□□ -0.82
SCUBE2-209ENST00000528651 PLPPR3Q6T4P5 718 aa9.64□□□□□ -0.87
SCUBE2-209ENST00000528651 DMRT2Q9Y5R5 561 aa9.52□□□□□ -0.89
SCUBE2-209ENST00000528651 POTEHQ6S545 545 aa9.44□□□□□ -0.9
SCUBE2-209ENST00000528651 MAPK8IP2Q13387 824 aaPredicted RBP9.35□□□□□ -0.91
SCUBE2-209ENST00000528651 RNF39Q9H2S5 420 aa9.35□□□□□ -0.91
SCUBE2-209ENST00000528651 C1QBPQ07021 282 aaKnown RBP9.18□□□□□ -0.94
SCUBE2-209ENST00000528651 DCAF8L1A6NGE4 600 aa9.14□□□□□ -0.95
SCUBE2-209ENST00000528651 SCAF1Q9H7N4 1312 aaKnown RBP9.11□□□□□ -0.95
SCUBE2-209ENST00000528651 CCDC180Q9P1Z9 1646 aa9.11□□□□□ -0.95
SCUBE2-209ENST00000528651 ZCCHC6Q5VYS8 1495 aaKnown RBP8.98□□□□□ -0.97
SCUBE2-209ENST00000528651 DCAF1Q9Y4B6 1507 aa8.85□□□□□ -0.99
SCUBE2-209ENST00000528651 HOXD11P31277 338 aaPredicted RBP8.84□□□□□ -0.99
SCUBE2-209ENST00000528651 SHROOM4Q9ULL8 1493 aa8.77□□□□□ -1.01
SCUBE2-209ENST00000528651 DNAJC5BQ9UF47 199 aa8.74□□□□□ -1.01
SCUBE2-209ENST00000528651 SUPT5HO00267 1087 aaKnown RBP8.65□□□□□ -1.02
SCUBE2-209ENST00000528651 MYO15BQ96JP2 1530 aa8.64□□□□□ -1.03
SCUBE2-209ENST00000528651 DCAF8L2P0C7V8 631 aa8.56□□□□□ -1.04
SCUBE2-209ENST00000528651 RNF216Q9NWF9 866 aaPredicted RBP8.54□□□□□ -1.04
SCUBE2-209ENST00000528651 ABCC9O60706 1549 aa8.46□□□□□ -1.05
SCUBE2-209ENST00000528651 DSG3P32926 999 aa8.45□□□□□ -1.06
SCUBE2-209ENST00000528651 SP7Q8TDD2 431 aaPredicted RBP8.44□□□□□ -1.06
SCUBE2-209ENST00000528651 NACADO15069 1562 aa8.42□□□□□ -1.06
SCUBE2-209ENST00000528651 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCUBE2-209ENST00000528651 CNKSR2Q8WXI2 1034 aa8.38□□□□□ -1.07
SCUBE2-209ENST00000528651 RSF1Q96T23 1441 aaPredicted RBP8.35□□□□□ -1.07
SCUBE2-209ENST00000528651 RB1CC1Q8TDY2 1594 aa8.32□□□□□ -1.08
SCUBE2-209ENST00000528651 PPP4R3CPQ6ZMV5 832 aa8.32□□□□□ -1.08
SCUBE2-209ENST00000528651 SCRIBQ14160 1630 aa8.32□□□□□ -1.08
SCUBE2-209ENST00000528651 CAPN15O75808 1086 aa8.29□□□□□ -1.08
SCUBE2-209ENST00000528651 HRCP23327 699 aa8.27□□□□□ -1.09
SCUBE2-209ENST00000528651 CHRDL2Q6WN34 429 aa8.27□□□□□ -1.09
SCUBE2-209ENST00000528651 SPINK5Q9NQ38 1064 aaPredicted RBP8.26□□□□□ -1.09
SCUBE2-209ENST00000528651 BAZ1AQ9NRL2 1556 aaPredicted RBP8.18□□□□□ -1.1
SCUBE2-209ENST00000528651 TRIM41Q8WV44 630 aa8.18□□□□□ -1.1
SCUBE2-209ENST00000528651 TRIM26Q12899 539 aaPredicted RBP8.17□□□□□ -1.1
SCUBE2-209ENST00000528651 PCGF6Q9BYE7 350 aa8.16□□□□□ -1.1
SCUBE2-209ENST00000528651 MROH2BQ7Z745 1585 aa8.15□□□□□ -1.1
SCUBE2-209ENST00000528651 CECR2Q9BXF3 1484 aa8.14□□□□□ -1.11
SCUBE2-209ENST00000528651 RBM42Q9BTD8 480 aaKnown RBP8.14□□□□□ -1.11
SCUBE2-209ENST00000528651 U3KPZ7 1027 aaPredicted RBP8.14□□□□□ -1.11
SCUBE2-209ENST00000528651 LOC105371045A0A1W2PR82 267 aa8.13□□□□□ -1.11
SCUBE2-209ENST00000528651 PLSCR2Q9NRY7 297 aa8.12□□□□□ -1.11
SCUBE2-209ENST00000528651 ZEB1P37275 1124 aaPredicted RBP8.11□□□□□ -1.11
SCUBE2-209ENST00000528651 TOP2AP11388 1531 aaKnown RBP8.08□□□□□ -1.12
SCUBE2-209ENST00000528651 WIZO95785 1651 aa8.08□□□□□ -1.12
SCUBE2-209ENST00000528651 SMARCA4P51532 1647 aa8.06□□□□□ -1.12
SCUBE2-209ENST00000528651 EIF4G1Q04637 1599 aaKnown RBP8.05□□□□□ -1.12
SCUBE2-209ENST00000528651 EEA1Q15075 1411 aa8.03□□□□□ -1.12
SCUBE2-209ENST00000528651 ABCB7O75027 752 aa8.01□□□□□ -1.13
SCUBE2-209ENST00000528651 PEG3Q9GZU2 1588 aa8□□□□□ -1.13
SCUBE2-209ENST00000528651 SMARCA2P51531 1590 aa7.98□□□□□ -1.13
SCUBE2-209ENST00000528651 CCDC88BA6NC98 1476 aa7.98□□□□□ -1.13
SCUBE2-209ENST00000528651 UNC13AQ9UPW8 1703 aa7.97□□□□□ -1.13
SCUBE2-209ENST00000528651 WRNQ14191 1432 aaPredicted RBP eCLIP7.95□□□□□ -1.14
SCUBE2-209ENST00000528651 HAX1O00165 279 aa7.95□□□□□ -1.14
SCUBE2-209ENST00000528651 TRHP20396 242 aaPredicted RBP7.94□□□□□ -1.14
SCUBE2-209ENST00000528651 ZNF219Q9P2Y4 722 aaPredicted RBP7.94□□□□□ -1.14
SCUBE2-209ENST00000528651 FAM9AQ8IZU1 332 aaPredicted RBP7.93□□□□□ -1.14
SCUBE2-209ENST00000528651 BICRAQ9NZM4 1560 aa7.93□□□□□ -1.14
SCUBE2-209ENST00000528651 TNIKQ9UKE5 1360 aa7.92□□□□□ -1.14
SCUBE2-209ENST00000528651 LHX8Q68G74 356 aa7.89□□□□□ -1.15
SCUBE2-209ENST00000528651 PPARGC1BQ86YN6 1023 aaKnown RBP7.87□□□□□ -1.15
SCUBE2-209ENST00000528651 PIP4P2Q8N4L2 257 aa7.87□□□□□ -1.15
SCUBE2-209ENST00000528651 CSRNP3Q8WYN3 585 aa7.87□□□□□ -1.15
SCUBE2-209ENST00000528651 GOLGA3Q08378 1498 aa7.86□□□□□ -1.15
SCUBE2-209ENST00000528651 ATAD2BQ9ULI0 1458 aa7.86□□□□□ -1.15
SCUBE2-209ENST00000528651 ABCC8Q09428 1581 aa7.85□□□□□ -1.15
SCUBE2-209ENST00000528651 APLP2Q06481 763 aa7.85□□□□□ -1.15
SCUBE2-209ENST00000528651 CEP162Q5TB80 1403 aa7.85□□□□□ -1.15
SCUBE2-209ENST00000528651 BAZ1BQ9UIG0 1483 aaKnown RBP7.83□□□□□ -1.16
SCUBE2-209ENST00000528651 CEP164Q9UPV0 1460 aa7.83□□□□□ -1.16
SCUBE2-209ENST00000528651 KIF21BO75037 1637 aa7.82□□□□□ -1.16
SCUBE2-209ENST00000528651 SOGA1O94964 1423 aa7.82□□□□□ -1.16
SCUBE2-209ENST00000528651 HMGXB3Q12766 1538 aa7.79□□□□□ -1.16
SCUBE2-209ENST00000528651 PABPN1Q86U42 306 aaKnown RBP eCLIP7.79□□□□□ -1.16
SCUBE2-209ENST00000528651 NCAPD3P42695 1498 aa7.77□□□□□ -1.17
SCUBE2-209ENST00000528651 UBTFP17480 764 aaKnown RBP7.77□□□□□ -1.17
SCUBE2-209ENST00000528651 EVX2Q03828 476 aa7.76□□□□□ -1.17
SCUBE2-209ENST00000528651 TOP2BQ02880 1626 aa7.75□□□□□ -1.17
SCUBE2-209ENST00000528651 NCBP3Q53F19 620 aaKnown RBP7.75□□□□□ -1.17
SCUBE2-209ENST00000528651 SYNJ1O43426 1573 aa7.75□□□□□ -1.17
SCUBE2-209ENST00000528651 CCER1Q8TC90 406 aaPredicted RBP7.74□□□□□ -1.17
SCUBE2-209ENST00000528651 ERICH3Q5RHP9 1530 aa7.73□□□□□ -1.17
SCUBE2-209ENST00000528651 AKT1S1Q96B36 256 aa7.73□□□□□ -1.17
SCUBE2-209ENST00000528651 EHMT2Q96KQ7 1210 aa7.73□□□□□ -1.17
SCUBE2-209ENST00000528651 BIVM-ERCC5R4GMW8 1640 aa7.73□□□□□ -1.17
SCUBE2-209ENST00000528651 RUSC2Q8N2Y8 1516 aa7.73□□□□□ -1.17
SCUBE2-209ENST00000528651 CLIP1P30622 1438 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms