RNA–Protein interactions for RNA: ENST00000527425.5

AP002004.1-208, humanhuman

TSL 3

Gene AP002004.1, Length 505 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002004.1-208ENST00000527425 CHIC1Q5VXU3 224 aa17.91■□□□□ 0.46
AP002004.1-208ENST00000527425 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
AP002004.1-208ENST00000527425 PHF23Q9BUL5 403 aaPredicted RBP15.73■□□□□ 0.11
AP002004.1-208ENST00000527425 SENP3Q9H4L4 574 aaPredicted RBP15.2■□□□□ 0.02
AP002004.1-208ENST00000527425 NISCHQ9Y2I1 1504 aa15.05■□□□□ -0
AP002004.1-208ENST00000527425 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
AP002004.1-208ENST00000527425 FOXD1Q16676 465 aa13.96□□□□□ -0.17
AP002004.1-208ENST00000527425 ADRA2BP18089 450 aa13.8□□□□□ -0.2
AP002004.1-208ENST00000527425 PPP6R1Q9UPN7 881 aa13.73□□□□□ -0.21
AP002004.1-208ENST00000527425 PIAS4Q8N2W9 510 aaPredicted RBP13.36□□□□□ -0.27
AP002004.1-208ENST00000527425 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
AP002004.1-208ENST00000527425 KCNA4P22459 653 aa13.22□□□□□ -0.29
AP002004.1-208ENST00000527425 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
AP002004.1-208ENST00000527425 ABCC9O60706 1549 aa13.01□□□□□ -0.33
AP002004.1-208ENST00000527425 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
AP002004.1-208ENST00000527425 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
AP002004.1-208ENST00000527425 MSH5O43196 834 aa12.82□□□□□ -0.36
AP002004.1-208ENST00000527425 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
AP002004.1-208ENST00000527425 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
AP002004.1-208ENST00000527425 DCAF8L2P0C7V8 631 aa12.69□□□□□ -0.38
AP002004.1-208ENST00000527425 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
AP002004.1-208ENST00000527425 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
AP002004.1-208ENST00000527425 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
AP002004.1-208ENST00000527425 RB1CC1Q8TDY2 1594 aa12.51□□□□□ -0.41
AP002004.1-208ENST00000527425 NACADO15069 1562 aa12.5□□□□□ -0.41
AP002004.1-208ENST00000527425 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
AP002004.1-208ENST00000527425 MYO15BQ96JP2 1530 aa12.4□□□□□ -0.42
AP002004.1-208ENST00000527425 DCAF1Q9Y4B6 1507 aa12.4□□□□□ -0.42
AP002004.1-208ENST00000527425 MAPK8IP2Q13387 824 aaPredicted RBP12.36□□□□□ -0.43
AP002004.1-208ENST00000527425 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
AP002004.1-208ENST00000527425 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
AP002004.1-208ENST00000527425 SCRIBQ14160 1630 aa12.22□□□□□ -0.45
AP002004.1-208ENST00000527425 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
AP002004.1-208ENST00000527425 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
AP002004.1-208ENST00000527425 DMRT2Q9Y5R5 561 aa12.15□□□□□ -0.46
AP002004.1-208ENST00000527425 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
AP002004.1-208ENST00000527425 ZBTB22O15209 634 aa12.11□□□□□ -0.47
AP002004.1-208ENST00000527425 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
AP002004.1-208ENST00000527425 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
AP002004.1-208ENST00000527425 SHROOM4Q9ULL8 1493 aa12.05□□□□□ -0.48
AP002004.1-208ENST00000527425 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
AP002004.1-208ENST00000527425 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
AP002004.1-208ENST00000527425 CC2D2AQ9P2K1 1620 aa11.75□□□□□ -0.53
AP002004.1-208ENST00000527425 CECR2Q9BXF3 1484 aa11.75□□□□□ -0.53
AP002004.1-208ENST00000527425 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
AP002004.1-208ENST00000527425 DCAF8L1A6NGE4 600 aa11.72□□□□□ -0.53
AP002004.1-208ENST00000527425 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
AP002004.1-208ENST00000527425 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
AP002004.1-208ENST00000527425 BAZ1AQ9NRL2 1556 aaPredicted RBP11.65□□□□□ -0.54
AP002004.1-208ENST00000527425 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
AP002004.1-208ENST00000527425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
AP002004.1-208ENST00000527425 ATAD2BQ9ULI0 1458 aa11.57□□□□□ -0.56
AP002004.1-208ENST00000527425 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
AP002004.1-208ENST00000527425 WIZO95785 1651 aa11.53□□□□□ -0.56
AP002004.1-208ENST00000527425 NCAPD3P42695 1498 aa11.53□□□□□ -0.56
AP002004.1-208ENST00000527425 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.57
AP002004.1-208ENST00000527425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
AP002004.1-208ENST00000527425 HNRNPUL2Q1KMD3 747 aaKnown RBP11.51□□□□□ -0.57
AP002004.1-208ENST00000527425 PEG3Q9GZU2 1588 aa11.5□□□□□ -0.57
AP002004.1-208ENST00000527425 BAZ1BQ9UIG0 1483 aaKnown RBP11.49□□□□□ -0.57
AP002004.1-208ENST00000527425 HMGXB3Q12766 1538 aa11.46□□□□□ -0.57
AP002004.1-208ENST00000527425 SAMD1Q6SPF0 538 aaPredicted RBP11.45□□□□□ -0.58
AP002004.1-208ENST00000527425 SUPT5HO00267 1087 aaKnown RBP11.4□□□□□ -0.58
AP002004.1-208ENST00000527425 U3KPZ7 1027 aaPredicted RBP11.36□□□□□ -0.59
AP002004.1-208ENST00000527425 TOP2AP11388 1531 aaKnown RBP11.35□□□□□ -0.59
AP002004.1-208ENST00000527425 APLP2Q06481 763 aa11.32□□□□□ -0.6
AP002004.1-208ENST00000527425 FKBP8Q14318 412 aa11.3□□□□□ -0.6
AP002004.1-208ENST00000527425 NESP48681 1621 aa11.28□□□□□ -0.6
AP002004.1-208ENST00000527425 ATF5Q9Y2D1 282 aaPredicted RBP11.26□□□□□ -0.61
AP002004.1-208ENST00000527425 CCDC88BA6NC98 1476 aa11.25□□□□□ -0.61
AP002004.1-208ENST00000527425 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
AP002004.1-208ENST00000527425 CADPSQ9ULU8 1353 aa11.22□□□□□ -0.61
AP002004.1-208ENST00000527425 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
AP002004.1-208ENST00000527425 KIF21AQ7Z4S6 1674 aa11.16□□□□□ -0.62
AP002004.1-208ENST00000527425 PDS5BQ9NTI5 1447 aa11.16□□□□□ -0.62
AP002004.1-208ENST00000527425 CFTRP13569 1480 aa11.15□□□□□ -0.62
AP002004.1-208ENST00000527425 ZNF219Q9P2Y4 722 aaPredicted RBP11.15□□□□□ -0.62
AP002004.1-208ENST00000527425 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
AP002004.1-208ENST00000527425 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
AP002004.1-208ENST00000527425 FANCD2Q9BXW9 1451 aa11.1□□□□□ -0.63
AP002004.1-208ENST00000527425 CEP164Q9UPV0 1460 aa11.07□□□□□ -0.64
AP002004.1-208ENST00000527425 THOC2Q8NI27 1593 aaKnown RBP11.04□□□□□ -0.64
AP002004.1-208ENST00000527425 MRC2Q9UBG0 1479 aa11.02□□□□□ -0.65
AP002004.1-208ENST00000527425 TRHP20396 242 aaPredicted RBP10.99□□□□□ -0.65
AP002004.1-208ENST00000527425 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
AP002004.1-208ENST00000527425 CUX2O14529 1486 aa10.98□□□□□ -0.65
AP002004.1-208ENST00000527425 URB2Q14146 1524 aaKnown RBP10.98□□□□□ -0.65
AP002004.1-208ENST00000527425 WDR62O43379 1518 aa10.97□□□□□ -0.65
AP002004.1-208ENST00000527425 CAPN15O75808 1086 aa10.95□□□□□ -0.66
AP002004.1-208ENST00000527425 FBLN2P98095 1184 aa10.95□□□□□ -0.66
AP002004.1-208ENST00000527425 RNF39Q9H2S5 420 aa10.95□□□□□ -0.66
AP002004.1-208ENST00000527425 TOPBP1Q92547 1522 aa10.93□□□□□ -0.66
AP002004.1-208ENST00000527425 ABCC8Q09428 1581 aa10.92□□□□□ -0.66
AP002004.1-208ENST00000527425 DNMBPQ6XZF7 1577 aa10.91□□□□□ -0.66
AP002004.1-208ENST00000527425 C1QBPQ07021 282 aaKnown RBP10.9□□□□□ -0.66
AP002004.1-208ENST00000527425 SPINK5Q9NQ38 1064 aaPredicted RBP10.9□□□□□ -0.66
AP002004.1-208ENST00000527425 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
AP002004.1-208ENST00000527425 CUX1P39880 1505 aa10.89□□□□□ -0.67
AP002004.1-208ENST00000527425 POLA2Q14181 598 aa10.88□□□□□ -0.67
AP002004.1-208ENST00000527425 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms