RNA–Protein interactions for RNA: ENST00000526483.1

SLFN13-203, Transcript of schlafen family member 13, humanhuman

TSL 3

Gene SLFN13, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFN13-203ENST00000526483 AEBP2Q6ZN18 517 aaPredicted RBP27.53■■■□□ 2
SLFN13-203ENST00000526483 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
SLFN13-203ENST00000526483 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
SLFN13-203ENST00000526483 PHF23Q9BUL5 403 aaPredicted RBP23.25■■□□□ 1.31
SLFN13-203ENST00000526483 FOXD1Q16676 465 aa22■■□□□ 1.11
SLFN13-203ENST00000526483 MSH5O43196 834 aa20.77■□□□□ 0.92
SLFN13-203ENST00000526483 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
SLFN13-203ENST00000526483 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
SLFN13-203ENST00000526483 PIAS4Q8N2W9 510 aaPredicted RBP20.51■□□□□ 0.87
SLFN13-203ENST00000526483 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.85
SLFN13-203ENST00000526483 ADRA2BP18089 450 aa20.26■□□□□ 0.83
SLFN13-203ENST00000526483 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
SLFN13-203ENST00000526483 MAPK8IP2Q13387 824 aaPredicted RBP18.68■□□□□ 0.58
SLFN13-203ENST00000526483 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
SLFN13-203ENST00000526483 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
SLFN13-203ENST00000526483 ABCC9O60706 1549 aa18.35■□□□□ 0.53
SLFN13-203ENST00000526483 PPP4R3CPQ6ZMV5 832 aa18.03■□□□□ 0.48
SLFN13-203ENST00000526483 CACNB1Q02641 598 aaPredicted RBP17.96■□□□□ 0.47
SLFN13-203ENST00000526483 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
SLFN13-203ENST00000526483 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
SLFN13-203ENST00000526483 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
SLFN13-203ENST00000526483 CNKSR2Q8WXI2 1034 aa17.79■□□□□ 0.44
SLFN13-203ENST00000526483 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
SLFN13-203ENST00000526483 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
SLFN13-203ENST00000526483 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
SLFN13-203ENST00000526483 C1QBPQ07021 282 aaKnown RBP17.42■□□□□ 0.38
SLFN13-203ENST00000526483 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
SLFN13-203ENST00000526483 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
SLFN13-203ENST00000526483 RB1CC1Q8TDY2 1594 aa17.14■□□□□ 0.33
SLFN13-203ENST00000526483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
SLFN13-203ENST00000526483 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
SLFN13-203ENST00000526483 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.31
SLFN13-203ENST00000526483 NACADO15069 1562 aa16.81■□□□□ 0.28
SLFN13-203ENST00000526483 CECR2Q9BXF3 1484 aa16.65■□□□□ 0.26
SLFN13-203ENST00000526483 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
SLFN13-203ENST00000526483 BICRAQ9NZM4 1560 aa16.59■□□□□ 0.25
SLFN13-203ENST00000526483 UNC13AQ9UPW8 1703 aa16.57■□□□□ 0.24
SLFN13-203ENST00000526483 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
SLFN13-203ENST00000526483 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.23
SLFN13-203ENST00000526483 CAPN15O75808 1086 aa16.47■□□□□ 0.23
SLFN13-203ENST00000526483 DSG3P32926 999 aa16.44■□□□□ 0.22
SLFN13-203ENST00000526483 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
SLFN13-203ENST00000526483 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
SLFN13-203ENST00000526483 KCNA4P22459 653 aa16.38■□□□□ 0.21
SLFN13-203ENST00000526483 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
SLFN13-203ENST00000526483 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
SLFN13-203ENST00000526483 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
SLFN13-203ENST00000526483 APLP2Q06481 763 aa16.25■□□□□ 0.19
SLFN13-203ENST00000526483 CUX2O14529 1486 aa16.22■□□□□ 0.19
SLFN13-203ENST00000526483 POTEHQ6S545 545 aa16.16■□□□□ 0.18
SLFN13-203ENST00000526483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
SLFN13-203ENST00000526483 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
SLFN13-203ENST00000526483 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
SLFN13-203ENST00000526483 TRHP20396 242 aaPredicted RBP16.13■□□□□ 0.17
SLFN13-203ENST00000526483 TRIM41Q8WV44 630 aa16.03■□□□□ 0.16
SLFN13-203ENST00000526483 ABCB7O75027 752 aa16.02■□□□□ 0.16
SLFN13-203ENST00000526483 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
SLFN13-203ENST00000526483 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
SLFN13-203ENST00000526483 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
SLFN13-203ENST00000526483 DCAF1Q9Y4B6 1507 aa15.81■□□□□ 0.12
SLFN13-203ENST00000526483 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
SLFN13-203ENST00000526483 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
SLFN13-203ENST00000526483 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.1
SLFN13-203ENST00000526483 POLA2Q14181 598 aa15.65■□□□□ 0.1
SLFN13-203ENST00000526483 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
SLFN13-203ENST00000526483 THOC2Q8NI27 1593 aaKnown RBP15.51■□□□□ 0.07
SLFN13-203ENST00000526483 NESP48681 1621 aa15.5■□□□□ 0.07
SLFN13-203ENST00000526483 CHRDL2Q6WN34 429 aa15.46■□□□□ 0.07
SLFN13-203ENST00000526483 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
SLFN13-203ENST00000526483 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
SLFN13-203ENST00000526483 SMARCA2P51531 1590 aa15.37■□□□□ 0.05
SLFN13-203ENST00000526483 ZBTB12Q9Y330 459 aaPredicted RBP15.37■□□□□ 0.05
SLFN13-203ENST00000526483 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
SLFN13-203ENST00000526483 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
SLFN13-203ENST00000526483 HMGXB3Q12766 1538 aa15.34■□□□□ 0.05
SLFN13-203ENST00000526483 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
SLFN13-203ENST00000526483 AKT1S1Q96B36 256 aa15.32■□□□□ 0.04
SLFN13-203ENST00000526483 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
SLFN13-203ENST00000526483 PDS5BQ9NTI5 1447 aa15.31■□□□□ 0.04
SLFN13-203ENST00000526483 BAZ1AQ9NRL2 1556 aaPredicted RBP15.29■□□□□ 0.04
SLFN13-203ENST00000526483 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
SLFN13-203ENST00000526483 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
SLFN13-203ENST00000526483 BAZ1BQ9UIG0 1483 aaKnown RBP15.19■□□□□ 0.02
SLFN13-203ENST00000526483 WDR62O43379 1518 aa15.16■□□□□ 0.02
SLFN13-203ENST00000526483 RIMBP3CA6NJZ7 1639 aa15.15■□□□□ 0.02
SLFN13-203ENST00000526483 RIMBP3BA6NNM3 1639 aa15.15■□□□□ 0.02
SLFN13-203ENST00000526483 RIMBP3Q9UFD9 1639 aa15.15■□□□□ 0.02
SLFN13-203ENST00000526483 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
SLFN13-203ENST00000526483 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
SLFN13-203ENST00000526483 ARHGEF11O15085 1522 aa15.06■□□□□ 0
SLFN13-203ENST00000526483 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
SLFN13-203ENST00000526483 ATXN8OSP0DMR3 200 aa15.03■□□□□ -0
SLFN13-203ENST00000526483 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
SLFN13-203ENST00000526483 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
SLFN13-203ENST00000526483 ZBTB22O15209 634 aa15.01□□□□□ -0.01
SLFN13-203ENST00000526483 CYB5RLQ6IPT4 315 aa15.01□□□□□ -0.01
SLFN13-203ENST00000526483 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
SLFN13-203ENST00000526483 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.01
SLFN13-203ENST00000526483 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
SLFN13-203ENST00000526483 FXR2P51116 673 aaKnown RBP eCLIP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms