RNA–Protein interactions for RNA: ENST00000526461.1

GTF2H1-207, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 2

Gene GTF2H1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-207ENST00000526461 AEBP2Q6ZN18 517 aaPredicted RBP37.36■■■■□ 3.57
GTF2H1-207ENST00000526461 CHIC1Q5VXU3 224 aa36.01■■■■□ 3.36
GTF2H1-207ENST00000526461 SENP3Q9H4L4 574 aaPredicted RBP31.7■■■□□ 2.67
GTF2H1-207ENST00000526461 PHF23Q9BUL5 403 aaPredicted RBP31.68■■■□□ 2.66
GTF2H1-207ENST00000526461 FOXD1Q16676 465 aa29.53■■■□□ 2.32
GTF2H1-207ENST00000526461 PLPPR3Q6T4P5 718 aa29.04■■■□□ 2.24
GTF2H1-207ENST00000526461 NISCHQ9Y2I1 1504 aa28.27■■■□□ 2.12
GTF2H1-207ENST00000526461 PPP6R1Q9UPN7 881 aa28.12■■■□□ 2.09
GTF2H1-207ENST00000526461 ADRA2BP18089 450 aa28.08■■■□□ 2.09
GTF2H1-207ENST00000526461 PIAS4Q8N2W9 510 aaPredicted RBP27.74■■■□□ 2.03
GTF2H1-207ENST00000526461 MSH5O43196 834 aa27.32■■□□□ 1.96
GTF2H1-207ENST00000526461 POTEDQ86YR6 584 aa25.7■■□□□ 1.7
GTF2H1-207ENST00000526461 MAPK8IP2Q13387 824 aaPredicted RBP25.62■■□□□ 1.69
GTF2H1-207ENST00000526461 PPP4R3CPQ6ZMV5 832 aa25.58■■□□□ 1.69
GTF2H1-207ENST00000526461 SCAF1Q9H7N4 1312 aaKnown RBP25.58■■□□□ 1.69
GTF2H1-207ENST00000526461 DMRT2Q9Y5R5 561 aa25.24■■□□□ 1.63
GTF2H1-207ENST00000526461 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
GTF2H1-207ENST00000526461 CNKSR2Q8WXI2 1034 aa24.92■■□□□ 1.58
GTF2H1-207ENST00000526461 NCBP3Q53F19 620 aaKnown RBP24.73■■□□□ 1.55
GTF2H1-207ENST00000526461 ABCC9O60706 1549 aa24.56■■□□□ 1.52
GTF2H1-207ENST00000526461 KCNA4P22459 653 aa24.54■■□□□ 1.52
GTF2H1-207ENST00000526461 HOXD11P31277 338 aaPredicted RBP24.54■■□□□ 1.52
GTF2H1-207ENST00000526461 RNF216Q9NWF9 866 aaPredicted RBP24.52■■□□□ 1.52
GTF2H1-207ENST00000526461 NPM3O75607 178 aaKnown RBP24.43■■□□□ 1.5
GTF2H1-207ENST00000526461 DCAF8L1A6NGE4 600 aa24.27■■□□□ 1.48
GTF2H1-207ENST00000526461 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.37
GTF2H1-207ENST00000526461 NACADO15069 1562 aa23.64■■□□□ 1.37
GTF2H1-207ENST00000526461 RB1CC1Q8TDY2 1594 aa23.64■■□□□ 1.37
GTF2H1-207ENST00000526461 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
GTF2H1-207ENST00000526461 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
GTF2H1-207ENST00000526461 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
GTF2H1-207ENST00000526461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.44■■□□□ 1.34
GTF2H1-207ENST00000526461 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
GTF2H1-207ENST00000526461 RNF39Q9H2S5 420 aa23.4■■□□□ 1.34
GTF2H1-207ENST00000526461 SLC4A1APQ9BWU0 796 aaKnown RBP23.26■■□□□ 1.31
GTF2H1-207ENST00000526461 SLC4A2P04920 1241 aa23.18■■□□□ 1.3
GTF2H1-207ENST00000526461 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.3
GTF2H1-207ENST00000526461 CACNB1Q02641 598 aaPredicted RBP23.14■■□□□ 1.29
GTF2H1-207ENST00000526461 C1QBPQ07021 282 aaKnown RBP23.07■■□□□ 1.28
GTF2H1-207ENST00000526461 U3KPZ7 1027 aaPredicted RBP23.01■■□□□ 1.27
GTF2H1-207ENST00000526461 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
GTF2H1-207ENST00000526461 PABPN1Q86U42 306 aaKnown RBP eCLIP22.93■■□□□ 1.26
GTF2H1-207ENST00000526461 SCRIBQ14160 1630 aa22.88■■□□□ 1.25
GTF2H1-207ENST00000526461 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
GTF2H1-207ENST00000526461 FOXD4L1Q9NU39 408 aa22.64■■□□□ 1.21
GTF2H1-207ENST00000526461 ZBTB22O15209 634 aa22.58■■□□□ 1.21
GTF2H1-207ENST00000526461 MYCNP04198 464 aaPredicted RBP22.54■■□□□ 1.2
GTF2H1-207ENST00000526461 SPINK5Q9NQ38 1064 aaPredicted RBP22.53■■□□□ 1.2
GTF2H1-207ENST00000526461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
GTF2H1-207ENST00000526461 HNRNPUL2Q1KMD3 747 aaKnown RBP22.49■■□□□ 1.19
GTF2H1-207ENST00000526461 CAPN15O75808 1086 aa22.45■■□□□ 1.18
GTF2H1-207ENST00000526461 SAMD1Q6SPF0 538 aaPredicted RBP22.41■■□□□ 1.18
GTF2H1-207ENST00000526461 EIF4G1Q04637 1599 aaKnown RBP22.34■■□□□ 1.17
GTF2H1-207ENST00000526461 APLP2Q06481 763 aa22.33■■□□□ 1.17
GTF2H1-207ENST00000526461 TRHP20396 242 aaPredicted RBP22.26■■□□□ 1.15
GTF2H1-207ENST00000526461 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
GTF2H1-207ENST00000526461 EHMT2Q96KQ7 1210 aa22.18■■□□□ 1.14
GTF2H1-207ENST00000526461 DSG3P32926 999 aa22.14■■□□□ 1.13
GTF2H1-207ENST00000526461 ZNF219Q9P2Y4 722 aaPredicted RBP22.14■■□□□ 1.13
GTF2H1-207ENST00000526461 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
GTF2H1-207ENST00000526461 CSRNP3Q8WYN3 585 aa22.08■■□□□ 1.13
GTF2H1-207ENST00000526461 ATF5Q9Y2D1 282 aaPredicted RBP22.05■■□□□ 1.12
GTF2H1-207ENST00000526461 ABCB7O75027 752 aa22.02■■□□□ 1.12
GTF2H1-207ENST00000526461 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
GTF2H1-207ENST00000526461 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
GTF2H1-207ENST00000526461 ATXN8OSP0DMR3 200 aa21.84■■□□□ 1.09
GTF2H1-207ENST00000526461 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
GTF2H1-207ENST00000526461 ATAD2BQ9ULI0 1458 aa21.82■■□□□ 1.08
GTF2H1-207ENST00000526461 POLA2Q14181 598 aa21.78■■□□□ 1.08
GTF2H1-207ENST00000526461 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
GTF2H1-207ENST00000526461 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
GTF2H1-207ENST00000526461 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
GTF2H1-207ENST00000526461 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
GTF2H1-207ENST00000526461 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
GTF2H1-207ENST00000526461 WIZO95785 1651 aa21.53■■□□□ 1.04
GTF2H1-207ENST00000526461 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
GTF2H1-207ENST00000526461 TOP2AP11388 1531 aaKnown RBP21.3■■□□□ 1
GTF2H1-207ENST00000526461 ZBTB12Q9Y330 459 aaPredicted RBP21.29■■□□□ 1
GTF2H1-207ENST00000526461 NESP48681 1621 aa21.27■■□□□ 1
GTF2H1-207ENST00000526461 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
GTF2H1-207ENST00000526461 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
GTF2H1-207ENST00000526461 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
GTF2H1-207ENST00000526461 FBLN2P98095 1184 aa21.08■□□□□ 0.97
GTF2H1-207ENST00000526461 PDS5BQ9NTI5 1447 aa21.06■□□□□ 0.96
GTF2H1-207ENST00000526461 OSCARQ8IYS5 282 aa21.06■□□□□ 0.96
GTF2H1-207ENST00000526461 CCDC88BA6NC98 1476 aa21.06■□□□□ 0.96
GTF2H1-207ENST00000526461 MKRN4PQ13434 485 aaPredicted RBP21.05■□□□□ 0.96
GTF2H1-207ENST00000526461 RBM42Q9BTD8 480 aaKnown RBP21.05■□□□□ 0.96
GTF2H1-207ENST00000526461 CFTRP13569 1480 aa21.05■□□□□ 0.96
GTF2H1-207ENST00000526461 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.96
GTF2H1-207ENST00000526461 THOC2Q8NI27 1593 aaKnown RBP20.99■□□□□ 0.95
GTF2H1-207ENST00000526461 CUX2O14529 1486 aa20.99■□□□□ 0.95
GTF2H1-207ENST00000526461 FANCD2Q9BXW9 1451 aa20.9■□□□□ 0.94
GTF2H1-207ENST00000526461 PRDM2Q13029 1718 aa20.89■□□□□ 0.93
GTF2H1-207ENST00000526461 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
GTF2H1-207ENST00000526461 MRC2Q9UBG0 1479 aa20.86■□□□□ 0.93
GTF2H1-207ENST00000526461 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
GTF2H1-207ENST00000526461 WDR62O43379 1518 aa20.83■□□□□ 0.92
GTF2H1-207ENST00000526461 AKT1S1Q96B36 256 aa20.73■□□□□ 0.91
GTF2H1-207ENST00000526461 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms