RNA–Protein interactions for RNA: ENST00000524482.5

MRPL49-202, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 2

Gene MRPL49, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-202ENST00000524482 NISCHQ9Y2I1 1504 aa27.88■■■□□ 2.05
MRPL49-202ENST00000524482 SHROOM4Q9ULL8 1493 aa23.83■■□□□ 1.41
MRPL49-202ENST00000524482 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
MRPL49-202ENST00000524482 ZCCHC6Q5VYS8 1495 aaKnown RBP23.69■■□□□ 1.38
MRPL49-202ENST00000524482 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
MRPL49-202ENST00000524482 MYO15BQ96JP2 1530 aa23.17■■□□□ 1.3
MRPL49-202ENST00000524482 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
MRPL49-202ENST00000524482 HRCP23327 699 aa23.01■■□□□ 1.27
MRPL49-202ENST00000524482 DCAF1Q9Y4B6 1507 aa22.96■■□□□ 1.27
MRPL49-202ENST00000524482 DCAF8L2P0C7V8 631 aa22.74■■□□□ 1.23
MRPL49-202ENST00000524482 PCGF6Q9BYE7 350 aa22.67■■□□□ 1.22
MRPL49-202ENST00000524482 ABCC9O60706 1549 aa22.48■■□□□ 1.19
MRPL49-202ENST00000524482 PPARGC1BQ86YN6 1023 aaKnown RBP22.36■■□□□ 1.17
MRPL49-202ENST00000524482 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.17
MRPL49-202ENST00000524482 TRIM26Q12899 539 aaPredicted RBP22.25■■□□□ 1.15
MRPL49-202ENST00000524482 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
MRPL49-202ENST00000524482 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
MRPL49-202ENST00000524482 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
MRPL49-202ENST00000524482 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
MRPL49-202ENST00000524482 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
MRPL49-202ENST00000524482 NACADO15069 1562 aa21.75■■□□□ 1.07
MRPL49-202ENST00000524482 FAM9AQ8IZU1 332 aaPredicted RBP21.68■■□□□ 1.06
MRPL49-202ENST00000524482 MROH2BQ7Z745 1585 aa21.66■■□□□ 1.06
MRPL49-202ENST00000524482 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.06
MRPL49-202ENST00000524482 WIZO95785 1651 aa21.61■■□□□ 1.05
MRPL49-202ENST00000524482 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
MRPL49-202ENST00000524482 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
MRPL49-202ENST00000524482 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
MRPL49-202ENST00000524482 EHMT2Q96KQ7 1210 aa21.43■■□□□ 1.02
MRPL49-202ENST00000524482 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
MRPL49-202ENST00000524482 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
MRPL49-202ENST00000524482 WRNQ14191 1432 aaPredicted RBP eCLIP21.27■□□□□ 0.99
MRPL49-202ENST00000524482 CCER1Q8TC90 406 aaPredicted RBP21.22■□□□□ 0.99
MRPL49-202ENST00000524482 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
MRPL49-202ENST00000524482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.2■□□□□ 0.99
MRPL49-202ENST00000524482 ABCC8Q09428 1581 aa21.2■□□□□ 0.99
MRPL49-202ENST00000524482 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
MRPL49-202ENST00000524482 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
MRPL49-202ENST00000524482 CEP162Q5TB80 1403 aa21.14■□□□□ 0.97
MRPL49-202ENST00000524482 ACIN1Q9UKV3 1341 aaKnown RBP21.1■□□□□ 0.97
MRPL49-202ENST00000524482 EEA1Q15075 1411 aa21.1■□□□□ 0.97
MRPL49-202ENST00000524482 TNIKQ9UKE5 1360 aa21.09■□□□□ 0.97
MRPL49-202ENST00000524482 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
MRPL49-202ENST00000524482 SOGA1O94964 1423 aa21.01■□□□□ 0.95
MRPL49-202ENST00000524482 DIEXFQ68CQ4 756 aaKnown RBP21.01■□□□□ 0.95
MRPL49-202ENST00000524482 NEUROD1Q13562 356 aa20.98■□□□□ 0.95
MRPL49-202ENST00000524482 CENPBP07199 599 aaPredicted RBP20.97■□□□□ 0.95
MRPL49-202ENST00000524482 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
MRPL49-202ENST00000524482 CSRNP3Q8WYN3 585 aa20.9■□□□□ 0.94
MRPL49-202ENST00000524482 RUSC2Q8N2Y8 1516 aa20.89■□□□□ 0.93
MRPL49-202ENST00000524482 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
MRPL49-202ENST00000524482 KIF21BO75037 1637 aa20.85■□□□□ 0.93
MRPL49-202ENST00000524482 GTF3C3Q9Y5Q9 886 aa20.82■□□□□ 0.92
MRPL49-202ENST00000524482 PEG3Q9GZU2 1588 aa20.82■□□□□ 0.92
MRPL49-202ENST00000524482 UBTFP17480 764 aaKnown RBP20.81■□□□□ 0.92
MRPL49-202ENST00000524482 CEP164Q9UPV0 1460 aa20.79■□□□□ 0.92
MRPL49-202ENST00000524482 ZNF316A6NFI3 1004 aaPredicted RBP20.79■□□□□ 0.92
MRPL49-202ENST00000524482 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
MRPL49-202ENST00000524482 BICRAQ9NZM4 1560 aa20.7■□□□□ 0.9
MRPL49-202ENST00000524482 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
MRPL49-202ENST00000524482 CLIP1P30622 1438 aa20.67■□□□□ 0.9
MRPL49-202ENST00000524482 VPS8Q8N3P4 1428 aa20.66■□□□□ 0.9
MRPL49-202ENST00000524482 DNAJC5BQ9UF47 199 aa20.58■□□□□ 0.89
MRPL49-202ENST00000524482 MYT1Q01538 1121 aa20.56■□□□□ 0.88
MRPL49-202ENST00000524482 HNRNPUL2Q1KMD3 747 aaKnown RBP20.54■□□□□ 0.88
MRPL49-202ENST00000524482 RAPGEF2Q9Y4G8 1499 aa20.52■□□□□ 0.88
MRPL49-202ENST00000524482 PABPN1Q86U42 306 aaKnown RBP eCLIP20.52■□□□□ 0.88
MRPL49-202ENST00000524482 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
MRPL49-202ENST00000524482 TOP2BQ02880 1626 aa20.5■□□□□ 0.87
MRPL49-202ENST00000524482 MIER1Q8N108 512 aa20.48■□□□□ 0.87
MRPL49-202ENST00000524482 YTHDC1Q96MU7 727 aaKnown RBP20.48■□□□□ 0.87
MRPL49-202ENST00000524482 BIVM-ERCC5R4GMW8 1640 aa20.48■□□□□ 0.87
MRPL49-202ENST00000524482 APLP2Q06481 763 aa20.47■□□□□ 0.87
MRPL49-202ENST00000524482 ERICH3Q5RHP9 1530 aa20.44■□□□□ 0.86
MRPL49-202ENST00000524482 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
MRPL49-202ENST00000524482 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
MRPL49-202ENST00000524482 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
MRPL49-202ENST00000524482 DHX57Q6P158 1386 aaKnown RBP20.31■□□□□ 0.84
MRPL49-202ENST00000524482 RRBP1Q9P2E9 1410 aaKnown RBP20.24■□□□□ 0.83
MRPL49-202ENST00000524482 RANGAP1P46060 587 aaPredicted RBP20.22■□□□□ 0.83
MRPL49-202ENST00000524482 CUX2O14529 1486 aa20.22■□□□□ 0.83
MRPL49-202ENST00000524482 HMGXB3Q12766 1538 aa20.17■□□□□ 0.82
MRPL49-202ENST00000524482 CUX1P39880 1505 aa20.16■□□□□ 0.82
MRPL49-202ENST00000524482 KIF27Q86VH2 1401 aa20.13■□□□□ 0.81
MRPL49-202ENST00000524482 KANK4Q5T7N3 995 aaPredicted RBP20.12■□□□□ 0.81
MRPL49-202ENST00000524482 CCNB3Q8WWL7 1395 aa20.08■□□□□ 0.8
MRPL49-202ENST00000524482 ARHGAP35Q9NRY4 1499 aa20.08■□□□□ 0.8
MRPL49-202ENST00000524482 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
MRPL49-202ENST00000524482 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
MRPL49-202ENST00000524482 MAP3K1Q13233 1512 aa20.01■□□□□ 0.79
MRPL49-202ENST00000524482 SUPT16HQ9Y5B9 1047 aaKnown RBP20.01■□□□□ 0.79
MRPL49-202ENST00000524482 TIAM1Q13009 1591 aa20■□□□□ 0.79
MRPL49-202ENST00000524482 CFTRP13569 1480 aa19.99■□□□□ 0.79
MRPL49-202ENST00000524482 MAPKBP1O60336 1514 aa19.97■□□□□ 0.79
MRPL49-202ENST00000524482 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
MRPL49-202ENST00000524482 CFAP43Q8NDM7 1665 aa19.92■□□□□ 0.78
MRPL49-202ENST00000524482 LRRC9Q6ZRR7 1453 aa19.86■□□□□ 0.77
MRPL49-202ENST00000524482 SETD5Q9C0A6 1442 aa19.86■□□□□ 0.77
MRPL49-202ENST00000524482 ITGAEP38570 1179 aa19.83■□□□□ 0.77
MRPL49-202ENST00000524482 IGF1RP08069 1367 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms