RNA–Protein interactions for RNA: ENST00000523545.1

PPP1R42-213, Transcript of protein phosphatase 1 regulatory subunit 42, humanhuman

TSL 3

Gene PPP1R42, Length 462 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R42-213ENST00000523545 AEBP2Q6ZN18 517 aaPredicted RBP36.57■■■■□ 3.44
PPP1R42-213ENST00000523545 CHIC1Q5VXU3 224 aa35.84■■■■□ 3.33
PPP1R42-213ENST00000523545 PHF23Q9BUL5 403 aaPredicted RBP31.54■■■□□ 2.64
PPP1R42-213ENST00000523545 SENP3Q9H4L4 574 aaPredicted RBP30.97■■■□□ 2.55
PPP1R42-213ENST00000523545 NISCHQ9Y2I1 1504 aa30.42■■■□□ 2.46
PPP1R42-213ENST00000523545 PLPPR3Q6T4P5 718 aa29.14■■■□□ 2.26
PPP1R42-213ENST00000523545 FOXD1Q16676 465 aa28.76■■■□□ 2.19
PPP1R42-213ENST00000523545 PPP6R1Q9UPN7 881 aa27.79■■■□□ 2.04
PPP1R42-213ENST00000523545 ADRA2BP18089 450 aa27.76■■■□□ 2.03
PPP1R42-213ENST00000523545 ABCC9O60706 1549 aa27.64■■■□□ 2.02
PPP1R42-213ENST00000523545 CCDC180Q9P1Z9 1646 aa27.52■■■□□ 2
PPP1R42-213ENST00000523545 PIAS4Q8N2W9 510 aaPredicted RBP27.12■■□□□ 1.93
PPP1R42-213ENST00000523545 MSH5O43196 834 aa26.44■■□□□ 1.82
PPP1R42-213ENST00000523545 RB1CC1Q8TDY2 1594 aa26.3■■□□□ 1.8
PPP1R42-213ENST00000523545 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
PPP1R42-213ENST00000523545 NACADO15069 1562 aa26.06■■□□□ 1.76
PPP1R42-213ENST00000523545 PPP4R3CPQ6ZMV5 832 aa25.71■■□□□ 1.71
PPP1R42-213ENST00000523545 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
PPP1R42-213ENST00000523545 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
PPP1R42-213ENST00000523545 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
PPP1R42-213ENST00000523545 UNC13AQ9UPW8 1703 aa25.58■■□□□ 1.69
PPP1R42-213ENST00000523545 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
PPP1R42-213ENST00000523545 SCAF1Q9H7N4 1312 aaKnown RBP25.37■■□□□ 1.65
PPP1R42-213ENST00000523545 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
PPP1R42-213ENST00000523545 KCNA4P22459 653 aa25.26■■□□□ 1.63
PPP1R42-213ENST00000523545 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
PPP1R42-213ENST00000523545 ZCCHC6Q5VYS8 1495 aaKnown RBP25.21■■□□□ 1.63
PPP1R42-213ENST00000523545 MAPK8IP2Q13387 824 aaPredicted RBP25.15■■□□□ 1.62
PPP1R42-213ENST00000523545 NCBP3Q53F19 620 aaKnown RBP25.05■■□□□ 1.6
PPP1R42-213ENST00000523545 CC2D2AQ9P2K1 1620 aa25■■□□□ 1.59
PPP1R42-213ENST00000523545 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
PPP1R42-213ENST00000523545 CNKSR2Q8WXI2 1034 aa24.95■■□□□ 1.58
PPP1R42-213ENST00000523545 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
PPP1R42-213ENST00000523545 EIF4G1Q04637 1599 aaKnown RBP24.92■■□□□ 1.58
PPP1R42-213ENST00000523545 DMRT2Q9Y5R5 561 aa24.76■■□□□ 1.55
PPP1R42-213ENST00000523545 NPM3O75607 178 aaKnown RBP24.7■■□□□ 1.54
PPP1R42-213ENST00000523545 RNF216Q9NWF9 866 aaPredicted RBP24.43■■□□□ 1.5
PPP1R42-213ENST00000523545 HOXD11P31277 338 aaPredicted RBP24.31■■□□□ 1.48
PPP1R42-213ENST00000523545 DNAJC5Q9H3Z4 198 aa24.24■■□□□ 1.47
PPP1R42-213ENST00000523545 CUX2O14529 1486 aa24.08■■□□□ 1.45
PPP1R42-213ENST00000523545 SLC4A1APQ9BWU0 796 aaKnown RBP24.06■■□□□ 1.44
PPP1R42-213ENST00000523545 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
PPP1R42-213ENST00000523545 POTEDQ86YR6 584 aa23.97■■□□□ 1.43
PPP1R42-213ENST00000523545 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
PPP1R42-213ENST00000523545 HMGXB3Q12766 1538 aa23.89■■□□□ 1.42
PPP1R42-213ENST00000523545 ATAD2BQ9ULI0 1458 aa23.89■■□□□ 1.42
PPP1R42-213ENST00000523545 SMARCA2P51531 1590 aa23.87■■□□□ 1.41
PPP1R42-213ENST00000523545 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
PPP1R42-213ENST00000523545 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
PPP1R42-213ENST00000523545 BAZ1BQ9UIG0 1483 aaKnown RBP23.67■■□□□ 1.38
PPP1R42-213ENST00000523545 DCAF8L1A6NGE4 600 aa23.65■■□□□ 1.38
PPP1R42-213ENST00000523545 PEG3Q9GZU2 1588 aa23.65■■□□□ 1.38
PPP1R42-213ENST00000523545 NESP48681 1621 aa23.64■■□□□ 1.38
PPP1R42-213ENST00000523545 THOC2Q8NI27 1593 aaKnown RBP23.58■■□□□ 1.37
PPP1R42-213ENST00000523545 LAMC3Q9Y6N6 1575 aa23.57■■□□□ 1.36
PPP1R42-213ENST00000523545 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
PPP1R42-213ENST00000523545 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
PPP1R42-213ENST00000523545 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.33
PPP1R42-213ENST00000523545 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
PPP1R42-213ENST00000523545 SLC4A2P04920 1241 aa23.31■■□□□ 1.32
PPP1R42-213ENST00000523545 CADPSQ9ULU8 1353 aa23.26■■□□□ 1.31
PPP1R42-213ENST00000523545 ZBTB22O15209 634 aa23.25■■□□□ 1.31
PPP1R42-213ENST00000523545 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
PPP1R42-213ENST00000523545 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
PPP1R42-213ENST00000523545 WDR62O43379 1518 aa23.22■■□□□ 1.31
PPP1R42-213ENST00000523545 FOXD4L1Q9NU39 408 aa23.2■■□□□ 1.3
PPP1R42-213ENST00000523545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.29
PPP1R42-213ENST00000523545 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
PPP1R42-213ENST00000523545 WIZO95785 1651 aa23.07■■□□□ 1.28
PPP1R42-213ENST00000523545 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
PPP1R42-213ENST00000523545 TRIM41Q8WV44 630 aa23■■□□□ 1.27
PPP1R42-213ENST00000523545 CFTRP13569 1480 aa22.96■■□□□ 1.27
PPP1R42-213ENST00000523545 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
PPP1R42-213ENST00000523545 MYCNP04198 464 aaPredicted RBP22.81■■□□□ 1.24
PPP1R42-213ENST00000523545 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
PPP1R42-213ENST00000523545 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
PPP1R42-213ENST00000523545 U3KPZ7 1027 aaPredicted RBP22.8■■□□□ 1.24
PPP1R42-213ENST00000523545 OSCARQ8IYS5 282 aa22.79■■□□□ 1.24
PPP1R42-213ENST00000523545 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
PPP1R42-213ENST00000523545 RNF39Q9H2S5 420 aa22.69■■□□□ 1.22
PPP1R42-213ENST00000523545 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
PPP1R42-213ENST00000523545 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
PPP1R42-213ENST00000523545 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
PPP1R42-213ENST00000523545 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
PPP1R42-213ENST00000523545 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
PPP1R42-213ENST00000523545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.53■■□□□ 1.2
PPP1R42-213ENST00000523545 HNRNPUL2Q1KMD3 747 aaKnown RBP22.53■■□□□ 1.2
PPP1R42-213ENST00000523545 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
PPP1R42-213ENST00000523545 CCDC88BA6NC98 1476 aa22.53■■□□□ 1.2
PPP1R42-213ENST00000523545 TOPBP1Q92547 1522 aa22.52■■□□□ 1.2
PPP1R42-213ENST00000523545 ARHGEF11O15085 1522 aa22.51■■□□□ 1.19
PPP1R42-213ENST00000523545 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
PPP1R42-213ENST00000523545 SAMD1Q6SPF0 538 aaPredicted RBP22.47■■□□□ 1.19
PPP1R42-213ENST00000523545 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
PPP1R42-213ENST00000523545 C1QBPQ07021 282 aaKnown RBP22.42■■□□□ 1.18
PPP1R42-213ENST00000523545 ATXN8OSP0DMR3 200 aa22.38■■□□□ 1.17
PPP1R42-213ENST00000523545 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
PPP1R42-213ENST00000523545 CHD1O14646 1710 aa22.31■■□□□ 1.16
PPP1R42-213ENST00000523545 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
PPP1R42-213ENST00000523545 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms