RNA–Protein interactions for RNA: ENST00000522394.1

RRM2B-209, Transcript of ribonucleotide reductase regulatory TP53 inducible subunit M2B, humanhuman

TSL 2

Gene RRM2B, Length 389 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRM2B-209ENST00000522394 AEBP2Q6ZN18 517 aaPredicted RBP23.83■■□□□ 1.41
RRM2B-209ENST00000522394 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
RRM2B-209ENST00000522394 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
RRM2B-209ENST00000522394 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
RRM2B-209ENST00000522394 PLPPR3Q6T4P5 718 aa19.42■□□□□ 0.7
RRM2B-209ENST00000522394 FOXD1Q16676 465 aa18.88■□□□□ 0.61
RRM2B-209ENST00000522394 ADRA2BP18089 450 aa18.35■□□□□ 0.53
RRM2B-209ENST00000522394 PPP6R1Q9UPN7 881 aa18.26■□□□□ 0.51
RRM2B-209ENST00000522394 KCNA4P22459 653 aa17.74■□□□□ 0.43
RRM2B-209ENST00000522394 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
RRM2B-209ENST00000522394 MSH5O43196 834 aa17.56■□□□□ 0.4
RRM2B-209ENST00000522394 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
RRM2B-209ENST00000522394 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
RRM2B-209ENST00000522394 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
RRM2B-209ENST00000522394 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
RRM2B-209ENST00000522394 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
RRM2B-209ENST00000522394 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
RRM2B-209ENST00000522394 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
RRM2B-209ENST00000522394 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
RRM2B-209ENST00000522394 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
RRM2B-209ENST00000522394 SCAF1Q9H7N4 1312 aaKnown RBP16.46■□□□□ 0.23
RRM2B-209ENST00000522394 ABCC9O60706 1549 aa16.45■□□□□ 0.22
RRM2B-209ENST00000522394 ZBTB22O15209 634 aa16.41■□□□□ 0.22
RRM2B-209ENST00000522394 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
RRM2B-209ENST00000522394 MAPK8IP2Q13387 824 aaPredicted RBP16.37■□□□□ 0.21
RRM2B-209ENST00000522394 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
RRM2B-209ENST00000522394 DNAJC5Q9H3Z4 198 aa16.08■□□□□ 0.16
RRM2B-209ENST00000522394 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
RRM2B-209ENST00000522394 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
RRM2B-209ENST00000522394 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
RRM2B-209ENST00000522394 SLC4A2P04920 1241 aa15.74■□□□□ 0.11
RRM2B-209ENST00000522394 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
RRM2B-209ENST00000522394 MYCNP04198 464 aaPredicted RBP15.43■□□□□ 0.06
RRM2B-209ENST00000522394 ATXN8OSP0DMR3 200 aa15.34■□□□□ 0.05
RRM2B-209ENST00000522394 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
RRM2B-209ENST00000522394 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
RRM2B-209ENST00000522394 FKBP8Q14318 412 aa15.11■□□□□ 0.01
RRM2B-209ENST00000522394 CCDC180Q9P1Z9 1646 aa15.08■□□□□ 0
RRM2B-209ENST00000522394 RTN4Q9NQC3 1192 aaKnown RBP15.08■□□□□ 0
RRM2B-209ENST00000522394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
RRM2B-209ENST00000522394 RB1CC1Q8TDY2 1594 aa15.02■□□□□ -0
RRM2B-209ENST00000522394 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
RRM2B-209ENST00000522394 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
RRM2B-209ENST00000522394 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
RRM2B-209ENST00000522394 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
RRM2B-209ENST00000522394 AMER1Q5JTC6 1135 aaPredicted RBP14.94□□□□□ -0.02
RRM2B-209ENST00000522394 CECR2Q9BXF3 1484 aa14.92□□□□□ -0.02
RRM2B-209ENST00000522394 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
RRM2B-209ENST00000522394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
RRM2B-209ENST00000522394 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
RRM2B-209ENST00000522394 C1QBPQ07021 282 aaKnown RBP14.78□□□□□ -0.04
RRM2B-209ENST00000522394 CC2D2AQ9P2K1 1620 aa14.72□□□□□ -0.05
RRM2B-209ENST00000522394 SLC24A1O60721 1099 aa14.69□□□□□ -0.06
RRM2B-209ENST00000522394 ZNF219Q9P2Y4 722 aaPredicted RBP14.67□□□□□ -0.06
RRM2B-209ENST00000522394 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
RRM2B-209ENST00000522394 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
RRM2B-209ENST00000522394 NACADO15069 1562 aa14.63□□□□□ -0.07
RRM2B-209ENST00000522394 UNC13AQ9UPW8 1703 aa14.62□□□□□ -0.07
RRM2B-209ENST00000522394 CUX2O14529 1486 aa14.57□□□□□ -0.08
RRM2B-209ENST00000522394 APLP2Q06481 763 aa14.49□□□□□ -0.09
RRM2B-209ENST00000522394 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
RRM2B-209ENST00000522394 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
RRM2B-209ENST00000522394 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
RRM2B-209ENST00000522394 EIF4G1Q04637 1599 aaKnown RBP14.38□□□□□ -0.11
RRM2B-209ENST00000522394 TRHP20396 242 aaPredicted RBP14.32□□□□□ -0.12
RRM2B-209ENST00000522394 PROM2Q8N271 834 aa14.32□□□□□ -0.12
RRM2B-209ENST00000522394 CAPN15O75808 1086 aa14.31□□□□□ -0.12
RRM2B-209ENST00000522394 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
RRM2B-209ENST00000522394 POLA2Q14181 598 aa14.26□□□□□ -0.13
RRM2B-209ENST00000522394 FBXO3Q9UK99 471 aa14.24□□□□□ -0.13
RRM2B-209ENST00000522394 FBLN2P98095 1184 aa14.22□□□□□ -0.13
RRM2B-209ENST00000522394 SHROOM4Q9ULL8 1493 aa14.21□□□□□ -0.13
RRM2B-209ENST00000522394 VASPP50552 380 aaPredicted RBP14.15□□□□□ -0.14
RRM2B-209ENST00000522394 DSG3P32926 999 aa14.14□□□□□ -0.15
RRM2B-209ENST00000522394 ABCB7O75027 752 aa14.07□□□□□ -0.16
RRM2B-209ENST00000522394 IFNLR1Q8IU57 520 aaPredicted RBP14.07□□□□□ -0.16
RRM2B-209ENST00000522394 ILDR1Q86SU0 546 aaPredicted RBP14.02□□□□□ -0.17
RRM2B-209ENST00000522394 MYO15BQ96JP2 1530 aa13.98□□□□□ -0.17
RRM2B-209ENST00000522394 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
RRM2B-209ENST00000522394 OSCARQ8IYS5 282 aa13.89□□□□□ -0.19
RRM2B-209ENST00000522394 PKD2Q13563 968 aa13.88□□□□□ -0.19
RRM2B-209ENST00000522394 SCRIBQ14160 1630 aa13.87□□□□□ -0.19
RRM2B-209ENST00000522394 PLCB2Q00722 1185 aa13.83□□□□□ -0.2
RRM2B-209ENST00000522394 NESP48681 1621 aa13.79□□□□□ -0.2
RRM2B-209ENST00000522394 ZNF692Q9BU19 519 aaPredicted RBP13.76□□□□□ -0.21
RRM2B-209ENST00000522394 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
RRM2B-209ENST00000522394 THOC2Q8NI27 1593 aaKnown RBP13.74□□□□□ -0.21
RRM2B-209ENST00000522394 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
RRM2B-209ENST00000522394 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
RRM2B-209ENST00000522394 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
RRM2B-209ENST00000522394 CYB5RLQ6IPT4 315 aa13.69□□□□□ -0.22
RRM2B-209ENST00000522394 SPOCK2Q92563 424 aa13.68□□□□□ -0.22
RRM2B-209ENST00000522394 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
RRM2B-209ENST00000522394 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
RRM2B-209ENST00000522394 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
RRM2B-209ENST00000522394 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
RRM2B-209ENST00000522394 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
RRM2B-209ENST00000522394 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
RRM2B-209ENST00000522394 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
RRM2B-209ENST00000522394 SMARCA2P51531 1590 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms