RNA–Protein interactions for RNA: ENST00000521797.1

NUDCD2-204, Transcript of NudC domain containing 2, humanhuman

TSL 3

Gene NUDCD2, Length 652 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD2-204ENST00000521797 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
NUDCD2-204ENST00000521797 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
NUDCD2-204ENST00000521797 PHF23Q9BUL5 403 aaPredicted RBP13.07□□□□□ -0.32
NUDCD2-204ENST00000521797 SENP3Q9H4L4 574 aaPredicted RBP12.76□□□□□ -0.37
NUDCD2-204ENST00000521797 NISCHQ9Y2I1 1504 aa12.14□□□□□ -0.47
NUDCD2-204ENST00000521797 PLPPR3Q6T4P5 718 aa12.01□□□□□ -0.49
NUDCD2-204ENST00000521797 FOXD1Q16676 465 aa11.89□□□□□ -0.51
NUDCD2-204ENST00000521797 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
NUDCD2-204ENST00000521797 ADRA2BP18089 450 aa11.49□□□□□ -0.57
NUDCD2-204ENST00000521797 ABCC9O60706 1549 aa11.47□□□□□ -0.57
NUDCD2-204ENST00000521797 PIAS4Q8N2W9 510 aaPredicted RBP11.21□□□□□ -0.61
NUDCD2-204ENST00000521797 DNAJC5BQ9UF47 199 aa11.19□□□□□ -0.62
NUDCD2-204ENST00000521797 CCDC180Q9P1Z9 1646 aa11.01□□□□□ -0.65
NUDCD2-204ENST00000521797 MSH5O43196 834 aa10.86□□□□□ -0.67
NUDCD2-204ENST00000521797 RB1CC1Q8TDY2 1594 aa10.72□□□□□ -0.69
NUDCD2-204ENST00000521797 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
NUDCD2-204ENST00000521797 PPP4R3CPQ6ZMV5 832 aa10.62□□□□□ -0.71
NUDCD2-204ENST00000521797 DNAJC5Q9H3Z4 198 aa10.6□□□□□ -0.71
NUDCD2-204ENST00000521797 NACADO15069 1562 aa10.56□□□□□ -0.72
NUDCD2-204ENST00000521797 KCNA4P22459 653 aa10.5□□□□□ -0.73
NUDCD2-204ENST00000521797 BICRAQ9NZM4 1560 aa10.44□□□□□ -0.74
NUDCD2-204ENST00000521797 MAPK8IP2Q13387 824 aaPredicted RBP10.41□□□□□ -0.74
NUDCD2-204ENST00000521797 CECR2Q9BXF3 1484 aa10.41□□□□□ -0.74
NUDCD2-204ENST00000521797 SCAF1Q9H7N4 1312 aaKnown RBP10.38□□□□□ -0.75
NUDCD2-204ENST00000521797 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
NUDCD2-204ENST00000521797 MYO15BQ96JP2 1530 aa10.34□□□□□ -0.75
NUDCD2-204ENST00000521797 SHROOM4Q9ULL8 1493 aa10.34□□□□□ -0.75
NUDCD2-204ENST00000521797 CC2D2AQ9P2K1 1620 aa10.32□□□□□ -0.76
NUDCD2-204ENST00000521797 UNC13AQ9UPW8 1703 aa10.31□□□□□ -0.76
NUDCD2-204ENST00000521797 NCBP3Q53F19 620 aaKnown RBP10.29□□□□□ -0.76
NUDCD2-204ENST00000521797 CNKSR2Q8WXI2 1034 aa10.28□□□□□ -0.76
NUDCD2-204ENST00000521797 NPM3O75607 178 aaKnown RBP10.24□□□□□ -0.77
NUDCD2-204ENST00000521797 DMRT2Q9Y5R5 561 aa10.22□□□□□ -0.77
NUDCD2-204ENST00000521797 EIF4G1Q04637 1599 aaKnown RBP10.22□□□□□ -0.77
NUDCD2-204ENST00000521797 CUX2O14529 1486 aa10.11□□□□□ -0.79
NUDCD2-204ENST00000521797 RNF216Q9NWF9 866 aaPredicted RBP10.07□□□□□ -0.8
NUDCD2-204ENST00000521797 DCAF1Q9Y4B6 1507 aa10.03□□□□□ -0.8
NUDCD2-204ENST00000521797 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
NUDCD2-204ENST00000521797 SCRIBQ14160 1630 aa10.02□□□□□ -0.81
NUDCD2-204ENST00000521797 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
NUDCD2-204ENST00000521797 SLC4A1APQ9BWU0 796 aaKnown RBP9.97□□□□□ -0.81
NUDCD2-204ENST00000521797 ERCC6Q03468 1493 aa9.94□□□□□ -0.82
NUDCD2-204ENST00000521797 TRIM41Q8WV44 630 aa9.89□□□□□ -0.83
NUDCD2-204ENST00000521797 POTEDQ86YR6 584 aa9.84□□□□□ -0.83
NUDCD2-204ENST00000521797 NCAPD3P42695 1498 aa9.81□□□□□ -0.84
NUDCD2-204ENST00000521797 EHMT2Q96KQ7 1210 aa9.81□□□□□ -0.84
NUDCD2-204ENST00000521797 DCAF8L1A6NGE4 600 aa9.75□□□□□ -0.85
NUDCD2-204ENST00000521797 NESP48681 1621 aa9.74□□□□□ -0.85
NUDCD2-204ENST00000521797 THOC2Q8NI27 1593 aaKnown RBP9.71□□□□□ -0.85
NUDCD2-204ENST00000521797 ZBTB22O15209 634 aa9.71□□□□□ -0.86
NUDCD2-204ENST00000521797 ATAD2BQ9ULI0 1458 aa9.7□□□□□ -0.86
NUDCD2-204ENST00000521797 SLC4A2P04920 1241 aa9.67□□□□□ -0.86
NUDCD2-204ENST00000521797 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
NUDCD2-204ENST00000521797 CSRNP3Q8WYN3 585 aa9.65□□□□□ -0.86
NUDCD2-204ENST00000521797 SMARCA2P51531 1590 aa9.62□□□□□ -0.87
NUDCD2-204ENST00000521797 PDS5BQ9NTI5 1447 aa9.6□□□□□ -0.87
NUDCD2-204ENST00000521797 FOXD4L1Q9NU39 408 aa9.6□□□□□ -0.87
NUDCD2-204ENST00000521797 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
NUDCD2-204ENST00000521797 OSCARQ8IYS5 282 aa9.56□□□□□ -0.88
NUDCD2-204ENST00000521797 BAZ1BQ9UIG0 1483 aaKnown RBP9.55□□□□□ -0.88
NUDCD2-204ENST00000521797 MRC2Q9UBG0 1479 aa9.53□□□□□ -0.88
NUDCD2-204ENST00000521797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.52□□□□□ -0.89
NUDCD2-204ENST00000521797 SMARCA4P51532 1647 aa9.52□□□□□ -0.89
NUDCD2-204ENST00000521797 WDR62O43379 1518 aa9.51□□□□□ -0.89
NUDCD2-204ENST00000521797 BAZ1AQ9NRL2 1556 aaPredicted RBP9.51□□□□□ -0.89
NUDCD2-204ENST00000521797 CADPSQ9ULU8 1353 aa9.49□□□□□ -0.89
NUDCD2-204ENST00000521797 KIF21AQ7Z4S6 1674 aa9.48□□□□□ -0.89
NUDCD2-204ENST00000521797 PEG3Q9GZU2 1588 aa9.48□□□□□ -0.89
NUDCD2-204ENST00000521797 U3KPZ7 1027 aaPredicted RBP9.45□□□□□ -0.9
NUDCD2-204ENST00000521797 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
NUDCD2-204ENST00000521797 RIMBP3CA6NJZ7 1639 aa9.42□□□□□ -0.9
NUDCD2-204ENST00000521797 RIMBP3BA6NNM3 1639 aa9.42□□□□□ -0.9
NUDCD2-204ENST00000521797 RIMBP3Q9UFD9 1639 aa9.42□□□□□ -0.9
NUDCD2-204ENST00000521797 ARHGEF11O15085 1522 aa9.4□□□□□ -0.91
NUDCD2-204ENST00000521797 CEP164Q9UPV0 1460 aa9.39□□□□□ -0.91
NUDCD2-204ENST00000521797 RNF39Q9H2S5 420 aa9.36□□□□□ -0.91
NUDCD2-204ENST00000521797 FANCD2Q9BXW9 1451 aa9.35□□□□□ -0.91
NUDCD2-204ENST00000521797 TRHP20396 242 aaPredicted RBP9.35□□□□□ -0.91
NUDCD2-204ENST00000521797 MROH2BQ7Z745 1585 aa9.34□□□□□ -0.91
NUDCD2-204ENST00000521797 CYB5RLQ6IPT4 315 aa9.34□□□□□ -0.91
NUDCD2-204ENST00000521797 URB2Q14146 1524 aaKnown RBP9.31□□□□□ -0.92
NUDCD2-204ENST00000521797 ARAP1Q96P48 1450 aa9.3□□□□□ -0.92
NUDCD2-204ENST00000521797 CFTRP13569 1480 aa9.29□□□□□ -0.92
NUDCD2-204ENST00000521797 ZNF608Q9ULD9 1512 aaPredicted RBP9.26□□□□□ -0.93
NUDCD2-204ENST00000521797 IFT140Q96RY7 1462 aa9.24□□□□□ -0.93
NUDCD2-204ENST00000521797 SAMD1Q6SPF0 538 aaPredicted RBP9.24□□□□□ -0.93
NUDCD2-204ENST00000521797 ATF5Q9Y2D1 282 aaPredicted RBP9.24□□□□□ -0.93
NUDCD2-204ENST00000521797 RSF1Q96T23 1441 aaPredicted RBP9.23□□□□□ -0.93
NUDCD2-204ENST00000521797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.23□□□□□ -0.93
NUDCD2-204ENST00000521797 HNRNPUL2Q1KMD3 747 aaKnown RBP9.23□□□□□ -0.93
NUDCD2-204ENST00000521797 ATXN8OSP0DMR3 200 aa9.21□□□□□ -0.94
NUDCD2-204ENST00000521797 C1QBPQ07021 282 aaKnown RBP9.2□□□□□ -0.94
NUDCD2-204ENST00000521797 SPINK5Q9NQ38 1064 aaPredicted RBP9.17□□□□□ -0.94
NUDCD2-204ENST00000521797 EIF4G3O43432 1585 aaKnown RBP9.13□□□□□ -0.95
NUDCD2-204ENST00000521797 WIZO95785 1651 aa9.13□□□□□ -0.95
NUDCD2-204ENST00000521797 TOPBP1Q92547 1522 aa9.11□□□□□ -0.95
NUDCD2-204ENST00000521797 AQRO60306 1485 aaKnown RBP eCLIP9.11□□□□□ -0.951e-7■■■■■ 29.9
NUDCD2-204ENST00000521797 FBLN2P98095 1184 aa9.1□□□□□ -0.95
NUDCD2-204ENST00000521797 APLP2Q06481 763 aa9.1□□□□□ -0.95
NUDCD2-204ENST00000521797 ILDR1Q86SU0 546 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 489 ms