RNA–Protein interactions for RNA: ENST00000515786.2

KCNIP4-210, Transcript of potassium voltage-gated channel interacting protein 4, humanhuman

TSL 5

Gene KCNIP4, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-210ENST00000515786 AEBP2Q6ZN18 517 aaPredicted RBP20.98■□□□□ 0.95
KCNIP4-210ENST00000515786 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
KCNIP4-210ENST00000515786 SENP3Q9H4L4 574 aaPredicted RBP18.09■□□□□ 0.49
KCNIP4-210ENST00000515786 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
KCNIP4-210ENST00000515786 FOXD1Q16676 465 aa16.74■□□□□ 0.27
KCNIP4-210ENST00000515786 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
KCNIP4-210ENST00000515786 MSH5O43196 834 aa15.85■□□□□ 0.13
KCNIP4-210ENST00000515786 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
KCNIP4-210ENST00000515786 PPP6R1Q9UPN7 881 aa15.52■□□□□ 0.08
KCNIP4-210ENST00000515786 ADRA2BP18089 450 aa15.47■□□□□ 0.07
KCNIP4-210ENST00000515786 POTEDQ86YR6 584 aa15.47■□□□□ 0.07
KCNIP4-210ENST00000515786 NISCHQ9Y2I1 1504 aa14.6□□□□□ -0.07
KCNIP4-210ENST00000515786 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
KCNIP4-210ENST00000515786 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
KCNIP4-210ENST00000515786 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
KCNIP4-210ENST00000515786 ABCC9O60706 1549 aa13.99□□□□□ -0.17
KCNIP4-210ENST00000515786 PPP4R3CPQ6ZMV5 832 aa13.92□□□□□ -0.18
KCNIP4-210ENST00000515786 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
KCNIP4-210ENST00000515786 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
KCNIP4-210ENST00000515786 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
KCNIP4-210ENST00000515786 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
KCNIP4-210ENST00000515786 DCAF8L1A6NGE4 600 aa13.63□□□□□ -0.23
KCNIP4-210ENST00000515786 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
KCNIP4-210ENST00000515786 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
KCNIP4-210ENST00000515786 CCDC180Q9P1Z9 1646 aa13.46□□□□□ -0.26
KCNIP4-210ENST00000515786 RNF39Q9H2S5 420 aa13.44□□□□□ -0.26
KCNIP4-210ENST00000515786 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
KCNIP4-210ENST00000515786 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
KCNIP4-210ENST00000515786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.07□□□□□ -0.32
KCNIP4-210ENST00000515786 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
KCNIP4-210ENST00000515786 RB1CC1Q8TDY2 1594 aa12.94□□□□□ -0.34
KCNIP4-210ENST00000515786 DNAJC5Q9H3Z4 198 aa12.94□□□□□ -0.34
KCNIP4-210ENST00000515786 UNC13AQ9UPW8 1703 aa12.86□□□□□ -0.35
KCNIP4-210ENST00000515786 KCNA4P22459 653 aa12.78□□□□□ -0.36
KCNIP4-210ENST00000515786 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.37
KCNIP4-210ENST00000515786 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
KCNIP4-210ENST00000515786 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
KCNIP4-210ENST00000515786 NACADO15069 1562 aa12.72□□□□□ -0.37
KCNIP4-210ENST00000515786 CECR2Q9BXF3 1484 aa12.62□□□□□ -0.39
KCNIP4-210ENST00000515786 APLP2Q06481 763 aa12.6□□□□□ -0.39
KCNIP4-210ENST00000515786 CAPN15O75808 1086 aa12.58□□□□□ -0.4
KCNIP4-210ENST00000515786 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
KCNIP4-210ENST00000515786 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
KCNIP4-210ENST00000515786 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
KCNIP4-210ENST00000515786 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
KCNIP4-210ENST00000515786 CC2D2AQ9P2K1 1620 aa12.54□□□□□ -0.4
KCNIP4-210ENST00000515786 DSG3P32926 999 aa12.53□□□□□ -0.4
KCNIP4-210ENST00000515786 MYO15BQ96JP2 1530 aa12.49□□□□□ -0.41
KCNIP4-210ENST00000515786 SHROOM4Q9ULL8 1493 aa12.45□□□□□ -0.42
KCNIP4-210ENST00000515786 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
KCNIP4-210ENST00000515786 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
KCNIP4-210ENST00000515786 EIF4G1Q04637 1599 aaKnown RBP12.35□□□□□ -0.43
KCNIP4-210ENST00000515786 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
KCNIP4-210ENST00000515786 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
KCNIP4-210ENST00000515786 ABCB7O75027 752 aa12.22□□□□□ -0.45
KCNIP4-210ENST00000515786 TRIM41Q8WV44 630 aa12.22□□□□□ -0.45
KCNIP4-210ENST00000515786 CUX2O14529 1486 aa12.19□□□□□ -0.46
KCNIP4-210ENST00000515786 SCRIBQ14160 1630 aa12.15□□□□□ -0.46
KCNIP4-210ENST00000515786 POTEHQ6S545 545 aa12.13□□□□□ -0.47
KCNIP4-210ENST00000515786 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
KCNIP4-210ENST00000515786 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
KCNIP4-210ENST00000515786 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
KCNIP4-210ENST00000515786 ERCC6Q03468 1493 aa12.08□□□□□ -0.47
KCNIP4-210ENST00000515786 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
KCNIP4-210ENST00000515786 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.48
KCNIP4-210ENST00000515786 POLA2Q14181 598 aa12□□□□□ -0.49
KCNIP4-210ENST00000515786 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
KCNIP4-210ENST00000515786 NESP48681 1621 aa11.85□□□□□ -0.51
KCNIP4-210ENST00000515786 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
KCNIP4-210ENST00000515786 ATF5Q9Y2D1 282 aaPredicted RBP11.8□□□□□ -0.52
KCNIP4-210ENST00000515786 NCAPD3P42695 1498 aa11.78□□□□□ -0.52
KCNIP4-210ENST00000515786 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.53
KCNIP4-210ENST00000515786 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
KCNIP4-210ENST00000515786 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
KCNIP4-210ENST00000515786 ZBTB22O15209 634 aa11.71□□□□□ -0.53
KCNIP4-210ENST00000515786 SMARCA2P51531 1590 aa11.7□□□□□ -0.54
KCNIP4-210ENST00000515786 ATAD2BQ9ULI0 1458 aa11.69□□□□□ -0.54
KCNIP4-210ENST00000515786 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
KCNIP4-210ENST00000515786 KIF21AQ7Z4S6 1674 aa11.64□□□□□ -0.55
KCNIP4-210ENST00000515786 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
KCNIP4-210ENST00000515786 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
KCNIP4-210ENST00000515786 REM2Q8IYK8 340 aaPredicted RBP11.57□□□□□ -0.56
KCNIP4-210ENST00000515786 PDS5BQ9NTI5 1447 aa11.57□□□□□ -0.56
KCNIP4-210ENST00000515786 BAZ1AQ9NRL2 1556 aaPredicted RBP11.57□□□□□ -0.56
KCNIP4-210ENST00000515786 FBLN2P98095 1184 aa11.54□□□□□ -0.56
KCNIP4-210ENST00000515786 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
KCNIP4-210ENST00000515786 SMARCA4P51532 1647 aa11.53□□□□□ -0.56
KCNIP4-210ENST00000515786 PEG3Q9GZU2 1588 aa11.52□□□□□ -0.57
KCNIP4-210ENST00000515786 MRC2Q9UBG0 1479 aa11.5□□□□□ -0.57
KCNIP4-210ENST00000515786 WDR62O43379 1518 aa11.5□□□□□ -0.57
KCNIP4-210ENST00000515786 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
KCNIP4-210ENST00000515786 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
KCNIP4-210ENST00000515786 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
KCNIP4-210ENST00000515786 RIMBP3CA6NJZ7 1639 aa11.48□□□□□ -0.57
KCNIP4-210ENST00000515786 RIMBP3BA6NNM3 1639 aa11.48□□□□□ -0.57
KCNIP4-210ENST00000515786 RIMBP3Q9UFD9 1639 aa11.48□□□□□ -0.57
KCNIP4-210ENST00000515786 CYB5RLQ6IPT4 315 aa11.46□□□□□ -0.57
KCNIP4-210ENST00000515786 PITPNM1O00562 1244 aa11.43□□□□□ -0.58
KCNIP4-210ENST00000515786 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
KCNIP4-210ENST00000515786 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms