RNA–Protein interactions for RNA: ENST00000515580.1

GCLC-212, Transcript of glutamate-cysteine ligase catalytic subunit, humanhuman

TSL 1 (best)

Gene GCLC, Length 2,132 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLC-212ENST00000515580 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
GCLC-212ENST00000515580 SLC24A1O60721 1099 aa18.1■□□□□ 0.49
GCLC-212ENST00000515580 CCDC180Q9P1Z9 1646 aa17.99■□□□□ 0.47
GCLC-212ENST00000515580 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
GCLC-212ENST00000515580 ABCC9O60706 1549 aa17.38■□□□□ 0.37
GCLC-212ENST00000515580 ZCCHC6Q5VYS8 1495 aaKnown RBP17.2■□□□□ 0.34
GCLC-212ENST00000515580 DCAF8L2P0C7V8 631 aa17.18■□□□□ 0.34
GCLC-212ENST00000515580 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
GCLC-212ENST00000515580 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
GCLC-212ENST00000515580 NACADO15069 1562 aa16.85■□□□□ 0.29
GCLC-212ENST00000515580 MYO15BQ96JP2 1530 aa16.84■□□□□ 0.29
GCLC-212ENST00000515580 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
GCLC-212ENST00000515580 SHROOM4Q9ULL8 1493 aa16.67■□□□□ 0.26
GCLC-212ENST00000515580 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
GCLC-212ENST00000515580 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
GCLC-212ENST00000515580 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
GCLC-212ENST00000515580 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
GCLC-212ENST00000515580 RTN4Q9NQC3 1192 aaKnown RBP16.39■□□□□ 0.21
GCLC-212ENST00000515580 PABPN1Q86U42 306 aaKnown RBP eCLIP16.37■□□□□ 0.21
GCLC-212ENST00000515580 DAXXQ9UER7 740 aaPredicted RBP16.3■□□□□ 0.2
GCLC-212ENST00000515580 BICRAQ9NZM4 1560 aa16.3■□□□□ 0.2
GCLC-212ENST00000515580 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
GCLC-212ENST00000515580 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
GCLC-212ENST00000515580 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
GCLC-212ENST00000515580 PHF23Q9BUL5 403 aaPredicted RBP15.98■□□□□ 0.15
GCLC-212ENST00000515580 KCNA4P22459 653 aa15.91■□□□□ 0.14
GCLC-212ENST00000515580 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
GCLC-212ENST00000515580 MROH2BQ7Z745 1585 aa15.89■□□□□ 0.13
GCLC-212ENST00000515580 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
GCLC-212ENST00000515580 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
GCLC-212ENST00000515580 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
GCLC-212ENST00000515580 SMARCA4P51532 1647 aa15.85■□□□□ 0.13
GCLC-212ENST00000515580 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.13
GCLC-212ENST00000515580 WIZO95785 1651 aa15.73■□□□□ 0.11
GCLC-212ENST00000515580 ATAD2BQ9ULI0 1458 aa15.68■□□□□ 0.1
GCLC-212ENST00000515580 CC2D2AQ9P2K1 1620 aa15.68■□□□□ 0.1
GCLC-212ENST00000515580 PRKCSHP14314 528 aaPredicted RBP15.67■□□□□ 0.1
GCLC-212ENST00000515580 SMARCA2P51531 1590 aa15.64■□□□□ 0.09
GCLC-212ENST00000515580 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
GCLC-212ENST00000515580 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
GCLC-212ENST00000515580 BAZ1BQ9UIG0 1483 aaKnown RBP15.58■□□□□ 0.08
GCLC-212ENST00000515580 NCAPD3P42695 1498 aa15.57■□□□□ 0.08
GCLC-212ENST00000515580 TOP2AP11388 1531 aaKnown RBP15.55■□□□□ 0.08
GCLC-212ENST00000515580 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
GCLC-212ENST00000515580 ARXQ96QS3 562 aa15.44■□□□□ 0.06
GCLC-212ENST00000515580 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
GCLC-212ENST00000515580 TIMELESSQ9UNS1 1208 aa15.33■□□□□ 0.04
GCLC-212ENST00000515580 APLP2Q06481 763 aa15.32■□□□□ 0.04
GCLC-212ENST00000515580 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
GCLC-212ENST00000515580 PELP1Q8IZL8 1130 aaKnown RBP15.2■□□□□ 0.02
GCLC-212ENST00000515580 CADPSQ9ULU8 1353 aa15.18■□□□□ 0.02
GCLC-212ENST00000515580 TAOK2Q9UL54 1235 aa15.18■□□□□ 0.02
GCLC-212ENST00000515580 NESP48681 1621 aa15.17■□□□□ 0.02
GCLC-212ENST00000515580 CFTRP13569 1480 aa15.16■□□□□ 0.02
GCLC-212ENST00000515580 MYT1Q01538 1121 aa15.13■□□□□ 0.01
GCLC-212ENST00000515580 TULP1O00294 542 aaPredicted RBP15.1■□□□□ 0.01
GCLC-212ENST00000515580 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
GCLC-212ENST00000515580 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
GCLC-212ENST00000515580 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
GCLC-212ENST00000515580 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
GCLC-212ENST00000515580 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
GCLC-212ENST00000515580 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
GCLC-212ENST00000515580 BCANQ96GW7 911 aa14.99□□□□□ -0.01
GCLC-212ENST00000515580 PRDM2Q13029 1718 aa14.99□□□□□ -0.01
GCLC-212ENST00000515580 HRCP23327 699 aa14.96□□□□□ -0.01
GCLC-212ENST00000515580 HOMEZQ8IX15 550 aa14.96□□□□□ -0.01
GCLC-212ENST00000515580 CEP164Q9UPV0 1460 aa14.94□□□□□ -0.02
GCLC-212ENST00000515580 WRNQ14191 1432 aaPredicted RBP eCLIP14.93□□□□□ -0.02
GCLC-212ENST00000515580 RANGAP1P46060 587 aaPredicted RBP14.93□□□□□ -0.02
GCLC-212ENST00000515580 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
GCLC-212ENST00000515580 KIF21AQ7Z4S6 1674 aa14.93□□□□□ -0.02
GCLC-212ENST00000515580 TPRNQ4KMQ1 711 aa14.92□□□□□ -0.02
GCLC-212ENST00000515580 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
GCLC-212ENST00000515580 CUX1P39880 1505 aa14.87□□□□□ -0.03
GCLC-212ENST00000515580 SYNJ1O43426 1573 aa14.87□□□□□ -0.03
GCLC-212ENST00000515580 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
GCLC-212ENST00000515580 MRC2Q9UBG0 1479 aa14.82□□□□□ -0.04
GCLC-212ENST00000515580 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
GCLC-212ENST00000515580 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
GCLC-212ENST00000515580 DNMBPQ6XZF7 1577 aa14.8□□□□□ -0.04
GCLC-212ENST00000515580 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
GCLC-212ENST00000515580 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
GCLC-212ENST00000515580 PLCB2Q00722 1185 aa14.76□□□□□ -0.05
GCLC-212ENST00000515580 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
GCLC-212ENST00000515580 WDR62O43379 1518 aa14.73□□□□□ -0.05
GCLC-212ENST00000515580 POLA1P09884 1462 aaPredicted RBP14.72□□□□□ -0.05
GCLC-212ENST00000515580 FAM9AQ8IZU1 332 aaPredicted RBP14.71□□□□□ -0.06
GCLC-212ENST00000515580 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
GCLC-212ENST00000515580 SOGA1O94964 1423 aa14.68□□□□□ -0.06
GCLC-212ENST00000515580 KLHL34Q8N239 644 aa14.68□□□□□ -0.06
GCLC-212ENST00000515580 GTF3C3Q9Y5Q9 886 aa14.66□□□□□ -0.06
GCLC-212ENST00000515580 CUX2O14529 1486 aa14.65□□□□□ -0.06
GCLC-212ENST00000515580 RUSC2Q8N2Y8 1516 aa14.65□□□□□ -0.06
GCLC-212ENST00000515580 PODXL2Q9NZ53 605 aa14.63□□□□□ -0.07
GCLC-212ENST00000515580 HAP1P54257 671 aaPredicted RBP14.62□□□□□ -0.07
GCLC-212ENST00000515580 TDRD9Q8NDG6 1382 aaKnown RBP14.6□□□□□ -0.07
GCLC-212ENST00000515580 ABCA10Q8WWZ4 1543 aa14.6□□□□□ -0.07
GCLC-212ENST00000515580 IFT140Q96RY7 1462 aa14.59□□□□□ -0.07
GCLC-212ENST00000515580 TARBP1Q13395 1621 aaKnown RBP14.59□□□□□ -0.07
GCLC-212ENST00000515580 KIF27Q86VH2 1401 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms