RNA–Protein interactions for RNA: ENST00000514900.5

EFCAB12-205, Transcript of EF-hand calcium binding domain 12, humanhuman

TSL 2

Gene EFCAB12, Length 3,249 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB12-205ENST00000514900 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
EFCAB12-205ENST00000514900 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
EFCAB12-205ENST00000514900 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.77
EFCAB12-205ENST00000514900 HRCP23327 699 aa19.83■□□□□ 0.76
EFCAB12-205ENST00000514900 PCGF6Q9BYE7 350 aa19.53■□□□□ 0.72
EFCAB12-205ENST00000514900 MYO15BQ96JP2 1530 aa19.5■□□□□ 0.71
EFCAB12-205ENST00000514900 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
EFCAB12-205ENST00000514900 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
EFCAB12-205ENST00000514900 ZCCHC6Q5VYS8 1495 aaKnown RBP19.12■□□□□ 0.65
EFCAB12-205ENST00000514900 DCAF1Q9Y4B6 1507 aa19.03■□□□□ 0.64
EFCAB12-205ENST00000514900 LOC105371045A0A1W2PR82 267 aa19■□□□□ 0.63
EFCAB12-205ENST00000514900 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
EFCAB12-205ENST00000514900 TRIM26Q12899 539 aaPredicted RBP18.9■□□□□ 0.62
EFCAB12-205ENST00000514900 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
EFCAB12-205ENST00000514900 CCDC180Q9P1Z9 1646 aa18.76■□□□□ 0.59
EFCAB12-205ENST00000514900 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
EFCAB12-205ENST00000514900 ZEB1P37275 1124 aaPredicted RBP18.69■□□□□ 0.58
EFCAB12-205ENST00000514900 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
EFCAB12-205ENST00000514900 TRIM41Q8WV44 630 aa18.33■□□□□ 0.53
EFCAB12-205ENST00000514900 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
EFCAB12-205ENST00000514900 ACIN1Q9UKV3 1341 aaKnown RBP18.28■□□□□ 0.52
EFCAB12-205ENST00000514900 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
EFCAB12-205ENST00000514900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.15■□□□□ 0.5
EFCAB12-205ENST00000514900 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
EFCAB12-205ENST00000514900 ABCC9O60706 1549 aa18.14■□□□□ 0.49
EFCAB12-205ENST00000514900 CCER1Q8TC90 406 aaPredicted RBP18.11■□□□□ 0.49
EFCAB12-205ENST00000514900 MYT1Q01538 1121 aa18.11■□□□□ 0.49
EFCAB12-205ENST00000514900 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
EFCAB12-205ENST00000514900 CENPBP07199 599 aaPredicted RBP18.08■□□□□ 0.48
EFCAB12-205ENST00000514900 DIEXFQ68CQ4 756 aaKnown RBP18.06■□□□□ 0.48
EFCAB12-205ENST00000514900 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
EFCAB12-205ENST00000514900 SCRIBQ14160 1630 aa17.88■□□□□ 0.45
EFCAB12-205ENST00000514900 TTBK1Q5TCY1 1321 aaPredicted RBP17.84■□□□□ 0.45
EFCAB12-205ENST00000514900 YTHDC1Q96MU7 727 aaKnown RBP17.79■□□□□ 0.44
EFCAB12-205ENST00000514900 ZNF316A6NFI3 1004 aaPredicted RBP17.73■□□□□ 0.43
EFCAB12-205ENST00000514900 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
EFCAB12-205ENST00000514900 MIER1Q8N108 512 aa17.61■□□□□ 0.41
EFCAB12-205ENST00000514900 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
EFCAB12-205ENST00000514900 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
EFCAB12-205ENST00000514900 WIZO95785 1651 aa17.54■□□□□ 0.4
EFCAB12-205ENST00000514900 CEP162Q5TB80 1403 aa17.54■□□□□ 0.4
EFCAB12-205ENST00000514900 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
EFCAB12-205ENST00000514900 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
EFCAB12-205ENST00000514900 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
EFCAB12-205ENST00000514900 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
EFCAB12-205ENST00000514900 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
EFCAB12-205ENST00000514900 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
EFCAB12-205ENST00000514900 SOGA1O94964 1423 aa17.38■□□□□ 0.37
EFCAB12-205ENST00000514900 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
EFCAB12-205ENST00000514900 CSRNP3Q8WYN3 585 aa17.34■□□□□ 0.37
EFCAB12-205ENST00000514900 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
EFCAB12-205ENST00000514900 RUSC2Q8N2Y8 1516 aa17.28■□□□□ 0.36
EFCAB12-205ENST00000514900 NACADO15069 1562 aa17.22■□□□□ 0.35
EFCAB12-205ENST00000514900 EEA1Q15075 1411 aa17.22■□□□□ 0.35
EFCAB12-205ENST00000514900 GOLGA3Q08378 1498 aa17.21■□□□□ 0.35
EFCAB12-205ENST00000514900 CLSPNQ9HAW4 1339 aa17.2■□□□□ 0.34
EFCAB12-205ENST00000514900 TSHZ2Q9NRE2 1034 aa17.18■□□□□ 0.34
EFCAB12-205ENST00000514900 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
EFCAB12-205ENST00000514900 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
EFCAB12-205ENST00000514900 APLP2Q06481 763 aa17.14■□□□□ 0.33
EFCAB12-205ENST00000514900 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
EFCAB12-205ENST00000514900 CLIP1P30622 1438 aa17.09■□□□□ 0.33
EFCAB12-205ENST00000514900 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
EFCAB12-205ENST00000514900 VPS8Q8N3P4 1428 aa17.05■□□□□ 0.32
EFCAB12-205ENST00000514900 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
EFCAB12-205ENST00000514900 BCL11AQ9H165 835 aa17.02■□□□□ 0.32
EFCAB12-205ENST00000514900 DHX57Q6P158 1386 aaKnown RBP17.01■□□□□ 0.31
EFCAB12-205ENST00000514900 SMARCA4P51532 1647 aa17.01■□□□□ 0.31
EFCAB12-205ENST00000514900 BCANQ96GW7 911 aa16.99■□□□□ 0.31
EFCAB12-205ENST00000514900 KCNH8Q96L42 1107 aa16.96■□□□□ 0.31
EFCAB12-205ENST00000514900 KIF21BO75037 1637 aa16.95■□□□□ 0.3
EFCAB12-205ENST00000514900 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
EFCAB12-205ENST00000514900 FKBP8Q14318 412 aa16.89■□□□□ 0.29
EFCAB12-205ENST00000514900 SYNJ1O43426 1573 aa16.87■□□□□ 0.29
EFCAB12-205ENST00000514900 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
EFCAB12-205ENST00000514900 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
EFCAB12-205ENST00000514900 RBM19Q9Y4C8 960 aaKnown RBP16.79■□□□□ 0.28
EFCAB12-205ENST00000514900 ITGAEP38570 1179 aa16.79■□□□□ 0.28
EFCAB12-205ENST00000514900 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
EFCAB12-205ENST00000514900 NEFLP07196 543 aa16.75■□□□□ 0.27
EFCAB12-205ENST00000514900 RRBP1Q9P2E9 1410 aaKnown RBP16.71■□□□□ 0.27
EFCAB12-205ENST00000514900 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
EFCAB12-205ENST00000514900 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
EFCAB12-205ENST00000514900 CCNB3Q8WWL7 1395 aa16.68■□□□□ 0.26
EFCAB12-205ENST00000514900 CUX2O14529 1486 aa16.66■□□□□ 0.26
EFCAB12-205ENST00000514900 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
EFCAB12-205ENST00000514900 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.26
EFCAB12-205ENST00000514900 RAB3GAP2Q9H2M9 1393 aa16.64■□□□□ 0.25
EFCAB12-205ENST00000514900 MSH5O43196 834 aa16.62■□□□□ 0.25
EFCAB12-205ENST00000514900 HIRIP3Q9BW71 556 aaPredicted RBP16.62■□□□□ 0.25
EFCAB12-205ENST00000514900 SIN3AQ96ST3 1273 aa16.61■□□□□ 0.25
EFCAB12-205ENST00000514900 MAPKBP1O60336 1514 aa16.61■□□□□ 0.25
EFCAB12-205ENST00000514900 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
EFCAB12-205ENST00000514900 WDR97A6NE52 1622 aa16.58■□□□□ 0.25
EFCAB12-205ENST00000514900 PRXQ9BXM0 1461 aa16.57■□□□□ 0.24
EFCAB12-205ENST00000514900 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
EFCAB12-205ENST00000514900 ANP32CO43423 234 aa16.57■□□□□ 0.24
EFCAB12-205ENST00000514900 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
EFCAB12-205ENST00000514900 CCER2I3L3R5 266 aa16.55■□□□□ 0.24
EFCAB12-205ENST00000514900 TOP2BQ02880 1626 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms