RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 AEBP2Q6ZN18 517 aaPredicted RBP28.03■■■□□ 2.08
CDK7-210ENST00000513629 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
CDK7-210ENST00000513629 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
CDK7-210ENST00000513629 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
CDK7-210ENST00000513629 NISCHQ9Y2I1 1504 aa23.2■■□□□ 1.3
CDK7-210ENST00000513629 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
CDK7-210ENST00000513629 FOXD1Q16676 465 aa21.99■■□□□ 1.11
CDK7-210ENST00000513629 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
CDK7-210ENST00000513629 ADRA2BP18089 450 aa21.36■■□□□ 1.01
CDK7-210ENST00000513629 ABCC9O60706 1549 aa20.81■□□□□ 0.92
CDK7-210ENST00000513629 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
CDK7-210ENST00000513629 PIAS4Q8N2W9 510 aaPredicted RBP20.79■□□□□ 0.92
CDK7-210ENST00000513629 MSH5O43196 834 aa20.15■□□□□ 0.82
CDK7-210ENST00000513629 PPP4R3CPQ6ZMV5 832 aa19.9■□□□□ 0.78
CDK7-210ENST00000513629 RB1CC1Q8TDY2 1594 aa19.79■□□□□ 0.76
CDK7-210ENST00000513629 KCNA4P22459 653 aa19.75■□□□□ 0.75
CDK7-210ENST00000513629 NACADO15069 1562 aa19.66■□□□□ 0.74
CDK7-210ENST00000513629 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
CDK7-210ENST00000513629 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
CDK7-210ENST00000513629 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
CDK7-210ENST00000513629 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
CDK7-210ENST00000513629 MYO15BQ96JP2 1530 aa19.39■□□□□ 0.69
CDK7-210ENST00000513629 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDK7-210ENST00000513629 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
CDK7-210ENST00000513629 MAPK8IP2Q13387 824 aaPredicted RBP19.3■□□□□ 0.68
CDK7-210ENST00000513629 CNKSR2Q8WXI2 1034 aa19.27■□□□□ 0.68
CDK7-210ENST00000513629 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.67
CDK7-210ENST00000513629 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
CDK7-210ENST00000513629 NPM3O75607 178 aaKnown RBP19.18■□□□□ 0.66
CDK7-210ENST00000513629 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
CDK7-210ENST00000513629 SCRIBQ14160 1630 aa19■□□□□ 0.63
CDK7-210ENST00000513629 DMRT2Q9Y5R5 561 aa18.98■□□□□ 0.63
CDK7-210ENST00000513629 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
CDK7-210ENST00000513629 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
CDK7-210ENST00000513629 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.6
CDK7-210ENST00000513629 CC2D2AQ9P2K1 1620 aa18.79■□□□□ 0.6
CDK7-210ENST00000513629 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
CDK7-210ENST00000513629 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
CDK7-210ENST00000513629 HOXD11P31277 338 aaPredicted RBP18.7■□□□□ 0.58
CDK7-210ENST00000513629 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
CDK7-210ENST00000513629 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
CDK7-210ENST00000513629 ZBTB22O15209 634 aa18.21■□□□□ 0.51
CDK7-210ENST00000513629 NCAPD3P42695 1498 aa18.14■□□□□ 0.5
CDK7-210ENST00000513629 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
CDK7-210ENST00000513629 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
CDK7-210ENST00000513629 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
CDK7-210ENST00000513629 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
CDK7-210ENST00000513629 SMARCA2P51531 1590 aa18.06■□□□□ 0.48
CDK7-210ENST00000513629 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
CDK7-210ENST00000513629 HMGXB3Q12766 1538 aa18.03■□□□□ 0.48
CDK7-210ENST00000513629 BAZ1AQ9NRL2 1556 aaPredicted RBP18.02■□□□□ 0.48
CDK7-210ENST00000513629 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
CDK7-210ENST00000513629 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
CDK7-210ENST00000513629 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
CDK7-210ENST00000513629 CUX2O14529 1486 aa17.91■□□□□ 0.46
CDK7-210ENST00000513629 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
CDK7-210ENST00000513629 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
CDK7-210ENST00000513629 NESP48681 1621 aa17.88■□□□□ 0.45
CDK7-210ENST00000513629 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.44
CDK7-210ENST00000513629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDK7-210ENST00000513629 LAMC3Q9Y6N6 1575 aa17.74■□□□□ 0.43
CDK7-210ENST00000513629 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
CDK7-210ENST00000513629 MYCNP04198 464 aaPredicted RBP17.7■□□□□ 0.42
CDK7-210ENST00000513629 WIZO95785 1651 aa17.67■□□□□ 0.42
CDK7-210ENST00000513629 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.42
CDK7-210ENST00000513629 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.41
CDK7-210ENST00000513629 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
CDK7-210ENST00000513629 U3KPZ7 1027 aaPredicted RBP17.56■□□□□ 0.4
CDK7-210ENST00000513629 RSF1Q96T23 1441 aaPredicted RBP17.53■□□□□ 0.4
CDK7-210ENST00000513629 MRC2Q9UBG0 1479 aa17.5■□□□□ 0.39
CDK7-210ENST00000513629 WDR62O43379 1518 aa17.47■□□□□ 0.39
CDK7-210ENST00000513629 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
CDK7-210ENST00000513629 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
CDK7-210ENST00000513629 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
CDK7-210ENST00000513629 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
CDK7-210ENST00000513629 CFTRP13569 1480 aa17.42■□□□□ 0.38
CDK7-210ENST00000513629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.37
CDK7-210ENST00000513629 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
CDK7-210ENST00000513629 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
CDK7-210ENST00000513629 RNF39Q9H2S5 420 aa17.31■□□□□ 0.36
CDK7-210ENST00000513629 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
CDK7-210ENST00000513629 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
CDK7-210ENST00000513629 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
CDK7-210ENST00000513629 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
CDK7-210ENST00000513629 APLP2Q06481 763 aa17.14■□□□□ 0.33
CDK7-210ENST00000513629 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
CDK7-210ENST00000513629 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
CDK7-210ENST00000513629 TOPBP1Q92547 1522 aa17.1■□□□□ 0.33
CDK7-210ENST00000513629 IFT140Q96RY7 1462 aa17.08■□□□□ 0.32
CDK7-210ENST00000513629 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
CDK7-210ENST00000513629 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
CDK7-210ENST00000513629 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
CDK7-210ENST00000513629 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
CDK7-210ENST00000513629 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
CDK7-210ENST00000513629 EIF4G3O43432 1585 aaKnown RBP16.98■□□□□ 0.31
CDK7-210ENST00000513629 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
CDK7-210ENST00000513629 TARBP1Q13395 1621 aaKnown RBP16.93■□□□□ 0.3
CDK7-210ENST00000513629 ZNF219Q9P2Y4 722 aaPredicted RBP16.91■□□□□ 0.3
CDK7-210ENST00000513629 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.37e-6■■□□□ 12.2
CDK7-210ENST00000513629 CAPN15O75808 1086 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 277.6 ms