RNA–Protein interactions for RNA: ENST00000506725.1

SLC1A3-209, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 1,137 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-209ENST00000506725 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
SLC1A3-209ENST00000506725 AEBP2Q6ZN18 517 aaPredicted RBP27.8■■■□□ 2.04
SLC1A3-209ENST00000506725 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
SLC1A3-209ENST00000506725 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
SLC1A3-209ENST00000506725 PLPPR3Q6T4P5 718 aa23.07■■□□□ 1.28
SLC1A3-209ENST00000506725 NISCHQ9Y2I1 1504 aa22.3■■□□□ 1.16
SLC1A3-209ENST00000506725 ADRA2BP18089 450 aa21.63■■□□□ 1.05
SLC1A3-209ENST00000506725 FOXD1Q16676 465 aa21.63■■□□□ 1.05
SLC1A3-209ENST00000506725 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
SLC1A3-209ENST00000506725 ABCC9O60706 1549 aa21.49■■□□□ 1.03
SLC1A3-209ENST00000506725 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
SLC1A3-209ENST00000506725 KCNA4P22459 653 aa20.99■□□□□ 0.95
SLC1A3-209ENST00000506725 PIAS4Q8N2W9 510 aaPredicted RBP20.56■□□□□ 0.88
SLC1A3-209ENST00000506725 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
SLC1A3-209ENST00000506725 EHMT2Q96KQ7 1210 aa20.51■□□□□ 0.87
SLC1A3-209ENST00000506725 PPP4R3CPQ6ZMV5 832 aa20.45■□□□□ 0.86
SLC1A3-209ENST00000506725 DNAJC5Q9H3Z4 198 aa20.19■□□□□ 0.82
SLC1A3-209ENST00000506725 NCBP3Q53F19 620 aaKnown RBP20.12■□□□□ 0.81
SLC1A3-209ENST00000506725 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
SLC1A3-209ENST00000506725 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.81
SLC1A3-209ENST00000506725 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
SLC1A3-209ENST00000506725 NPM3O75607 178 aaKnown RBP19.9■□□□□ 0.78
SLC1A3-209ENST00000506725 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
SLC1A3-209ENST00000506725 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
SLC1A3-209ENST00000506725 NACADO15069 1562 aa19.67■□□□□ 0.74
SLC1A3-209ENST00000506725 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
SLC1A3-209ENST00000506725 UNC13AQ9UPW8 1703 aa19.57■□□□□ 0.72
SLC1A3-209ENST00000506725 MSH5O43196 834 aa19.55■□□□□ 0.72
SLC1A3-209ENST00000506725 CECR2Q9BXF3 1484 aa19.51■□□□□ 0.71
SLC1A3-209ENST00000506725 BICRAQ9NZM4 1560 aa19.43■□□□□ 0.7
SLC1A3-209ENST00000506725 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
SLC1A3-209ENST00000506725 ZBTB22O15209 634 aa19.36■□□□□ 0.69
SLC1A3-209ENST00000506725 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
SLC1A3-209ENST00000506725 MAPK8IP2Q13387 824 aaPredicted RBP19.28■□□□□ 0.68
SLC1A3-209ENST00000506725 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
SLC1A3-209ENST00000506725 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
SLC1A3-209ENST00000506725 RNF216Q9NWF9 866 aaPredicted RBP19.08■□□□□ 0.64
SLC1A3-209ENST00000506725 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
SLC1A3-209ENST00000506725 CUX2O14529 1486 aa19.05■□□□□ 0.64
SLC1A3-209ENST00000506725 FOXD4L1Q9NU39 408 aa19.04■□□□□ 0.64
SLC1A3-209ENST00000506725 TRIM41Q8WV44 630 aa18.86■□□□□ 0.61
SLC1A3-209ENST00000506725 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
SLC1A3-209ENST00000506725 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
SLC1A3-209ENST00000506725 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
SLC1A3-209ENST00000506725 SLC4A2P04920 1241 aa18.6■□□□□ 0.57
SLC1A3-209ENST00000506725 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
SLC1A3-209ENST00000506725 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
SLC1A3-209ENST00000506725 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
SLC1A3-209ENST00000506725 MYCNP04198 464 aaPredicted RBP18.33■□□□□ 0.52
SLC1A3-209ENST00000506725 ATXN8OSP0DMR3 200 aa18.31■□□□□ 0.52
SLC1A3-209ENST00000506725 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
SLC1A3-209ENST00000506725 NCAPD3P42695 1498 aa18.13■□□□□ 0.49
SLC1A3-209ENST00000506725 NESP48681 1621 aa18.12■□□□□ 0.49
SLC1A3-209ENST00000506725 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
SLC1A3-209ENST00000506725 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
SLC1A3-209ENST00000506725 OSCARQ8IYS5 282 aa17.98■□□□□ 0.47
SLC1A3-209ENST00000506725 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
SLC1A3-209ENST00000506725 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
SLC1A3-209ENST00000506725 FKBP8Q14318 412 aa17.93■□□□□ 0.46
SLC1A3-209ENST00000506725 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
SLC1A3-209ENST00000506725 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
SLC1A3-209ENST00000506725 RTN4Q9NQC3 1192 aaKnown RBP17.89■□□□□ 0.45
SLC1A3-209ENST00000506725 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.45
SLC1A3-209ENST00000506725 DCAF8L1A6NGE4 600 aa17.87■□□□□ 0.45
SLC1A3-209ENST00000506725 AMER1Q5JTC6 1135 aaPredicted RBP17.87■□□□□ 0.45
SLC1A3-209ENST00000506725 RIMBP3CA6NJZ7 1639 aa17.84■□□□□ 0.45
SLC1A3-209ENST00000506725 RIMBP3BA6NNM3 1639 aa17.84■□□□□ 0.45
SLC1A3-209ENST00000506725 RIMBP3Q9UFD9 1639 aa17.84■□□□□ 0.45
SLC1A3-209ENST00000506725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.83■□□□□ 0.44
SLC1A3-209ENST00000506725 ATF5Q9Y2D1 282 aaPredicted RBP17.83■□□□□ 0.44
SLC1A3-209ENST00000506725 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
SLC1A3-209ENST00000506725 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
SLC1A3-209ENST00000506725 WDR62O43379 1518 aa17.74■□□□□ 0.43
SLC1A3-209ENST00000506725 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
SLC1A3-209ENST00000506725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
SLC1A3-209ENST00000506725 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
SLC1A3-209ENST00000506725 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
SLC1A3-209ENST00000506725 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
SLC1A3-209ENST00000506725 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
SLC1A3-209ENST00000506725 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
SLC1A3-209ENST00000506725 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
SLC1A3-209ENST00000506725 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
SLC1A3-209ENST00000506725 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
SLC1A3-209ENST00000506725 CEP164Q9UPV0 1460 aa17.49■□□□□ 0.39
SLC1A3-209ENST00000506725 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
SLC1A3-209ENST00000506725 ILDR1Q86SU0 546 aaPredicted RBP17.44■□□□□ 0.38
SLC1A3-209ENST00000506725 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
SLC1A3-209ENST00000506725 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
SLC1A3-209ENST00000506725 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
SLC1A3-209ENST00000506725 APLP2Q06481 763 aa17.3■□□□□ 0.36
SLC1A3-209ENST00000506725 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.35
SLC1A3-209ENST00000506725 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
SLC1A3-209ENST00000506725 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
SLC1A3-209ENST00000506725 CHD1O14646 1710 aa17.17■□□□□ 0.34
SLC1A3-209ENST00000506725 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
SLC1A3-209ENST00000506725 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
SLC1A3-209ENST00000506725 MKRN4PQ13434 485 aaPredicted RBP17.1■□□□□ 0.33
SLC1A3-209ENST00000506725 CFTRP13569 1480 aa17.1■□□□□ 0.33
SLC1A3-209ENST00000506725 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
SLC1A3-209ENST00000506725 SPDYE4A6NLX3 237 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms