RNA–Protein interactions for RNA: ENST00000506449.1

TRPC3-204, Transcript of transient receptor potential cation channel subfamily C member 3, humanhuman

TSL 1 (best)

Gene TRPC3, Length 2,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC3-204ENST00000506449 NISCHQ9Y2I1 1504 aa23.6■■□□□ 1.37
TRPC3-204ENST00000506449 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
TRPC3-204ENST00000506449 SHROOM4Q9ULL8 1493 aa20.31■□□□□ 0.84
TRPC3-204ENST00000506449 CCDC180Q9P1Z9 1646 aa20■□□□□ 0.79
TRPC3-204ENST00000506449 ZCCHC6Q5VYS8 1495 aaKnown RBP19.81■□□□□ 0.76
TRPC3-204ENST00000506449 SUPT5HO00267 1087 aaKnown RBP19.67■□□□□ 0.74
TRPC3-204ENST00000506449 HRCP23327 699 aa19.56■□□□□ 0.72
TRPC3-204ENST00000506449 ABCC9O60706 1549 aa19.53■□□□□ 0.72
TRPC3-204ENST00000506449 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
TRPC3-204ENST00000506449 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
TRPC3-204ENST00000506449 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
TRPC3-204ENST00000506449 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
TRPC3-204ENST00000506449 PELP1Q8IZL8 1130 aaKnown RBP19■□□□□ 0.63
TRPC3-204ENST00000506449 MYO15BQ96JP2 1530 aa18.93■□□□□ 0.62
TRPC3-204ENST00000506449 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
TRPC3-204ENST00000506449 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
TRPC3-204ENST00000506449 NACADO15069 1562 aa18.73■□□□□ 0.59
TRPC3-204ENST00000506449 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
TRPC3-204ENST00000506449 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
TRPC3-204ENST00000506449 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
TRPC3-204ENST00000506449 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
TRPC3-204ENST00000506449 MROH2BQ7Z745 1585 aa18.45■□□□□ 0.54
TRPC3-204ENST00000506449 TRIM26Q12899 539 aaPredicted RBP18.41■□□□□ 0.54
TRPC3-204ENST00000506449 LOC105371045A0A1W2PR82 267 aa18.41■□□□□ 0.54
TRPC3-204ENST00000506449 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
TRPC3-204ENST00000506449 WIZO95785 1651 aa18.3■□□□□ 0.52
TRPC3-204ENST00000506449 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
TRPC3-204ENST00000506449 FAM9AQ8IZU1 332 aaPredicted RBP18.29■□□□□ 0.52
TRPC3-204ENST00000506449 ZEB1P37275 1124 aaPredicted RBP18.28■□□□□ 0.52
TRPC3-204ENST00000506449 MYT1Q01538 1121 aa18.26■□□□□ 0.51
TRPC3-204ENST00000506449 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
TRPC3-204ENST00000506449 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
TRPC3-204ENST00000506449 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
TRPC3-204ENST00000506449 ACIN1Q9UKV3 1341 aaKnown RBP18.08■□□□□ 0.49
TRPC3-204ENST00000506449 NEUROD1Q13562 356 aa18.06■□□□□ 0.48
TRPC3-204ENST00000506449 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
TRPC3-204ENST00000506449 GTF3C3Q9Y5Q9 886 aa17.95■□□□□ 0.46
TRPC3-204ENST00000506449 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
TRPC3-204ENST00000506449 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
TRPC3-204ENST00000506449 ABCC8Q09428 1581 aa17.83■□□□□ 0.44
TRPC3-204ENST00000506449 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
TRPC3-204ENST00000506449 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
TRPC3-204ENST00000506449 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
TRPC3-204ENST00000506449 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
TRPC3-204ENST00000506449 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
TRPC3-204ENST00000506449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
TRPC3-204ENST00000506449 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
TRPC3-204ENST00000506449 CCER1Q8TC90 406 aaPredicted RBP17.61■□□□□ 0.41
TRPC3-204ENST00000506449 SOGA1O94964 1423 aa17.6■□□□□ 0.41
TRPC3-204ENST00000506449 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.4
TRPC3-204ENST00000506449 RUSC2Q8N2Y8 1516 aa17.57■□□□□ 0.4
TRPC3-204ENST00000506449 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
TRPC3-204ENST00000506449 RANGAP1P46060 587 aaPredicted RBP17.56■□□□□ 0.4
TRPC3-204ENST00000506449 PEG3Q9GZU2 1588 aa17.55■□□□□ 0.4
TRPC3-204ENST00000506449 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
TRPC3-204ENST00000506449 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
TRPC3-204ENST00000506449 YTHDC1Q96MU7 727 aaKnown RBP17.46■□□□□ 0.39
TRPC3-204ENST00000506449 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
TRPC3-204ENST00000506449 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
TRPC3-204ENST00000506449 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
TRPC3-204ENST00000506449 CC2D2AQ9P2K1 1620 aa17.37■□□□□ 0.37
TRPC3-204ENST00000506449 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
TRPC3-204ENST00000506449 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
TRPC3-204ENST00000506449 MIER1Q8N108 512 aa17.26■□□□□ 0.35
TRPC3-204ENST00000506449 NESP48681 1621 aa17.24■□□□□ 0.35
TRPC3-204ENST00000506449 CFTRP13569 1480 aa17.2■□□□□ 0.34
TRPC3-204ENST00000506449 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
TRPC3-204ENST00000506449 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
TRPC3-204ENST00000506449 CEP162Q5TB80 1403 aa17.18■□□□□ 0.34
TRPC3-204ENST00000506449 CUX1P39880 1505 aa17.17■□□□□ 0.34
TRPC3-204ENST00000506449 RAPGEF2Q9Y4G8 1499 aa17.13■□□□□ 0.33
TRPC3-204ENST00000506449 ANP32EQ9BTT0 268 aa17.1■□□□□ 0.33
TRPC3-204ENST00000506449 TNIKQ9UKE5 1360 aa17.08■□□□□ 0.32
TRPC3-204ENST00000506449 TOP2BQ02880 1626 aa17.08■□□□□ 0.32
TRPC3-204ENST00000506449 GOLGA3Q08378 1498 aa17.06■□□□□ 0.32
TRPC3-204ENST00000506449 SUPT16HQ9Y5B9 1047 aaKnown RBP17.05■□□□□ 0.32
TRPC3-204ENST00000506449 EEA1Q15075 1411 aa17.04■□□□□ 0.32
TRPC3-204ENST00000506449 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
TRPC3-204ENST00000506449 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
TRPC3-204ENST00000506449 CUX2O14529 1486 aa17■□□□□ 0.31
TRPC3-204ENST00000506449 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
TRPC3-204ENST00000506449 RAD54L2Q9Y4B4 1467 aa16.99■□□□□ 0.31
TRPC3-204ENST00000506449 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
TRPC3-204ENST00000506449 CLIP1P30622 1438 aa16.97■□□□□ 0.31
TRPC3-204ENST00000506449 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
TRPC3-204ENST00000506449 KIF27Q86VH2 1401 aa16.95■□□□□ 0.3
TRPC3-204ENST00000506449 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
TRPC3-204ENST00000506449 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
TRPC3-204ENST00000506449 IGF1RP08069 1367 aa16.9■□□□□ 0.3
TRPC3-204ENST00000506449 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.3
TRPC3-204ENST00000506449 ATP1B4Q9UN42 357 aaPredicted RBP16.86■□□□□ 0.29
TRPC3-204ENST00000506449 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
TRPC3-204ENST00000506449 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
TRPC3-204ENST00000506449 KIF21BO75037 1637 aa16.84■□□□□ 0.29
TRPC3-204ENST00000506449 APLP2Q06481 763 aa16.84■□□□□ 0.29
TRPC3-204ENST00000506449 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
TRPC3-204ENST00000506449 TOPBP1Q92547 1522 aa16.83■□□□□ 0.28
TRPC3-204ENST00000506449 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.28
TRPC3-204ENST00000506449 URB2Q14146 1524 aaKnown RBP16.82■□□□□ 0.28
TRPC3-204ENST00000506449 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms