RNA–Protein interactions for RNA: ENST00000503385.1

SGMS2-204, Transcript of sphingomyelin synthase 2, humanhuman

TSL 4

Gene SGMS2, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-204ENST00000503385 AEBP2Q6ZN18 517 aaPredicted RBP27.14■■□□□ 1.94
SGMS2-204ENST00000503385 CHIC1Q5VXU3 224 aa26.46■■□□□ 1.83
SGMS2-204ENST00000503385 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
SGMS2-204ENST00000503385 PHF23Q9BUL5 403 aaPredicted RBP23.16■■□□□ 1.3
SGMS2-204ENST00000503385 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
SGMS2-204ENST00000503385 FOXD1Q16676 465 aa21.47■■□□□ 1.03
SGMS2-204ENST00000503385 ADRA2BP18089 450 aa20.49■□□□□ 0.87
SGMS2-204ENST00000503385 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
SGMS2-204ENST00000503385 NISCHQ9Y2I1 1504 aa20.31■□□□□ 0.84
SGMS2-204ENST00000503385 PIAS4Q8N2W9 510 aaPredicted RBP20.27■□□□□ 0.84
SGMS2-204ENST00000503385 MSH5O43196 834 aa19.98■□□□□ 0.79
SGMS2-204ENST00000503385 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
SGMS2-204ENST00000503385 PPP4R3CPQ6ZMV5 832 aa18.86■□□□□ 0.61
SGMS2-204ENST00000503385 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
SGMS2-204ENST00000503385 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
SGMS2-204ENST00000503385 CCDC180Q9P1Z9 1646 aa18.43■□□□□ 0.54
SGMS2-204ENST00000503385 NCBP3Q53F19 620 aaKnown RBP18.43■□□□□ 0.54
SGMS2-204ENST00000503385 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
SGMS2-204ENST00000503385 ABCC9O60706 1549 aa18.4■□□□□ 0.54
SGMS2-204ENST00000503385 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
SGMS2-204ENST00000503385 KCNA4P22459 653 aa18.19■□□□□ 0.5
SGMS2-204ENST00000503385 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
SGMS2-204ENST00000503385 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
SGMS2-204ENST00000503385 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
SGMS2-204ENST00000503385 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
SGMS2-204ENST00000503385 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
SGMS2-204ENST00000503385 RB1CC1Q8TDY2 1594 aa17.56■□□□□ 0.4
SGMS2-204ENST00000503385 NACADO15069 1562 aa17.37■□□□□ 0.37
SGMS2-204ENST00000503385 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
SGMS2-204ENST00000503385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
SGMS2-204ENST00000503385 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.35
SGMS2-204ENST00000503385 DCAF8L2P0C7V8 631 aa17.11■□□□□ 0.33
SGMS2-204ENST00000503385 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
SGMS2-204ENST00000503385 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
SGMS2-204ENST00000503385 SLC4A2P04920 1241 aa17.02■□□□□ 0.32
SGMS2-204ENST00000503385 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
SGMS2-204ENST00000503385 BICRAQ9NZM4 1560 aa16.96■□□□□ 0.31
SGMS2-204ENST00000503385 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
SGMS2-204ENST00000503385 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
SGMS2-204ENST00000503385 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
SGMS2-204ENST00000503385 ZCCHC6Q5VYS8 1495 aaKnown RBP16.83■□□□□ 0.28
SGMS2-204ENST00000503385 SHROOM4Q9ULL8 1493 aa16.82■□□□□ 0.28
SGMS2-204ENST00000503385 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
SGMS2-204ENST00000503385 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
SGMS2-204ENST00000503385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
SGMS2-204ENST00000503385 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
SGMS2-204ENST00000503385 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
SGMS2-204ENST00000503385 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
SGMS2-204ENST00000503385 ZBTB22O15209 634 aa16.68■□□□□ 0.26
SGMS2-204ENST00000503385 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
SGMS2-204ENST00000503385 APLP2Q06481 763 aa16.65■□□□□ 0.26
SGMS2-204ENST00000503385 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
SGMS2-204ENST00000503385 SAMD1Q6SPF0 538 aaPredicted RBP16.64■□□□□ 0.25
SGMS2-204ENST00000503385 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
SGMS2-204ENST00000503385 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
SGMS2-204ENST00000503385 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
SGMS2-204ENST00000503385 CAPN15O75808 1086 aa16.43■□□□□ 0.22
SGMS2-204ENST00000503385 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
SGMS2-204ENST00000503385 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
SGMS2-204ENST00000503385 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
SGMS2-204ENST00000503385 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
SGMS2-204ENST00000503385 ATF5Q9Y2D1 282 aaPredicted RBP16.16■□□□□ 0.18
SGMS2-204ENST00000503385 DSG3P32926 999 aa16.14■□□□□ 0.17
SGMS2-204ENST00000503385 ABCB7O75027 752 aa16.05■□□□□ 0.16
SGMS2-204ENST00000503385 POLA2Q14181 598 aa15.99■□□□□ 0.15
SGMS2-204ENST00000503385 CUX2O14529 1486 aa15.97■□□□□ 0.15
SGMS2-204ENST00000503385 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
SGMS2-204ENST00000503385 NCAPD3P42695 1498 aa15.96■□□□□ 0.14
SGMS2-204ENST00000503385 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
SGMS2-204ENST00000503385 SMARCA2P51531 1590 aa15.94■□□□□ 0.14
SGMS2-204ENST00000503385 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
SGMS2-204ENST00000503385 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
SGMS2-204ENST00000503385 ATAD2BQ9ULI0 1458 aa15.9■□□□□ 0.14
SGMS2-204ENST00000503385 BAZ1AQ9NRL2 1556 aaPredicted RBP15.83■□□□□ 0.13
SGMS2-204ENST00000503385 ZBTB12Q9Y330 459 aaPredicted RBP15.83■□□□□ 0.12
SGMS2-204ENST00000503385 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
SGMS2-204ENST00000503385 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
SGMS2-204ENST00000503385 NESP48681 1621 aa15.75■□□□□ 0.11
SGMS2-204ENST00000503385 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
SGMS2-204ENST00000503385 LAMC3Q9Y6N6 1575 aa15.72■□□□□ 0.11
SGMS2-204ENST00000503385 FBLN2P98095 1184 aa15.68■□□□□ 0.1
SGMS2-204ENST00000503385 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
SGMS2-204ENST00000503385 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
SGMS2-204ENST00000503385 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.08
SGMS2-204ENST00000503385 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
SGMS2-204ENST00000503385 WIZO95785 1651 aa15.49■□□□□ 0.07
SGMS2-204ENST00000503385 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
SGMS2-204ENST00000503385 MKRN4PQ13434 485 aaPredicted RBP15.47■□□□□ 0.07
SGMS2-204ENST00000503385 WDR62O43379 1518 aa15.46■□□□□ 0.07
SGMS2-204ENST00000503385 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
SGMS2-204ENST00000503385 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
SGMS2-204ENST00000503385 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
SGMS2-204ENST00000503385 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
SGMS2-204ENST00000503385 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.05
SGMS2-204ENST00000503385 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
SGMS2-204ENST00000503385 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
SGMS2-204ENST00000503385 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
SGMS2-204ENST00000503385 TOP2AP11388 1531 aaKnown RBP15.31■□□□□ 0.04
SGMS2-204ENST00000503385 CFTRP13569 1480 aa15.27■□□□□ 0.04
SGMS2-204ENST00000503385 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms